Bbre004437.1
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- ZFY
- Assembly
- GCA_031353405.1
- Location
- JASFAT010000939.1:172008-177203[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.4e-05 0.0022 18.5 0.4 2 21 170 189 169 190 0.94 2 19 2.2 1.4e+02 3.4 0.2 1 23 223 246 223 246 0.90 3 19 2.5e-05 0.0016 19.0 0.2 2 23 252 273 251 273 0.97 4 19 0.019 1.2 9.9 1.3 2 21 277 296 276 297 0.92 5 19 0.0014 0.09 13.4 0.6 2 23 340 362 339 362 0.95 6 19 2.9 1.9e+02 3.0 0.4 3 23 370 389 369 389 0.84 7 19 0.018 1.1 10.0 1.7 1 23 395 417 395 417 0.98 8 19 0.044 2.8 8.7 0.4 1 23 423 446 423 446 0.95 9 19 0.41 26 5.7 0.5 1 23 455 478 455 478 0.93 10 19 0.19 12 6.7 0.8 1 16 487 502 487 504 0.88 11 19 1.5e-05 0.00095 19.7 3.4 2 22 612 632 611 632 0.93 12 19 3.8 2.4e+02 2.6 1.6 3 23 638 658 637 658 0.90 13 19 0.11 6.9 7.5 3.9 1 23 663 686 663 686 0.97 14 19 0.018 1.1 10.0 0.7 1 23 691 713 691 713 0.93 15 19 2.1 1.4e+02 3.4 4.8 1 20 716 735 716 737 0.93 16 19 0.00056 0.036 14.7 0.7 1 23 749 772 749 772 0.95 17 19 0.02 1.3 9.8 4.9 1 23 778 800 778 800 0.96 18 19 0.56 36 5.3 0.3 1 23 834 857 834 857 0.88 19 19 0.013 0.83 10.4 3.3 2 23 866 888 865 888 0.91
Sequence Information
- Coding Sequence
- ATGAACCGGCAAGTAGACATTAAAGCTTTAGTTTCACATGTAGTACGAGGAGATGGTCTAAATAAATGTAGAATTTGCATGGGAGACACATCGGAAGGTCAAGTGTTCCTTAGTGATACAGTACTGATGGAAGGTGAACACAAAATAACATTATCTGAATTATTGGAGATCATATCAGGAGTTGAGGTGCCGCGAAGTGAGGATCTACCAGTTGGCCTGTGCACCGCATGCTCAAACTCGGCCCTTAACGCAGCTCAATTCAGAATCTTATGTAGACAAGCCACCTTCAAATGGGACTCTATGATTAAACTTTTAGATAACATACCATTAGATGtccataaatttaaaactatgttCCTAATTATAGAAGAAAATCAAATGACAATTATAAATGATGGAGATGGCCTTATTACCCATTCGACCAACATAAACTTACCTGAACAAAAACCTAGCAATGAAGCCAATGCTAAACCTGAAATGCTAGAAGGTTTTAAAAAACACAAGTGTCAATGTCCCGATTGTGGTAAAAAGTTCATAAACGCACCTCAATTGTACCAACACCTAAAGGAATCAACAGATTTGAAGCGGGCTTGTTATATTTGTGCTCAAATTATGACCCGAGATGAATTAGTAACTCATCTAAGCAGCGTTCATAAATGTAAACCATATGCCTGCAAGAAATGCCCAGCATTACTGCGCTCTTTTGGTCAGTATGTACAACACCTGGGAAAAGCTCACACTGATAGTTCTTCCACATGTGGAGATTGTGGGCGTGGATTCAAAACATCATATGGATTTCGAGCACATCTCTCCATTCATACTTTGAAAGTATGTCCAGGATGTGATAAATTGTTTCGCAATCAAACATGTTATCTGTATCATGTAAAGAGATGCTGTAACTTGTACtccaacaaaaaagaaattcaaaatacCAAAACAAAGATGATAGAGGTCAAAAATAGACAAAGTAACAAAAAGGTTAGAGTTGGGATGCGCGGAAGTACCAACAAACAATGTATATGTGATTACTGCGGAAAGAAATTTGCAGGAAAGAAGTTTGTCTCCGCACACATTCAAATAGTCCATATGAAAAATACTCATAGACCTTGTAGTTACTGTGGAAAGCTTCTAGCAGCAGCTCATATGACAGAGCATGTAAAAAAGCACGAACTAATCAGAAGTTACAGATGTGAACACTGCAGCTTAGTCCTTAAGACTAAACTGGGATACGTTCAACACTTACGCCTTCATACGGGCGAGAAGCCATATGTCTGTCAGTATTGCGGTGATTCATTTTCAGCATCGTCCAGACGGTCACAGCATATACTCAAGATTCACAAAAGTTCTGAAATAATGTTCAAGCATGCATGTCTATACTGTCCAGCTAGATTTCGTCTTCCATATATCATGAAAAAACACATATCATCTGTCCATAGTATGAACTTGGAAGATCCTCAGTTTGAATGCAATGAATGTGAGGAGAAGTTCAGCAGTTGTCGTGGACTTGTCGAGGAGTCGCCGGACCTGCCCCACAGTCTATGCACCACTTGTACAAAGACGGGGATCGCAGCTCTGAACTTTAGAAAGATATGCCTGGAGTCTGCAAAGGAGTGGGACAGTGTTGTCTCATTTCTCTCCCAACTCACCGACCCCGTAGATGACGATAAGGCGTACTGTGTACTGTACAACGACACAGAATTGGCGCTAATCAAAGCAAAGgaatcaattaaaaatgtagCGCAGGCTGTGGAAAAGGTAAACAGCGGCTTCCAGTCATTGGGTCCAATGAAACCCAATAGAAAGCTAAAAAAGCGATACTACAAAAGTAGATGCAGATGCAAAGACTGTGGTAAGGAGTTCCCCACTCCACATCATTTGAATCAGCATTTGAAAATGACAAAGAAACGCGCGTGCACGCATTGCGGACTTATCGTATCAAGGGAGAAACTACACGGGCATTTGCAAAAAATACACAAGAGGAACCTTTATCACTGTGAGATATGCTTCAAATTGTTCCAAGAGCACCAAGAACTGAAGCAGCACACACTAACCGCACACAGCCTGACCTCCCACATCTGCAGCACTTGTAAAAATGGATTCTCCAACGAAAGGGCGTTAAGGGCTCACGTTTATGCTCACAGCCTCTTCAGTTGCACCTTCTGCAATAGCAGTTTTGAGAATCGCAGGTGTTACAAATACCACGTCAGTCGCTGCAAAGGTGTCAAGAGACCTCCAGTTTCGGTTTACGAGTGCGACGACTGCGGGAGCAAATATAACAAGAAGCAGTCCCTACGGATACACATAGAGCAAAAGCACATCAACGTCCTACCTTACGTTTGCCAGTATTGCGGCAAAAGGAGCTCTACCCACAGTCATCATAAGGCTCATGTCGCTGTGCATATGTCAGAGAGGAAGATCTACCAGTGCTACTGTGGTGCGAAGATGCTTACGTTGTTGGGTTTCAATCTTCACCAGAGAATCCACACCGGCGAAAAGCCGTACGAATGTCCAGAGTGCGGTGATAGATTCCTGTCTGCGTCTAGACGCTTGGATCACATAAAACGCCGACACGCCAGTTCCAAAGATATGCCACACGCGTGTGATTGTTGCCAAGCCAAATTTATCAGACCATCGCAATTGAAGAAACATTATCAATCTGTCCATAGCACGTCGAGGTGA
- Protein Sequence
- MNRQVDIKALVSHVVRGDGLNKCRICMGDTSEGQVFLSDTVLMEGEHKITLSELLEIISGVEVPRSEDLPVGLCTACSNSALNAAQFRILCRQATFKWDSMIKLLDNIPLDVHKFKTMFLIIEENQMTIINDGDGLITHSTNINLPEQKPSNEANAKPEMLEGFKKHKCQCPDCGKKFINAPQLYQHLKESTDLKRACYICAQIMTRDELVTHLSSVHKCKPYACKKCPALLRSFGQYVQHLGKAHTDSSSTCGDCGRGFKTSYGFRAHLSIHTLKVCPGCDKLFRNQTCYLYHVKRCCNLYSNKKEIQNTKTKMIEVKNRQSNKKVRVGMRGSTNKQCICDYCGKKFAGKKFVSAHIQIVHMKNTHRPCSYCGKLLAAAHMTEHVKKHELIRSYRCEHCSLVLKTKLGYVQHLRLHTGEKPYVCQYCGDSFSASSRRSQHILKIHKSSEIMFKHACLYCPARFRLPYIMKKHISSVHSMNLEDPQFECNECEEKFSSCRGLVEESPDLPHSLCTTCTKTGIAALNFRKICLESAKEWDSVVSFLSQLTDPVDDDKAYCVLYNDTELALIKAKESIKNVAQAVEKVNSGFQSLGPMKPNRKLKKRYYKSRCRCKDCGKEFPTPHHLNQHLKMTKKRACTHCGLIVSREKLHGHLQKIHKRNLYHCEICFKLFQEHQELKQHTLTAHSLTSHICSTCKNGFSNERALRAHVYAHSLFSCTFCNSSFENRRCYKYHVSRCKGVKRPPVSVYECDDCGSKYNKKQSLRIHIEQKHINVLPYVCQYCGKRSSTHSHHKAHVAVHMSERKIYQCYCGAKMLTLLGFNLHQRIHTGEKPYECPECGDRFLSASRRLDHIKRRHASSKDMPHACDCCQAKFIRPSQLKKHYQSVHSTSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -