Bpel014748.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- -
- Assembly
- GCA_963991005.1
- Location
- OZ022558.1:27786194-27786760[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-12 6.8e-10 39.8 0.1 1 40 17 56 17 60 0.94 2 2 7.1 1.1e+03 0.8 0.1 12 23 137 149 135 151 0.77
Sequence Information
- Coding Sequence
- atgcctagaaaatatTGTCGAAAATTGTGTAAGCCAAGGGCTGCTTGGACTGAGGAAGCCCTCATAGAGGCAATAGAAAAGGTGCAAAACGGAGAAATTAGTAAAAGAGAAGCAGAAAGGCGATATAAAATTCCAGCAAGAACATTAAGCCGAAGAATAGAAACGGGACAAAGTGAAAAAGGTCGTTTGGGACCAGATTgttgtTTGGGGAATGAAAATGAAAAGCGCTTGGTTCGACACATACACAAATTATCAGATTGCGGTTTCGCGCCTAGTAGATCTGATGTTAGAAGGTTGGCATTTGAATTcgcagaaaaactcaagattcCAAACAAGTTTAATCGTGACACTAGTATGGCAGGTTATGATTGGTTAAAGTCGTTTTTAGAACGCAATCCTGAGTTGTCGGTAAGGCATTCAGAAGGCCTGTCCTTGGCTAGAGCCCAAGGGATGAATAGAGCTGATGTCCGCCTTCTTTGCACTCTTGGAAAGGACTCTAACCGATAA
- Protein Sequence
- MPRKYCRKLCKPRAAWTEEALIEAIEKVQNGEISKREAERRYKIPARTLSRRIETGQSEKGRLGPDCCLGNENEKRLVRHIHKLSDCGFAPSRSDVRRLAFEFAEKLKIPNKFNRDTSMAGYDWLKSFLERNPELSVRHSEGLSLARAQGMNRADVRLLCTLGKDSNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -