Bpel000716.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- -
- Assembly
- GCA_963991005.1
- Location
- CAXDRF010000038.1:1188475-1193422[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 1.9e-06 28.8 0.0 3 43 16 55 14 57 0.92 2 2 2.6e-05 0.0039 18.2 0.0 4 39 827 862 827 867 0.85
Sequence Information
- Coding Sequence
- aTGGGAAAATATAAAAGGACGACCGAGCGAGGGTCCTATACCAAAGCAGCATTAATCGCAGCATTAGATGCAGTTAACAATGGAATGGGCAAAAGGGAGGCAGGAAGACAGTTTAATGTGCCAGAAGCTACTCTCAGACGGCACCTGGAAATAAGAAATGAACACAGGCAGTTAAACTCCAAGTCCTTGGGAAGAGCTCCTGTTTTTACTATTGTCCAGGAAGAGGAACTTGCCAGACATACCCTCAAGTtgggtaaattattttttggtctAACACGTGTAGAACTACGCTGTATTGCTTACGACTATGCCGaggccaacaaaataaaacataactttAATATAGAGAAAAAAATGGCTGGAAAGGACTGGTATGCTAGCTTTATCAGACGAAATCCCACAATAAGCCTTCGAAAACCTGAAGCAACCAGTATTAATAGAATTACAGCATTCAGTAGGGAGGAAGTTAAtcgcatttttgataatttggagAACGTCTTGTCGAAGTATCATTTTGCATCTGATCGGATTTATAACGTTGATGAAAGCGGCATATCGACAGTTCCCAAAGAAAACTCAAAAAGACTGGGTCCAAAAGGCATAAAGCAATTCGGAATTATCGCCTCATGGGAACGAGGTAAGAACGTAACTGTAATATGCGCCATGAGCGCAAGTGGAAACTACATTCCCCCTCTCTTTGTATTTCCAAGAGCAAGGATGTCACCATTGCTAGAAAAAAATGGTCCACGAGAAGCTGTTTACACTTGCACCAAGAACGGTTGGAGTAATGAGCAAGTGTTTTTTCAGTGGTTAAATCATTTCCAAAGTAAAGTCAAGTCTGATGGAAATAATCCTGTTTTACTAATTTTGGACAACCACAGCAGTCATGTCTCACTTCAGATTTATAAgttttgcaaacaacatttcaTAGTGATGCTGAGCTTACCCCCACACACGTCGCACAGACTCCAGCCCTTGGACCTAAGTTTTTTCGGACCTCTGAAAAATGCCTATAGCAGacagtgcaatatttttttaaaaactaaattaaattctgGAGACAGTGATGGTAAGCTATCACATTATGATATCGCTGAAATCTTTAATTTAGCTTATTGTGATACCGCAAATAAGGAGAAGGCCATTTCAGGCTTTCGATCAGCAGGaatatatcccctacaccctggTAAATTTTCAGAAGACGACTTTGCTCCAGCTGAAAATTTATTAAGCCAGGAACATAATGACATGAAAAACATTAATAGGATAAATGAACATCTCACTGCTACAACAGATGAAATTTGTGAGCCACATTCACCTCAGCCATCATGTAGCGGTCTTCAACAAACTGTAAATAACTCATTTTCAGATCATGTTAGCGTTGAAGTTGTTTCACCAGTGCCAGCACCACAGAAGAGAAGAGTTAATCAAAAGAGTAGTCGTGCCAAAcaacattctgaaatattgacggctactcctttgaaaataatactggaagaaaaagaattgaaaaaatcaaagaaaattcaaaaagttaaCGTACAAGccaaaagaaaagtaaaaaaacaagtatttattgAATCTGACAGTGAAAGTGAAGGAAGCTTGAATGGAAAGGACCTATGCGATGATGATGAACTAGACGatcttgatgatgatgatgatgatgttaaaaactATTGCAATATTTGTGCAGAGCTCGGCAAATCTGGAGAAATATGGTATCGATGTGTGTCATGTGGTGATTGGTCTCATAAAGACTGCAGTGGCGAAATAACTCCAAAAAACTATATTTctACCCTTCCTGACATTTACGAAAAAGACGTTATTCAGCAAGACACAGATATAAATGTAAATCATTTGGAAGCTGAAAATATGACAGACAGTGATGACGAGTATATTCCAGAAAACGAAGAAAGTAGAAGTGAAGATGAAGATAATGATGAGCCGTTAGCTAAGAAAAGAACACGTTGGAGGAAATCAGCATCAGACAAGtggaaaaaaaacattactAAAGAAAATAGAAAGTTGTGCAAGccgtatattaataaaaataaagcacATCCAGCCAAAGCACCACAACAAGTCGACTGTACCAACTGTAGATTTAAATGTACTTTGAACTTCAGTGAAGAGGACAGAAAGATTATTTGCGTGAATTACTGGAAGCTAGATTACTGCCGGCAAAAAGATGTAATTTTGTCATGCGTTAGTAACTTTGCACCAAAAGTGCATAGGGTCCGTACCGGCGCAGGTGTTAGAAAGGAGTCCAGCCGCAAGTACCATTTCAAGAAAGACAATGAATCTGTCCAAGTctgcaaaagtttttttttaaagactctATGTAGGGGAAAGTCGGGTAAGATGACGAAGCGGTTCGTGTACTGTGAAAATATAGTTAGGCAGTTTAAACATAACCTTCATGGAAtgccacaaaaatatattagaaagaCCAATCGGCGATCTTGGAGTCAGATAAATTTAACAGCAGCCTTATTAGCTATAGATCAAGGCCAATCTTGCAATAGCGCTGCTGCACGATACGATATTCCGGAAGCAACCTTACGCCGCTATATTAATAAAAGACGCGAGGGGAAGGATCTGCCAGAACATGGTGGAAGACACCGTGACACTTTTAGTGTAGCCCAAAGTGAATGTCTTGCTACATACATTAGAGACATCGATAGGAGAGCATTTGGACTTACAAAAACCCAACTTGGACGACTGGTATTTGAATATGCAGAACAAAATGACATACCTCATAGATTcaacaaaaacttaaaaatggcAGGAAAAGATTggataaaatcttttttaaataaatacaagatAAGTCTACGAACACCTGAGGCTACATCGGTAGGACGCCTTATTGGTTTTAACGAAGTCGCTGTTCAAAAGTTCTTCACAATTCTGAAAGAAGTCcgtgaaaaatacaattttgatgCAAGCCAAATATATAATGCGGATGAAAGCGGGCTCTCATCTGTGCCAACAAAGTTGCCAAAAATTTTATCTCCTACTGGGTCTCGACGCGTTGCAAGAATCGTTAGCGCAGAGCGTGGGAAAAATACCACCATTGTCTGTGCCGTCAATGCACTGGGTAACTATGTTCcccccttttttatttttaagcggATGCGTATGAAGGATGAACTACTTTTTGGAGCACCTCCAGGGTCAACAGGAAGAGCTCAACAGAATGGCTGGATGTCCACCgagatatttttacaatatttaaaacatttccaAAAATATACTAACTCTACGCCTGAAAGACCCAGTCTTTTGCTTGTCGATAACCATTCTTCGCACATTTCCTTAGACGGAATAAATTTTTGCAGGGAAAACGGGATTGTTATGGTAGGATTTCCACCCCACACCACTCACAGGTTGCAGCCTTTAGATGTGTCATTTTTTGGACCTCTTAAGACATTTTTTTCACAAGAATGCGATTCATTTGTTGTCAATAAACCTAATGAAGCCGTGactgataaaaatatttgcCAGATTTTTAATAAAGCATATCTAAAGGCTGCCACGGTTGGAAATGCTGTGCAAGGATTCAGGCGATGCGGAATTGAACCATTTGATTCTCATATTTTTGGCGAAGAAGATTTTGCTGCAACTAAAATGTCAGAGAGAGAGATTTCTTCTCAAGAAACTGTTCCTGAAGCACAATATGACACAGTAACTTCGCAAGCAGGGATAAATTCTTCAGAGTATTCATCGGAAGATGAGCTGCCCTTAATTCACTTTGTACAGAAAAATTCTTCTTTTTATCTGTTCCAGGAGAAAAATTACACACTGAGAATAATATTCAAGCAAATCATAACTTTATCCAACTAG
- Protein Sequence
- MGKYKRTTERGSYTKAALIAALDAVNNGMGKREAGRQFNVPEATLRRHLEIRNEHRQLNSKSLGRAPVFTIVQEEELARHTLKLGKLFFGLTRVELRCIAYDYAEANKIKHNFNIEKKMAGKDWYASFIRRNPTISLRKPEATSINRITAFSREEVNRIFDNLENVLSKYHFASDRIYNVDESGISTVPKENSKRLGPKGIKQFGIIASWERGKNVTVICAMSASGNYIPPLFVFPRARMSPLLEKNGPREAVYTCTKNGWSNEQVFFQWLNHFQSKVKSDGNNPVLLILDNHSSHVSLQIYKFCKQHFIVMLSLPPHTSHRLQPLDLSFFGPLKNAYSRQCNIFLKTKLNSGDSDGKLSHYDIAEIFNLAYCDTANKEKAISGFRSAGIYPLHPGKFSEDDFAPAENLLSQEHNDMKNINRINEHLTATTDEICEPHSPQPSCSGLQQTVNNSFSDHVSVEVVSPVPAPQKRRVNQKSSRAKQHSEILTATPLKIILEEKELKKSKKIQKVNVQAKRKVKKQVFIESDSESEGSLNGKDLCDDDELDDLDDDDDDVKNYCNICAELGKSGEIWYRCVSCGDWSHKDCSGEITPKNYISTLPDIYEKDVIQQDTDINVNHLEAENMTDSDDEYIPENEESRSEDEDNDEPLAKKRTRWRKSASDKWKKNITKENRKLCKPYINKNKAHPAKAPQQVDCTNCRFKCTLNFSEEDRKIICVNYWKLDYCRQKDVILSCVSNFAPKVHRVRTGAGVRKESSRKYHFKKDNESVQVCKSFFLKTLCRGKSGKMTKRFVYCENIVRQFKHNLHGMPQKYIRKTNRRSWSQINLTAALLAIDQGQSCNSAAARYDIPEATLRRYINKRREGKDLPEHGGRHRDTFSVAQSECLATYIRDIDRRAFGLTKTQLGRLVFEYAEQNDIPHRFNKNLKMAGKDWIKSFLNKYKISLRTPEATSVGRLIGFNEVAVQKFFTILKEVREKYNFDASQIYNADESGLSSVPTKLPKILSPTGSRRVARIVSAERGKNTTIVCAVNALGNYVPPFFIFKRMRMKDELLFGAPPGSTGRAQQNGWMSTEIFLQYLKHFQKYTNSTPERPSLLLVDNHSSHISLDGINFCRENGIVMVGFPPHTTHRLQPLDVSFFGPLKTFFSQECDSFVVNKPNEAVTDKNICQIFNKAYLKAATVGNAVQGFRRCGIEPFDSHIFGEEDFAATKMSEREISSQETVPEAQYDTVTSQAGINSSEYSSEDELPLIHFVQKNSSFYLFQEKNYTLRIIFKQIITLSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -