Bbre014693.1
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- nfxl1
- Assembly
- GCA_031353405.1
- Location
- JASFAT010003729.1:17392-19866[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.052 5.2e+02 1.0 0.2 4 10 169 175 168 176 0.96 3 19 3.1e-07 0.0031 17.6 15.9 3 19 186 202 185 202 0.95 4 19 5.9e-09 5.9e-05 23.2 13.2 1 19 237 255 237 255 0.93 5 19 2 2e+04 -4.1 2.5 6 10 280 284 279 284 0.88 6 19 1.3e-08 0.00013 22.0 12.0 1 19 290 308 290 308 0.98 7 19 6.6e-06 0.066 13.4 19.8 3 19 345 361 337 361 0.86 8 19 1 1e+04 -3.1 1.8 5 10 384 389 384 389 0.93 9 19 2.6e-06 0.026 14.7 19.4 1 18 395 412 395 413 0.97 10 19 6.5e-09 6.5e-05 23.0 16.8 1 19 422 440 422 440 0.98 11 19 7.3e-05 0.73 10.1 6.1 9 19 488 498 486 498 0.90 12 19 0.062 6.2e+02 0.7 8.4 3 12 509 518 508 518 0.90 13 19 0.4 4e+03 -1.9 2.7 15 18 548 551 547 552 0.86 14 19 0.2 2e+03 -0.9 0.1 8 12 568 572 567 573 0.82 15 19 0.00071 7.1 6.9 5.6 1 11 588 598 582 599 0.91 16 19 0.87 8.7e+03 -3.0 1.3 15 18 613 616 612 617 0.85 17 19 1.8e-05 0.18 12.0 12.6 3 18 629 645 628 646 0.88 18 19 2 2e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 7.8e-06 0.078 13.2 9.7 1 16 687 701 687 706 0.90
Sequence Information
- Coding Sequence
- ATGTCACGCAAGTATCGGGATGCGGCTGCAAAATTGCAGCAAAATGtccaaaaacatttaaatgaaatgaaagaacTTTCTTCCTCTGAAGATGAAGAACCGTTTGAGGAAACTGTACTTGATGGAATACTACAGAGTTATTCGAGGGGCGGAGGTGACACCCAGATGCTCAATAGAACTAAACATCTTCTAGAAGAAGTGATAAGCGGAAGAAATGTGACTTGCATTATCTGTATAGGGTCTATTAAACGTGTTAATGCTATTTGGAATTGTGAGCACTGTTACTCCTACTTTCACCTTTCATGTGTACAGAAATGGGCTAATGACTGTGTGAGTGTCAGAACTGAAGAGCACCATGGACCTATAGCAGTTTTCGTACCCCGAAAAGTTGAATGGTGTTGTCCAAAATGTCGGCAATCTTACAGCAAAGATGAAATACCGCGAAAATATCGCTGCTATTGTGGTAAGGTTGATGATCCACCATTGCACCCTTGGTTAATACCTCACTCCTGTGGGGAGGTTTGTGGAAAACGACTCTCAATAGGAGATAACTGTAAACACAAATGCCTTCTTCTTTGCCATCCAGGGCCCTGTCCCCCTTGTCCACAAACTGTAAATGGAGCTTGCTTTTGTCAAAAGCAACGTAAAAGAGTAAGATGCAGTGCTGCAAAATGGTCATGTGAACAACAgtgtaataaaattcttccttGTAATTCACACAAGTGTGAGAGTATTTGTCATGAAGGTAATTGCCCTCCATGCAGCTACACAAGCTTACAATCCTGCCAGTGCGGTGCTGAAAAAGCAAAACGCCCTTGCAATGATTTAATTTGGCAGTGTCAGAAAAAATGTAACAAGCCATTTGCATGTGGCTATCACAAATGTGAAAATATTTGTCATCCAGGCAGCTGTGAACTTTGTCCCAATTCTGGTTGGATGTCATGTCCATGTGGAGCAAACCGGAGCTATGTCCAGTGTCCAGATGTTATGGAAACTTGTTTGGGTACTTGCGGTAAAAAACATGAGGATTGTGAACACAGTTGTCCAGAGAAATGTCATAGAGGGCCATGTCCACCTTGCCAAGTAATGATACAGAAAAAATGTCAGTGTTCCTCACATGTACGATCACTGCCATGTAGCAAGGAATTCAAATGTGAATCCAAGTGTAGGGGAATACGCCCCTGTGGCAAACATACATGTGGACGTAAATGTTGCAATGGAAAATGTCCACCTTGTGAAAAAATCTGCGATAAACCTTTACAATGTGGTCGTCACAAATGTCCTTCAGTTTGCCACCATGGCCCATGCTATCCATGTTCGAGGGAGTCAAAAATCATGTGCAGATGCAAGGAAACTTTCATCACAGTGCCCTGCGGCAGAGAGAGGAATATGAAACCTCCAAAATGTAATTTgccttgtaaaattaaatacaaatgtgGACATATAGATGAGAACAAACATACTTGCCACTTTGGTGACTGCCCACCTTGTAAAGCTATTTGCTTAAAGTCTTATGAAAAATGTGAACATCAGTGTAAAGCGACTTGCCATGAGTATGTGTTAGTTGTATTCAAACAGGTGGAAAAGCCAGCAACTCCATGGGAAATACAGCCCCCTAAATCTAAAATCATGACACTACATTGCCCACCTTGTGAAATACCTATCCCAGTTGCATGCTTTGGTGAACATGAAACTGATAACCAACCGTGTCATTCAGCAACACGGCGGCCGTGTGGGAGAGAATGTGGACGCCAACTTGATTGCACAAATCACACTTGTGCTCTACTCtgccatttatataaatatgatcctGAATATTCAAATGTGCCTTATACATGCAAACCGTGTGATAAAGAATGTATGAAAGTCCGTCCGGATAAGTGTATTCACAAATGTGCAATACGCAGCTGTCACCCGGGTCCTTGCCAACCCTGTGACATTCTAGAAAGGATTCCATGTCATTGTGGTGTCACTGAGATATATTTACGGTGCAGAGAATTATCTACAGCTACAGAAGATATGTTAAGTTGTAAGCAACAATGTCCAAGGTTATTGGCATGTTCTCATCggtgtaaaaatatttgccaCCCCGGCCAATGTGCAGATAACCAGATATGCATGAAAAAGACTAAAGTTTATTGCCCTTGCGGTAATTTGAAGAAAGAAGCACCCTGTAATGCTGTGAGAATGAAAGAGGTTATAATTACATGTGATGGCAGTTGTGAAGCAAAAAAAGAAGCTGCAaggatagaaaaagaaaaagaggaACAAAGATTGAAGGTGTTGGAAGAAGAAAGGAATCGTAAAGAATTAGCGGAATATGAATGGAAGTTAAGCggcaaaaagaaaaagtataaagaaaagaaagtgaTGATAAGTAAAGATGAAAGAAATTTACTCCAAAAGTACTGGATTCCTATTTTgtctttaataattgtaatgttaGCCTTTTTgtactacattttttatgtgTAA
- Protein Sequence
- MSRKYRDAAAKLQQNVQKHLNEMKELSSSEDEEPFEETVLDGILQSYSRGGGDTQMLNRTKHLLEEVISGRNVTCIICIGSIKRVNAIWNCEHCYSYFHLSCVQKWANDCVSVRTEEHHGPIAVFVPRKVEWCCPKCRQSYSKDEIPRKYRCYCGKVDDPPLHPWLIPHSCGEVCGKRLSIGDNCKHKCLLLCHPGPCPPCPQTVNGACFCQKQRKRVRCSAAKWSCEQQCNKILPCNSHKCESICHEGNCPPCSYTSLQSCQCGAEKAKRPCNDLIWQCQKKCNKPFACGYHKCENICHPGSCELCPNSGWMSCPCGANRSYVQCPDVMETCLGTCGKKHEDCEHSCPEKCHRGPCPPCQVMIQKKCQCSSHVRSLPCSKEFKCESKCRGIRPCGKHTCGRKCCNGKCPPCEKICDKPLQCGRHKCPSVCHHGPCYPCSRESKIMCRCKETFITVPCGRERNMKPPKCNLPCKIKYKCGHIDENKHTCHFGDCPPCKAICLKSYEKCEHQCKATCHEYVLVVFKQVEKPATPWEIQPPKSKIMTLHCPPCEIPIPVACFGEHETDNQPCHSATRRPCGRECGRQLDCTNHTCALLCHLYKYDPEYSNVPYTCKPCDKECMKVRPDKCIHKCAIRSCHPGPCQPCDILERIPCHCGVTEIYLRCRELSTATEDMLSCKQQCPRLLACSHRCKNICHPGQCADNQICMKKTKVYCPCGNLKKEAPCNAVRMKEVIITCDGSCEAKKEAARIEKEKEEQRLKVLEEERNRKELAEYEWKLSGKKKKYKEKKVMISKDERNLLQKYWIPILSLIIVMLAFLYYIFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -