Bpel039007.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- lolal
- Assembly
- GCA_963991005.1
- Location
- OZ022564.1:46780867-46798154[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-15 2.4e-13 50.9 0.0 2 42 378 419 377 422 0.95
Sequence Information
- Coding Sequence
- ATGTTTGACACAACACTGTCATTTGCGGAGCATATAGAGAATATCTGTAACTCTGCCATAAGGATGCTAGGCTTTATATTTCGTGTCTGCAAACATTTCACCAATGTGGAAGCCATTAGAACTCTATATTTTGCTTATTCTCTATTCACCATAAACCCCTGCCAACATCCGATTGTGATCCTGAAAGATGTCAAATTCatggatttaaaaataatggtgGACTTTATGTACTACGGTGAAGTGAATGTGTCACAAGAACAACTACCGTACATCTTAAAGACAGctgaaatgttaaaaattaaagGCCTAGCAGAGATCCCCGTGGAGCAAACCCTAAGCAAAACGCACAACGCTACCGTAGAAAAGTCAGAGCTGCTGACGTCCCAAGAAACGAATTGGGCCAATGACGGGTTGGCCCAAATGCAATGTTCGACGCCTTCGCCATGTCCGTTGAGTCCGATAAGTAAACGAAAACGCCTAAGAAAGACATCGTCCGGGTCGGGTTCCGGTGAAAGACCGGAAAATTTGGAAATGCCGCCGGGAAACGACTTGCTGTTGACGAGTCAAAATGTCGGCAACATTTTGGGGTCCGTTATAAAATCAGACCCTGGGGGATACTCATCAGATAGCAGTAATCTCGGACAAAAAAGTAAGCAGCACAGCGGAGAATCGATAGACCTACAGAGAGGCAGTTCGCACGAGAGCGTCGATGGGGATCCCttgcatcaaataacattgCAGGTTCCTCAACATCAACAACAGCAACAAGAAGCCAATATGCAACATAACTTGGAGTCACAGTCTCAGTCGGAGGTTCCGGGTACTTCCAGTACATCCcagcaacaacaacaacaacaacaacaatcgAGCATAGGTCTACAGTGGAACGTCATAGATCAAAATTACTATAGTTCCTGTGCCCCGGAACCTATTGGTGGCGGTTCCTCTCACGGTACCGGTTCCGTTCACCATAGTCACGGTACTATTGTCCACGGCCACGGGTCCGTGGCCGGGGGACAATTGGCCGCGACCCCCCAGAGCCCCGCCGAGGCGGGATGCTTCCAGGGACAGATAGGGAATTCTCCTCCTCAAATGATACCTAAGAGGAAGAGAAGCGTGAACCCCCAGGCGGACGAGAATTTTATCAAGGCCTTGGAGGCGGTGAGGTTCGGGGGTATAGGCTTCTGTAAGGCCGCCAGGCTGTACGGGGTGAACAACAGGACCTTATGGCTGGAGTATAAGAAGAGGGGGTACCCCAACTACAGGTTGAGCATCAAGAACCGTAAGCAGGATACTCCGGGTCAGGCCGAGAGCTCCGACCAAGCCCCCGTTAGCCAGAACGAGCTAGTTTTTCCGAAACAAGAGGAAATATACACGACCACGAAGTCCGGCGATCAGAACGATCAAATTCTATGCGCGACGTCGAGTCATCCGGTGGCCTTGATAAGCGGCACGTTCTTCGAAGGAAAGCACCTGGACCTAGGTCAGGTGATCCATCGGCCCAAGTACTTGGACCCGTCGCTCATCAATTCGGCTCAAGGGATCAATTTTCAGAGCATCAATTTCGAACAAATGTGA
- Protein Sequence
- MFDTTLSFAEHIENICNSAIRMLGFIFRVCKHFTNVEAIRTLYFAYSLFTINPCQHPIVILKDVKFMDLKIMVDFMYYGEVNVSQEQLPYILKTAEMLKIKGLAEIPVEQTLSKTHNATVEKSELLTSQETNWANDGLAQMQCSTPSPCPLSPISKRKRLRKTSSGSGSGERPENLEMPPGNDLLLTSQNVGNILGSVIKSDPGGYSSDSSNLGQKSKQHSGESIDLQRGSSHESVDGDPLHQITLQVPQHQQQQQEANMQHNLESQSQSEVPGTSSTSQQQQQQQQQSSIGLQWNVIDQNYYSSCAPEPIGGGSSHGTGSVHHSHGTIVHGHGSVAGGQLAATPQSPAEAGCFQGQIGNSPPQMIPKRKRSVNPQADENFIKALEAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPNYRLSIKNRKQDTPGQAESSDQAPVSQNELVFPKQEEIYTTTKSGDQNDQILCATSSHPVALISGTFFEGKHLDLGQVIHRPKYLDPSLINSAQGINFQSINFEQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01238477;
- 90% Identity
- iTF_01240958;
- 80% Identity
- iTF_00196473;