Bbre007015.1
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- HIVEP1
- Assembly
- GCA_031353405.1
- Location
- JASFAT010001654.1:220195-228706[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00015 0.0094 16.5 0.6 1 23 143 165 143 165 0.98 2 8 0.0021 0.14 12.9 0.8 6 23 176 195 171 195 0.90 3 8 0.0042 0.27 11.9 0.0 1 20 423 442 423 444 0.94 4 8 2.4e-06 0.00016 22.1 2.0 1 23 1206 1228 1206 1228 0.99 5 8 2.1e-05 0.0013 19.2 3.9 1 23 1234 1258 1234 1258 0.92 6 8 9.6e-06 0.00061 20.3 0.9 2 23 1658 1679 1658 1679 0.97 7 8 0.00026 0.017 15.7 1.5 1 23 1685 1709 1685 1709 0.92 8 8 0.0012 0.076 13.7 2.6 1 23 1730 1754 1730 1754 0.93
Sequence Information
- Coding Sequence
- ATGCCGCTAACACAGGAAAAACGTTTGGATAGCAATTTCACTAGTAACAATGATCAAAGCTATTtacataagaaatttaaaaaaatggcatCTACCATATCTGTTTTCCCTCCAAATCTCCCTAAATGTGAGGAAAACAAACAAAGAGAATCAAACGTTGCATCTTGTAATACTTTAATTTCAAATGGAAGCATCGCAGCTGCCCATCCAgaaatagagaaaataaaagataaagaagaaaaaaaacatattgacgtggaaaaaaatgtacaaattaattttaatgaccaGAAAAGTAGATTAagtgatttaaataatattgttcagATATCTGGTAAAACCAGTTACACTGAAGAATTTTCAAATAAGACTGAAAACATTGAAAACGATATAATCAGGGATTCTTACAGCGGAGGAACTGGACGTTATATATGCCCATATTGTAAACTATCTTGTGCCAAGCCATCAGTCCTTCAAAAACATATCAGAGCTCATACAAATGAGAGACCTTATCCTTGTATACCATGCGGATttgcttttaaaacaaaatcaaatttatataagcATCGAAGATCAAGAACACATGCTTTAAGATTACAGGGTACAGACGTACCCGTTTCAATAAATGACGAAGACTTGTCGGGTGGATCTGAAAGTGACGCTTCAACACCACCAACTTCTCTGTCTGATAATGGATCAGAAGCTTCCCTTATTCGTGTTGAAAATAACAGATTACATGACATATCTTCGCCGGAATTAACAAATGATAGtaatataacaattacaatgaatgttTCTacaagtgataataataaatcaaaaacaatttataaacccAAGTTCAGAGCAGCATTTTATCAGGGAGTTGATGAAaaagataagataaaaaaaacgatttctTCAAACGCTGACTTTCTTACAGAACATATCtctaaaattatatctgataacGAGGCGATTGTTGACGTTATAGAAACGCctttacaaaagaaatatggTAAAATTAAGCAAATCGCTGAAAGCAAACAATTTATGAATGATTCTGAATTAAAACAAGAGGCATCTcctttaaatttaactaaaactaCTAACGAAACTGATAAATCCTTTAGGAAAAGATCACATTCCGAAAGTTTCTCCCAATTTGACGATCTAAAACACCCATTGAATCCTGAAGGATCAATAATCAAAGATCTTTTGCTTAAAAGTAAAGCTAATGGCCTTACCACAATCACAGGCGAATTGTTAGACGGATTAGAACCTCTATTTGTTTGCCCTTtatgtcaaattatttataaaagcgcTGAAAATTTAGAAGTTCATCGATTGTATTATTGTAAAGGAAGTATGGCAATTAATTCTTCGGGAATAACCAATCCACAAAAAGATGTGAAAATTATAAGATCGGATATTTTTATACGAAGCAATTCAGTTAACGCTCGTTTACCAGAAACACCCATACATAGTATTCCCAAATTCAGTTTGACAGCTCAAtcaccttcaaaaagcaaaccTGATAACCTTGTTCTTCTGAGATCAGAATCTAACGAAGTAATTGCTCCTTTACCATCACCTGGTCCTTTACTTGGAAACACAAGGCTTGTAGACACTAGAACATCTTCTGATTTTACCggaaaaacagaaaatataaaagtgaGGTTAAAAGAAGCTAGTCCGAAAAGAAGACTTGATAACAGGTCTGATACATATAGTCCCAGGCTTTTGGAAAACATTTCTCCGCGATCAACAGATTCATATCCGCCTTCTAAGATCAGATGTATAGAATCAAATGCTGGTAATATAAGGACAATAGAAGAACTATCCCCACATATAAGGCACAATTCTACTTCTCTTCAAATGTTTGGAGGAGAGGTGAAAATAGTCGATCACTTAGGCAGCACTACAACATTACGCATTGAGCCAAGTAAAAACCAACTTTCACCTATTTTAATACAACAAAGCATGTCTCCATCAAAATTTGGCAGCGATTCAGAAGCTAGTAGTGTAGTAGTACGATCGGGTCTTCATTCTGGGGGAACGATTGTGCATAATCCTCCAACGCCTAAAGAAATTATAGGTACATCCCAACCACAAACGCCAAGAATTACAATATCAACGTCTAGTCTACAAAATCCAAGTATACTTAATGTCCATGACATATCACACTTTCCGTTTCCACCATTAAGTGCCATTACTGCATACAATCCATTAACATTACCTCCTCTTAGTCCATCTTCTTCACCAAATGGGGCTACGACTATATTACATGGCGGAAAGCTAATTCCTCACGTACCAGGAATACCAGGACCTAACACAGCTGCTACTTTCGTAACAAGCACAACCATGCAACAAAAGCCTGCAAATAACGATATGCATAATTTTTCACAGACCCGGCCAGAGGGtgttaaagataaattaaatactattaacGCACATGGAAGAGAAACGATTGTATCTAACTATGAAAAACTTCTTAATTCTCGAAATCCTAATTCCAAATCAATTACGGTGGAACCTGTATGTAGTCAAAGtcaagattttttaaaagttgaagTACCCCATTATGTTTCGAACATTCccattataaaagttaaaaatgtagAAGAATCAAATACGTCTTTGGGTTCTAATATATCTACATCAAACATTGTTAAATTTGTTGGAAGACTCGATAGCACACTTAAAAGAAGTTCTGATGGTATTCCCAAAATAGCATCAGAAATACCTAAATACGTTTTGAAAGAAAATAGTAATACTTCCATAGGAAAAACTAGAATTAAAGATTTCAATTTACATGTTCCAATAAAACGTATTGAAGTTAAATCTGAAAATGAATTAAGAAATTTCAATTACGAAAATGTTATTACTAAAGCagaaatatacaataatcaGATTCAAAGTTCCTCTGAAGTTCAAAAAAATACGAATGCACAAGAAACTTCTCTAAGTACTGTTCAAAACGAAAGATCAGAAACCTCGTACTTTCAAAAAAATTCATCAGCAAAATCAGCTTCCGAAGAAAGGAAAACAAAATTTCTGAGACCATCTACTTTACCGTTAAAACCGGGAACGTTTACACCCAAAAGACACCATGGAATTACGCCCAATGCTAACACAATGCCTTTAATATCTCCTGAAACGCCGCGACCAGCGAAGGCGTATGGACAGTTGTATTTAAATGGAAACGCCTATACTTATTTAGGCTTAAAATGCTCaactaaagtattttattgtaccATTAATCGGCCCCAACCGATGTATGTGCCGAATCAACACTTTTTATCCATGTATAGTAATTGGCAGTTATTATCTGAATTGACGCCGGACCCGCTCGGATTGACAGCTTCGTCTGCTATGTCCCTATATGATTCACGTCATCGACCACAAAATGTAGCCGTCAGTGTGATTAAACAGGATCTTATATTGACTCATTCGTCACAgtggaataaaaatttgaagAATATTCAACAGATTCTAACAACTGTTGATACTAAAAGAACAGAAGAATCAAAACAACAACATATTGATAGTATCATGATGCCCAAAAAAGAATTAGCTGGAGGTTTTGAAAGTAATGAAGAATACACCTATGTCCGAGGTCGGGGCAGAGGACGATATGTTTGTTCGGAATGTGGAATCCGTTGTAAAAAACCATCGATGCTAAAAAAACATATTCGTACGCACACTGATGTCCGACCTTACACCTGTACACATTGCGCATTCAGtttTAAAACCAAAGGAAACTTAACTAAACATATGAAAAGTAAAGCGCATTATAAAAAGTGTTGTGAATTGGGCATTAATCCTAATGAAGGTAATGAGGAATGTGTAGAGATGACAACATGTTCGGGTGAAACAGATGACGACACTGAATCCGATGGTGATGAAGGAAATGAAGGCGAAACAGAGTCTAGtgATACAGAGATATACAAATCGCGACTGCCAGAACATGAAGCTGCTCATTGCTTACTTTCTTTGGGAGGGTGCCACACAGCAACATCTACAACTCCTGGTTTAATAACTAGCGCTCGACCTTCGACTTACCCTTACACTCCCCTTATAGATACTGTCACCTTAAATCCAAGTCCTGACAAAGTACAATtggtcaaaaataatttattagattcTTCAGTTAATATGGAAAATGAACCAATGGATTTAAGCAGAAGCGATGTGAAATGTCCCAATATGCCTGAAATACCAACTGCTAAGGAATCTAGTGTCCTTGCATCTTTAGCATCTAATACAGCAAAACTTCCTCAATATCATAGTCAGTGGTCAAATGGAGAACCAATGTTACACACCTATTTAACAGAGCGAGCTCTTTtggatacaaaaataaaacaaagtcaaCTCACATCTAATCTcagtaaaagaaaaattgaattAGAAAAGCCTATGTTCGTAGAGTCACATGGCAATTTGGATAGCAAAAGTGCACTCACAACAACAGCTCTTAATGTTACAACGCCGATTACATTATCTCAAGGAAACACATCTAAAGTTTCTAACGTTAGTGGAAATGACATCAATGTTAAGTCAATATCTATACCTAAAGAAGACCACAAAGCTGGTGTTGGTGATACTCTTAACTCTGTTAGTTTTTGTGTAGAACCTAAAAGAGCTCTAACTCCAAATATCAGCCCTGAAAATGCTAAACATGTTGTAtctgaatatttaaaacaagcTAGAATTAATCTTATCAAAACATTAGATGACCCCTTCCAAAATCAACCTGATAACTCAAGTGATGAAAGCAACAGtagcaaaattaatattgaagaaAAGACTAAAATAGATGAGCACAATTTTTCAGAATCAGAACTTATAAAAATGCCATTAGATCATGACACTGTTGCTCGAAAAGTAGTTATAGGGGTTGGTGGAGTAGCATTTAAAATAAGCAAAGGCAAAGAGTTTGAAGGGTCTGCTCCTTATTCACCAGGCAGACTAATGGAAGATGGACGTAGAGTATGTGATTTCTGTAACAAAACTTTTACCAAGCCCTCACAATTAAGGTTGCATTTGAATATACATTACATGGAAAGGCCCTTTCGTTGTAGTGTGTGTGCTGTGAGTTTTAGAACAAGAGGTCACCTCCAAAAGCATGAGAGGTCAGGTTCTCATCACAATAAAGTTTCTATGACCTCTACATTTGGAGCTGCAACATCAGTAAACCCTCGTCCTTTTCGTTGTTCAGATTGTAATATAGCCTTTAGAATACATGGACATCTAGCAAAACATTTAAGAAGCAAAATGCATGTCATGAGGCTAGAGTGCTTATTTAAATTACCATTTGGAACATTTACTGAAATCGAGCGAGCGGGAGTTAGTTTAACGGACATTGATACAACTGATTGCGCGAGTTCATTAGCTAGCCTACAGTCACTCGCTAGGAAACTGCACGAGAATGATCCTACGAAGTTGGAGTATCGAGAAGCTCACAATGCAGTGACATCATCTGCAGGCAGAGAATCATCTGAGGATGAAGATGTCACTGTGCCATTGGAAAAAACTTGTGACAATGAAAATGATAGTGATATGAAAActaatgaaaataatgaaagtCAGGACATTGAATCAAGAATTAAATATAGTGCCACAGATAATTAG
- Protein Sequence
- MPLTQEKRLDSNFTSNNDQSYLHKKFKKMASTISVFPPNLPKCEENKQRESNVASCNTLISNGSIAAAHPEIEKIKDKEEKKHIDVEKNVQINFNDQKSRLSDLNNIVQISGKTSYTEEFSNKTENIENDIIRDSYSGGTGRYICPYCKLSCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTKSNLYKHRRSRTHALRLQGTDVPVSINDEDLSGGSESDASTPPTSLSDNGSEASLIRVENNRLHDISSPELTNDSNITITMNVSTSDNNKSKTIYKPKFRAAFYQGVDEKDKIKKTISSNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQFMNDSELKQEASPLNLTKTTNETDKSFRKRSHSESFSQFDDLKHPLNPEGSIIKDLLLKSKANGLTTITGELLDGLEPLFVCPLCQIIYKSAENLEVHRLYYCKGSMAINSSGITNPQKDVKIIRSDIFIRSNSVNARLPETPIHSIPKFSLTAQSPSKSKPDNLVLLRSESNEVIAPLPSPGPLLGNTRLVDTRTSSDFTGKTENIKVRLKEASPKRRLDNRSDTYSPRLLENISPRSTDSYPPSKIRCIESNAGNIRTIEELSPHIRHNSTSLQMFGGEVKIVDHLGSTTTLRIEPSKNQLSPILIQQSMSPSKFGSDSEASSVVVRSGLHSGGTIVHNPPTPKEIIGTSQPQTPRITISTSSLQNPSILNVHDISHFPFPPLSAITAYNPLTLPPLSPSSSPNGATTILHGGKLIPHVPGIPGPNTAATFVTSTTMQQKPANNDMHNFSQTRPEGVKDKLNTINAHGRETIVSNYEKLLNSRNPNSKSITVEPVCSQSQDFLKVEVPHYVSNIPIIKVKNVEESNTSLGSNISTSNIVKFVGRLDSTLKRSSDGIPKIASEIPKYVLKENSNTSIGKTRIKDFNLHVPIKRIEVKSENELRNFNYENVITKAEIYNNQIQSSSEVQKNTNAQETSLSTVQNERSETSYFQKNSSAKSASEERKTKFLRPSTLPLKPGTFTPKRHHGITPNANTMPLISPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPMYVPNQHFLSMYSNWQLLSELTPDPLGLTASSAMSLYDSRHRPQNVAVSVIKQDLILTHSSQWNKNLKNIQQILTTVDTKRTEESKQQHIDSIMMPKKELAGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCTHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNEECVEMTTCSGETDDDTESDGDEGNEGETESSDTEIYKSRLPEHEAAHCLLSLGGCHTATSTTPGLITSARPSTYPYTPLIDTVTLNPSPDKVQLVKNNLLDSSVNMENEPMDLSRSDVKCPNMPEIPTAKESSVLASLASNTAKLPQYHSQWSNGEPMLHTYLTERALLDTKIKQSQLTSNLSKRKIELEKPMFVESHGNLDSKSALTTTALNVTTPITLSQGNTSKVSNVSGNDINVKSISIPKEDHKAGVGDTLNSVSFCVEPKRALTPNISPENAKHVVSEYLKQARINLIKTLDDPFQNQPDNSSDESNSSKINIEEKTKIDEHNFSESELIKMPLDHDTVARKVVIGVGGVAFKISKGKEFEGSAPYSPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSVNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHENDPTKLEYREAHNAVTSSAGRESSEDEDVTVPLEKTCDNENDSDMKTNENNESQDIESRIKYSATDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -