Basic Information

Insect: Baronia brevicornis
Gene Symbol: -
Assembly: GCA_031353405.1
Location: JASFAT010002603.1:383272-386949[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00048 0.031 14.9 5.8 1 23 206 228 206 228 0.93

2 11 5e-05 0.0032 18.0 0.7 1 23 234 257 234 257 0.98

3 11 3.9e-06 0.00025 21.5 0.3 1 23 267 289 267 289 0.96

4 11 0.0025 0.16 12.6 2.1 2 23 297 318 296 318 0.94

5 11 0.0012 0.077 13.7 1.4 1 23 324 346 324 346 0.98

6 11 0.013 0.84 10.4 3.9 1 23 352 375 352 375 0.96

7 11 0.0098 0.62 10.8 1.9 2 23 381 400 380 400 0.96

8 11 2.3e-07 1.5e-05 25.4 1.8 1 23 406 428 406 428 0.98

9 11 8.3e-06 0.00053 20.4 1.4 1 23 434 456 434 456 0.98

10 11 3.6e-05 0.0023 18.4 0.3 1 23 462 485 462 485 0.97

11 11 0.00046 0.029 15.0 1.2 1 21 491 511 491 512 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00048	0.031	14.9	5.8	1	23	206	228	206	228	0.93
2	11	5e-05	0.0032	18.0	0.7	1	23	234	257	234	257	0.98
3	11	3.9e-06	0.00025	21.5	0.3	1	23	267	289	267	289	0.96
4	11	0.0025	0.16	12.6	2.1	2	23	297	318	296	318	0.94
5	11	0.0012	0.077	13.7	1.4	1	23	324	346	324	346	0.98
6	11	0.013	0.84	10.4	3.9	1	23	352	375	352	375	0.96
7	11	0.0098	0.62	10.8	1.9	2	23	381	400	380	400	0.96
8	11	2.3e-07	1.5e-05	25.4	1.8	1	23	406	428	406	428	0.98
9	11	8.3e-06	0.00053	20.4	1.4	1	23	434	456	434	456	0.98
10	11	3.6e-05	0.0023	18.4	0.3	1	23	462	485	462	485	0.97
11	11	0.00046	0.029	15.0	1.2	1	21	491	511	491	512	0.96

Sequence Information

Coding Sequence: atggcTAGTGTAAAGAATAGATCGAAAGCACCTAAAACTGCCGCTAATAAGAGTAAGGGTCGAGGTAAAAATACTACATCCTCTACAGGTGTGAAGAATGGATCAAAATCACAAGCAGGTATGAAAAGGAAATGTAGTTTAAAATCTTTAACGCCAGATGAAAAAgtgcaatatattttaaaaaaagatcttttggtaaaaaataaactaatgttaaataataaaaatggtaaaattaataagaagcGTTTAAAAATAGTCAAAGAAAGCTTAATGGCAAAGAGTATCAAGCCAAAGAAAAAAGATCGTTTAAAActttttggtaatattttaaaaagtgaatTACTGATTGAAGATTCAAATACATCTAAAGGACCAAATGTAGCATTTCATAAAAGATTCAACAATAATGATGCTGGACTAAATGACCAGAATAAAAGTGATAGCAAAATTGATGGTCTAAGTCATGAAAAAGATGCaaagcaaaatataaatgttgaaGGACAAACcaatttgaaaacaaatgaaGAAAGTCACCAAAACACCAATAGTAATTTTCAGATTATAGACAATGAATTTGTGGGAAGGAACAATGCTTCCAATTCAACTCCTAAGTTTCATTGTGATTGTTGTAACAAAAGTTTCAGAAATAAATCTGCATTACGTAGACATATTTATGCACATCTTAATGAAAAGTTATATCCATGTAATTACTGCACAAGAAGTTTTTACAGATTAGCGAGTATGGAGATTCATGTGAAAACACAACATGCTGATAGCAATGAAATATCAAGTTCATATGTATGTCAGATTTGcgaaaaatcattttcaaaaaaagcaAGCTTAGAATCACATTTGAGTggtcatataaaaaaagaaaatcccTGCAAGTGTGTCAATTGTGATAAACAATTCCCTAATGAATTATTGCTAAAACGACATGAAAAAGAGCATTCAGAAACTGACAGCTTCCAATGTAAACTTTGTAATGTGAGCTATGAAAATAAGACGAAGTTATCACTACATGCCAAAAGTCATTTGAATATTAAAGATTATATCTGTCAACATTGCGGTAAAGATTTTCTACGTCTCAATTCAATGAGACGTCATGTGCAGATTTGTCATGTAGGACACAGAATACAATGTCCAATATGTAAGAAGTATTTGAAAGGACATTTAACAGAGCATATGCGTACACATGAAAAGAAAAGGCCACATGAATGTCCAGATTGTGGGCAACGTTTTACCCAATCCACCCAATTAAATGTTCATCGTCGTTCACATACTGGTGTTCGGCCATATCCTTGCAGAATTTGTAAACGTCCATTCACACATTCTAATGCTTTGATGCTTCATATCAGGAGACATACTGGTGAAAAACCATTTCCGTGTGCAATGTGTCCACTATCATTTTCACAATTACCACATATGAAGGCACATATGCGTAACATTCATGGTAAAGAAAATGcatataaatgtgaaaaatgCAAGCAATTCTTTAAGTTAAAGGCCCAACTAGAAGATCATCTGAAATCATGTAAAGTTGGAGACAAAGAGTTATCCTTCGAAGAGCAAATTCAGGCATCAGTGCAAATAGAAGAAGTTGAAGTTGAATCGGTTATGAGTTTATCACGAATGAGATTCCTGCTGGCTCTTCTTCTTACTATGATTGCAACCAAAGAGAAACTGAAATATCTAGGGTTCAACAAACGTCTAATAGATGATATTATTGTGGAGTCTCTTGAGGCAATGGGTCACACACCCTGTAAAGATGAATCTTTACCGCCTATAACGTGTCTCAGAAAGAACATTGAAATTTTGCTGAATGGAACAATTCCTaaaaagaaaatggaaaaaTTTCGAAAGGAGAACAAAACAACAGAAGAATTGCTGGAATTGTTAACAGATGAAAAGAAAagttaa
Protein Sequence: MASVKNRSKAPKTAANKSKGRGKNTTSSTGVKNGSKSQAGMKRKCSLKSLTPDEKVQYILKKDLLVKNKLMLNNKNGKINKKRLKIVKESLMAKSIKPKKKDRLKLFGNILKSELLIEDSNTSKGPNVAFHKRFNNNDAGLNDQNKSDSKIDGLSHEKDAKQNINVEGQTNLKTNEESHQNTNSNFQIIDNEFVGRNNASNSTPKFHCDCCNKSFRNKSALRRHIYAHLNEKLYPCNYCTRSFYRLASMEIHVKTQHADSNEISSSYVCQICEKSFSKKASLESHLSGHIKKENPCKCVNCDKQFPNELLLKRHEKEHSETDSFQCKLCNVSYENKTKLSLHAKSHLNIKDYICQHCGKDFLRLNSMRRHVQICHVGHRIQCPICKKYLKGHLTEHMRTHEKKRPHECPDCGQRFTQSTQLNVHRRSHTGVRPYPCRICKRPFTHSNALMLHIRRHTGEKPFPCAMCPLSFSQLPHMKAHMRNIHGKENAYKCEKCKQFFKLKAQLEDHLKSCKVGDKELSFEEQIQASVQIEEVEVESVMSLSRMRFLLALLLTMIATKEKLKYLGFNKRLIDDIIVESLEAMGHTPCKDESLPPITCLRKNIEILLNGTIPKKKMEKFRKENKTTEELLELLTDEKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -