Basic Information

Insect: Baronia brevicornis
Gene Symbol: -
Assembly: GCA_031353405.1
Location: JASFAT010002969.1:53670-62282[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.015 0.94 10.2 0.2 1 23 53 76 53 76 0.92

2 27 0.011 0.71 10.6 1.0 2 23 150 171 149 171 0.97

3 27 0.064 4.1 8.2 0.3 2 21 176 195 175 197 0.92

4 27 0.0043 0.27 11.9 2.9 1 19 202 220 202 222 0.91

5 27 0.63 40 5.1 3.3 2 23 234 256 233 256 0.91

6 27 0.00045 0.029 15.0 5.4 2 23 263 284 263 285 0.95

7 27 2.5e-05 0.0016 18.9 3.5 1 23 291 313 291 313 0.98

8 27 3.9e-06 0.00025 21.5 0.1 1 23 319 341 319 341 0.99

9 27 0.16 10 7.0 1.4 1 15 347 361 347 363 0.88

10 27 0.16 10 6.9 0.2 1 23 428 451 428 451 0.93

11 27 0.24 15 6.4 0.5 2 23 476 498 475 498 0.95

12 27 0.68 43 5.0 3.7 2 23 521 542 520 542 0.96

13 27 1.3 81 4.1 0.0 1 23 546 568 546 568 0.83

14 27 0.44 28 5.6 1.8 1 19 573 591 573 593 0.89

15 27 0.04 2.5 8.9 2.0 2 23 604 626 603 626 0.92

16 27 0.00014 0.0086 16.6 0.7 2 23 634 656 633 656 0.96

17 27 0.00083 0.053 14.2 1.8 1 23 662 684 662 684 0.98

18 27 0.00015 0.0096 16.5 3.4 1 23 690 712 690 712 0.99

19 27 0.0002 0.013 16.1 3.4 1 23 718 741 718 741 0.97

20 27 1.1 71 4.3 0.1 2 23 865 887 864 887 0.93

21 27 0.058 3.7 8.3 0.6 2 23 910 931 909 931 0.97

22 27 0.099 6.3 7.6 6.1 1 23 962 985 962 985 0.95

23 27 0.022 1.4 9.7 2.4 2 23 993 1015 992 1015 0.94

24 27 0.00036 0.023 15.3 0.3 2 23 1023 1045 1022 1045 0.96

25 27 0.00061 0.039 14.6 2.1 1 23 1051 1073 1051 1073 0.98

26 27 0.0028 0.18 12.5 3.3 1 23 1079 1101 1079 1101 0.99

27 27 0.021 1.3 9.7 6.7 1 23 1107 1130 1107 1130 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.015	0.94	10.2	0.2	1	23	53	76	53	76	0.92
2	27	0.011	0.71	10.6	1.0	2	23	150	171	149	171	0.97
3	27	0.064	4.1	8.2	0.3	2	21	176	195	175	197	0.92
4	27	0.0043	0.27	11.9	2.9	1	19	202	220	202	222	0.91
5	27	0.63	40	5.1	3.3	2	23	234	256	233	256	0.91
6	27	0.00045	0.029	15.0	5.4	2	23	263	284	263	285	0.95
7	27	2.5e-05	0.0016	18.9	3.5	1	23	291	313	291	313	0.98
8	27	3.9e-06	0.00025	21.5	0.1	1	23	319	341	319	341	0.99
9	27	0.16	10	7.0	1.4	1	15	347	361	347	363	0.88
10	27	0.16	10	6.9	0.2	1	23	428	451	428	451	0.93
11	27	0.24	15	6.4	0.5	2	23	476	498	475	498	0.95
12	27	0.68	43	5.0	3.7	2	23	521	542	520	542	0.96
13	27	1.3	81	4.1	0.0	1	23	546	568	546	568	0.83
14	27	0.44	28	5.6	1.8	1	19	573	591	573	593	0.89
15	27	0.04	2.5	8.9	2.0	2	23	604	626	603	626	0.92
16	27	0.00014	0.0086	16.6	0.7	2	23	634	656	633	656	0.96
17	27	0.00083	0.053	14.2	1.8	1	23	662	684	662	684	0.98
18	27	0.00015	0.0096	16.5	3.4	1	23	690	712	690	712	0.99
19	27	0.0002	0.013	16.1	3.4	1	23	718	741	718	741	0.97
20	27	1.1	71	4.3	0.1	2	23	865	887	864	887	0.93
21	27	0.058	3.7	8.3	0.6	2	23	910	931	909	931	0.97
22	27	0.099	6.3	7.6	6.1	1	23	962	985	962	985	0.95
23	27	0.022	1.4	9.7	2.4	2	23	993	1015	992	1015	0.94
24	27	0.00036	0.023	15.3	0.3	2	23	1023	1045	1022	1045	0.96
25	27	0.00061	0.039	14.6	2.1	1	23	1051	1073	1051	1073	0.98
26	27	0.0028	0.18	12.5	3.3	1	23	1079	1101	1079	1101	0.99
27	27	0.021	1.3	9.7	6.7	1	23	1107	1130	1107	1130	0.97

Sequence Information

Coding Sequence: ATGGTTACGAAAAAGGTCAAAAGCAAAGGTCACGATGCAAGCTCGAACGACACCAAGACACAACACCGACTCGAATTGGACAAGCAGTATTACAATTTAGACAGAATACTGCAATGGTCGAACGCTACTGTTATACGTAGTCGCGGTGGGGTGGGATACACTTGTTCGTTTTGCACCAACGAGTATCCGCGTCCGGCCGATTTGAAAACACACACAATCGACGCGCACAAACCCACCAGTATACGCACGGCTCACTTCATGACGAAAGTCGATTTAAATTCGTTTTACGTCAAAGTGGACATCACTGGTCTGAAATGCGATCTGTGCGACAGCGGCCTCGATAACATCGAAGATTTCGTCGGCCATCTGGTGACGTTCCACCGAAAGGATATGTACACGGATATCGAATCTCGTCTCCTGCCGTTCAAGTTCGACGCGGAAAACTTGAGGTGTTTCATGTGCGCGACCGAGTTCACCAAGTTCAAGATGCTATTGGAGCACATGCGGGTCCATTACGCCAATATCTCGTGCGGCGTTTGCGGGGCGGGCTTCGTCAACACGAAGCAACTGGTCACTCACGCCAGATGTCACAATATAGGTTCCTTCAAGTGCAATCACTGCGATAAATCATTCAATTCTCTGGCGAAGAGGAAATCGCACGAGAAGTGCGTGCACAACACTCGAAGGGAAACTATAAACAAGTGCGGCTTTTGCGACGAAACTTTTAGGTATTACCTGCACAAGGAGAAGCATCAGTACGAAAAACATGGCGTGCCGGTTATTCGGAAGTGTCACGCTTGCGACAAAACTTTCTCCACGCAACAGGCGTACAGGGTCCACTTGAAGAGGCACCATCTGTTGGAGAGGAAATTTCAGTGCTCCCAGTGCGAAAAGAGTTTTTTCTCTTCGCACGATCTGAAATGGCATATGGTGAAACATACGAAAATCCGCAGGTTTCAGTGCGCGGTGTGCGATAAGGCTTATCCGAGGAAGTCGACGCTGGTGGAGCATTTGCGAATACATACGAATGATAGGCGATTCGAATGCGATGTTTGCGGATGGAAATTCGTGCACAAGTGCAGCTGGCGTGGTACTCATCGTACCATCAAAGTCAAAGACAATATAACAACAGACGATGAAAGCAAAGCGGAACAAGGTGACATTTTCGAAAGGAACGGAAAAGTCAAAAAAGGAAAAGAGTTGTCTAAGCATCGGACAAATATGAGAGAGATACTGACAAATTCAAACGCAACACCAATCAGATGTCACGGAGGAATAGGTTACGCTTGCAGTTTCTGTACTGATCAATACCCAGATCCCGCTGACCTAAAGAAGCACACGTTAGAATCTCATCCGAATGTTATCAAATTCATGAAAGGGAAGGATCTGTACAGATTTCACGTCAAACTGGATATAACCGGTTTGCGTTGTAAAATCTGCGATAGCGACATAGACACACTAGAACAGCTAACTGACCATTTGAAACACGTGCATCAGAAAAATATACACACGGACATAAAAAACCAGATACTGCCCTTCAAATTCAACGGTGATACGTTACGTTGTTTTATCTGCTTGAACAAATTCCACAAGTTCAAGACTTTGCAGGAACACATGAACGTCCACTACAGAAATTTCATCTGCGAGGTCTGCGATGCTGGGTTCGTCACCCGCGGCATCATGATCCAGCATTCCGAGAGTCACAAATTTGGCAAATTCAACTGCGATTTTTGCCCAAAGGAGTTCAATACGCTCCGCAAGAAGAAATCGCACGAAAAATGCGTTCACACTCATTCCAACACGCTCAACAAATGCGGGTACTGCAACGAGAAGTTCAAGGACTATCGGAAGAAGCAAAAGCATCTGACCGAAGCGCACGGAGTACCATCGCAGGCACTCCAGTGCGAGGCATGCGATAAAACCTTCGTCGGACAAAAGCACCTGAGCGTTCACATAAAGAGGGTCCATTTGATAGAGCGGAGGCACAAATGTACGGAGTGCGAAATGACGTTTTTCTCTTTGGCCGAGATGAAAATACACATGTTGAAGCATACGGGCGTACGTGATTTTAAGTGTACGGTGTGCCACAAGTTGTACGGACGGAGGAGGACCCTCCAGGAGCACATGCGGATCCACGCTGACGATAGGCGTTTCAAATGCGAACACTGCGGGCAGGCTTTCGTGCAGAAGTGTAGCTGGCGTGGTCATATGCGTGCCAAGCACGGTATTCAACGTGCGAAAAGAAAGTTGACAGACAACGATTATGAACTAGAAAAGAAGGTtccattagaaaataaaaaaataaaagaaaagataacAGAGGTACAAGATTGTCCGAAAAAACCGTATAAAGGGGCAGAACTAGAAAAACATCGGGCGAACTTGattcaaatattgaaaaattcaaATGCGACTCCAATACGATGCCGAGGTAGTTTCGGTTACGCGTGTTGCTTTTGCACAGACCAATATCTCAATCCAGCCGATTTGAAGAAACACACAATGGAAATGCACGAAGATATAAACGAAACCAAATACATGAAACAAAAGGATATGCACAAATTcaatgtgaaaatggacataaCAGATTTACGTTGTAATATATGCGAGGAAAACATGGAAACTATAGAACAGCTATTGACACACTTAAAAGATGTGCACAAGAAGAAAGTGTTCACGGAATTGAAGAATCAAATGCTACCATTTAAATTCAATGGTGACGTCATGAGATGTTTTATGTGCTCGAATATTTTCCCGAAATTCAAAGCCTTGCTGCAACACATGAACATACATTACAGAAACTACATTTGCGCAGAATGCGACGCCGGCTTCGTCTGTCTGTCAATTCTAAACGAACATTCAAAAATGCACAGACTGGGCACGTTCCACTGCGATTACTGTCCGAAAGTCTTCAACACGCACCGAAAGAAGAAACTGCACGAGAAGAGCCTGCATCAGCAGTCCGATCTGAAGAACAAATGCTTGCATTGCGATGAAAAATTTAAGTACTACAGGCAGAAGGAGAAGCATATGATAGCGGTGCACGGAATGCACTGCCCGCCGCTCCAGTGCCAGGCGTGCGAGAAGTCGTTCGTGAACCAGAACCTGTTGACGATCCACGTGAAGAGGGTGCACTTGATCCAGCGGCCATTCAAGTGTCCGGAGTGCGATAAGCACTTCTTCACGATGGTGGAAGTGAGGAATCACTTGACCTCACACACGGGTGTGAGGAAGTTTCAATGCGATATATGTCACAAGGCGTATTcgttaaagaaaatattgcacGAGCATATGCGTATACATTCAGACGACAGGCGTTTCAAGTGCTGTCACTGTGGGCAGGGGTTCATACAGAAGTGCACTTGGCGGGGGCACATGCGTGCTAAACACGGCGAACAAGTCTAA
Protein Sequence: MVTKKVKSKGHDASSNDTKTQHRLELDKQYYNLDRILQWSNATVIRSRGGVGYTCSFCTNEYPRPADLKTHTIDAHKPTSIRTAHFMTKVDLNSFYVKVDITGLKCDLCDSGLDNIEDFVGHLVTFHRKDMYTDIESRLLPFKFDAENLRCFMCATEFTKFKMLLEHMRVHYANISCGVCGAGFVNTKQLVTHARCHNIGSFKCNHCDKSFNSLAKRKSHEKCVHNTRRETINKCGFCDETFRYYLHKEKHQYEKHGVPVIRKCHACDKTFSTQQAYRVHLKRHHLLERKFQCSQCEKSFFSSHDLKWHMVKHTKIRRFQCAVCDKAYPRKSTLVEHLRIHTNDRRFECDVCGWKFVHKCSWRGTHRTIKVKDNITTDDESKAEQGDIFERNGKVKKGKELSKHRTNMREILTNSNATPIRCHGGIGYACSFCTDQYPDPADLKKHTLESHPNVIKFMKGKDLYRFHVKLDITGLRCKICDSDIDTLEQLTDHLKHVHQKNIHTDIKNQILPFKFNGDTLRCFICLNKFHKFKTLQEHMNVHYRNFICEVCDAGFVTRGIMIQHSESHKFGKFNCDFCPKEFNTLRKKKSHEKCVHTHSNTLNKCGYCNEKFKDYRKKQKHLTEAHGVPSQALQCEACDKTFVGQKHLSVHIKRVHLIERRHKCTECEMTFFSLAEMKIHMLKHTGVRDFKCTVCHKLYGRRRTLQEHMRIHADDRRFKCEHCGQAFVQKCSWRGHMRAKHGIQRAKRKLTDNDYELEKKVPLENKKIKEKITEVQDCPKKPYKGAELEKHRANLIQILKNSNATPIRCRGSFGYACCFCTDQYLNPADLKKHTMEMHEDINETKYMKQKDMHKFNVKMDITDLRCNICEENMETIEQLLTHLKDVHKKKVFTELKNQMLPFKFNGDVMRCFMCSNIFPKFKALLQHMNIHYRNYICAECDAGFVCLSILNEHSKMHRLGTFHCDYCPKVFNTHRKKKLHEKSLHQQSDLKNKCLHCDEKFKYYRQKEKHMIAVHGMHCPPLQCQACEKSFVNQNLLTIHVKRVHLIQRPFKCPECDKHFFTMVEVRNHLTSHTGVRKFQCDICHKAYSLKKILHEHMRIHSDDRRFKCCHCGQGFIQKCTWRGHMRAKHGEQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -