Bbre013980.2
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- -
- Assembly
- GCA_031353405.1
- Location
- JASFAT010003422.1:358856-369735[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0023 0.14 12.8 1.2 2 23 207 229 206 229 0.95 2 23 0.25 16 6.4 0.3 1 22 616 637 616 637 0.95 3 23 4.9 3.1e+02 2.3 0.3 1 22 679 700 679 702 0.82 4 23 0.0032 0.2 12.3 0.4 3 21 713 731 711 732 0.94 5 23 1.1 69 4.4 0.0 3 23 741 762 739 762 0.89 6 23 0.0044 0.28 11.9 0.1 3 23 783 804 781 804 0.96 7 23 0.0014 0.089 13.5 2.5 1 23 810 833 810 833 0.95 8 23 0.092 5.9 7.7 0.0 1 23 859 882 859 882 0.90 9 23 0.004 0.26 12.0 3.5 1 23 887 909 887 909 0.97 10 23 0.0034 0.22 12.2 0.6 1 23 915 937 915 938 0.95 11 23 0.0017 0.11 13.2 1.3 1 23 952 974 952 974 0.97 12 23 0.00013 0.0083 16.7 1.8 1 23 1023 1046 1023 1046 0.97 13 23 0.002 0.13 13.0 1.1 1 23 1107 1130 1107 1130 0.96 14 23 0.00089 0.057 14.1 2.3 2 23 1154 1176 1153 1176 0.95 15 23 0.017 1.1 10.0 0.1 2 23 1182 1204 1181 1204 0.94 16 23 0.0071 0.45 11.2 0.2 1 21 1248 1268 1248 1269 0.95 17 23 0.00091 0.058 14.0 0.6 1 23 1279 1301 1279 1301 0.93 18 23 8.2e-05 0.0052 17.3 0.3 2 23 1391 1413 1391 1413 0.93 19 23 1.3e-07 8.4e-06 26.1 1.1 3 23 1420 1440 1419 1440 0.98 20 23 0.02 1.3 9.8 0.3 2 23 1460 1481 1460 1482 0.94 21 23 0.14 8.6 7.2 0.0 1 23 1506 1528 1506 1528 0.97 22 23 0.004 0.26 12.0 0.4 1 23 1534 1557 1534 1557 0.96 23 23 0.00019 0.012 16.2 0.4 1 23 1565 1588 1565 1588 0.96
Sequence Information
- Coding Sequence
- atgaGTGTGAATTATGATCGTGTTTGTAGGCTGTGCTTGTCATCTCGAAGCGAATTACTGCCGATATTTTCTACCACCAGTTCGGATGACTCGGAACCTCCTCCCTTCGCATCGAAAATTAAAGATTGTGTATCCGTACAGATTAACGAAGATGACGAGCTGCCAACTAATGTTTGTAGGAAATGTATGGACAATGTCAATAATTGGCACATTTTTAAGGCTGTTTGTGAAAGGACACAAAACAAACTACTATCCTTAAACAAAAAGGATGGCAGCCAACTAGAAGagGTGCAAATAAAAAGTGAACCTTTATCTGATGAAGCCTATGATGATGGAGTTGTTATTGATGGGTCATACACTGACCTTGAGAATGAAGCCAGTAAAGTGCAACAAGAAGGCCCACCAATCTTGGCTTCACTTGGTCTCACGCCGAAGAGTGATAAGGGCATGGACAGTGAAAAAGAAGAGGATGAGGAGGAAGAAGAAGACGAGGACATGAATGACTCAGCTCAGCATTATACAAATGTACCTTCAATGCCCGAAGTTTCTATTACGGTTATGCGTCCCAGTGGTGAGACATTGCATGGTCGACAAGGCATTCAGCAACTTGCATCAAAGGAATGCCTTGTTTGTGGACGATCTTACAGATACTCGCATAATGCCCGGCGACATGAACTTACTGCACATAGCTTTGACAGATACACAAATAAAGTAGCTACCAAAAAATCACAGTCACATATGCCACCAAAACTAAGGCCTAACCCATTTAATCCCAAAGCAAGACTCATGCCTAACCCTATAAGTCATAAAATGCAACTACTTCCTAAGGGATTCTCGACAAAAATGATGCCGCAAAGAATTGTTTCTCCACCGAAACCCATTCCCATAAAAGCACCAAAAGGGcaacaaaataatttaccaTATCCACTACGAATAAAAGCTTTAAAAGAtttgcaaataaagaaaaaagaaccacaaatcttaaaaactttattaacttcTAAACCTGAAGTGTTGGTATCTGAACCAGAAATCCTGAATTCTGGTGCGGAAAGTCCTGAAACATTGATATCAGAACCTGAAATAGCTTCATTTCAAGTAGAAACAATTTTAACGGAGCCAGATACTTATATAGATCAACCAGAAGACCAGGAGGAACAAGAGGAAGAAGATATAGACAATGAAACTCATAATaaccaaaatcaaaattatgatACTGTTGAAATGGAAACTGACAATGAAATCGAGATCGCACGTCAACAAGAAAACGACGGTGAAGTTGAAGATCATCAAGGTGAACAAGAGACTGAAGAAAATGTCGAAaattatgatgaaaataatattgaaacaaatcAGAGTGATGATCACGACAACGATCGAAACGGTGATACTGTTGATAGTCAAGATTTGCATATTAATGAAGCTGAAAATAGAGATGAAGAGGGCAACAAGGAGGGAGAAGAAGGTGATGAAGATAGGGGTAATGATGATCAAGATCAGGAGGTCAATCACGAAGaaaatgaagatgatgatgatgacttacCAATGAGTTTAGCACCTGTAGTTGAAATTAATGAAGATCTGCAGGCGAATTCTTTTAACAGTGAGATGAATGACGAAGAAGACGACGAAACAGGAGATCAAAATGATACGGTAGATGGAGAGGTTAAAGAGCTTGACCctgataaaatttatgttacaaAAACTCAACGAGATTTTATCCTTAAATATCGAGATATTATTGaacaaattaatacaaaaagatGCCTTTGTTGTGACAGAGAACATCCACGGCGCAAAGCTGTTATTCAGCATTTGCAGAAAAATGGACACAAAGTCCCTAAACATACGTGTTATAATTGTGTAGTAACGTTTGGACACATTGGCGCTTTATTGAGTCACATGCGATCAAATACTTGCACAGATTTgtggaaaattatttataatgaaaatggaATCACTGATGACTTGGTCTTGGAAGATGAACCTAAAGATGTTAAGGTTCagtataaagatatatttaatgcAAGGTCATACGCATGCAAGTTATGCCCAGCAAAATTCCAATTAAAACAGTTTATAATGAAACATGTACTAGATGTTCATGAAGATGGACAGTCTATGGTAACTCTTGCATGTGTGCATTGCGGATCAAGATTCAAAGACAAGGCTTTATGGAAGAAGCATATTCGTAATGGAGAATGTACAGTTTATATTGCGTGTGATTTGTGTACAGAGAAATTTATCAATATGCAAGCTTTTAATGACCATGCACTAGCTGTTCACGCTGGAAGCTTCGATCAATCTGATAATCAGAACAAGTGTGTAGATGGACGGCCAACAGATTGTCCTATCTGCGGTAAGAAAAACAGTAGCTATCCAAATTTGGTTAAACATTTGAAGATTATACATAGTGAAGAAAAACCTCATTATTGCCAACATTGTGATTCCAAATTTGAACAAGCTGCCGATCTTAATAAACACATTTACATGGAGCATTCTGACCGAACGCTAGGTATGAATTCCAACGAGCCCGACATGTCTCTAGTTAAAGAAGAGGCGGAGGAATACCATTACTCATGCACAGAATGCAATGCTATCTTTGAAACCGTTGATGCCTGGACAGATCATCAGGTAGCTGAACATAACCAAGTCGCTCATCACTGCGATCAATgtgataaaaagtttttaagaccTTCTGAACTGGCGGAgcataaaaatacacatttgaGAGTCAAATTTTATCCATGCAGTGTTTGTCCAAATTCATATAGTACGCCACAAAAATTATCCGAACACGTTCAACAACATCACCCCGGTGTAACAACCTTCAATACGAGTATTGAATCGGAATTTTTCTGCGACATATGTATTCGTTCTTTCAAAAGTCGCCAAGCATATTCGAACCACATGCGCATACATGCTAAAGTCCCAACGACCAATAGAAGGCCTGGAGATTCTAAAGGATTTGCACCACAAATTGTTGGCAAACCAATCAGACAATTTTCAATGACACAACCaggttttgtttcatttaagcCGAATTGTGTTGTTCCCAACGCGCCTTATTCATGTGATATCTGTGGAAAAGGTTTCATGCACAAGAAAAATATCTGGAAACATAAAAAAGTGTTACACGCTGATCTTGTAAACGATAGAAATGATAGTGAAGAGAATACGATGCAAGCATCTACCGAGGAGGATGAATACAATGTGGACGAAAATGGAATCGCATTATCTACGCCACAATTTAATAGTTTCAATTTTGCCAATTTAGCAAATAATTTTCAACAGCAGACCCCTCAAGATCCTATGCCTTACTCTTGCGAATTGTGCTCCAAACGCTTTCCAATTAGGACTAGTTTGTGGAAACATAAGCGCGCTAAACACGGGATCATTAACGCCAGCTCTATGGGCTCTGATCCTCAATATACGCCAAGTGAAGGCAGTAGTAGATCAAGCTGTACGatttgtaaaataacatttaccGACAAAAAGTCCTACTATCGTCACAGAAAAAATGTCCACAAATCTTCATCGCAGATGTGCAAAATATGTGGGAAACCTCTAAATTCGACTGTAGAGTTGTACGAGCATCTTAAAGCCGCTCACGCTCGTGAGTTATTAGGCTATAATGCTGGTCAAGGATCAAGCAAATCGCAAGAAATGGTACAAGAATTAGAAATTGAATATGATGGTGATCAGGATTCAGTTGATCCTAGCGTCGAGTATCAGGCCCGATACCCATGTGATACATGTGGTAAACAATTTGTTGGATTACTCGCATTGCAAAACCACCAATGCGTTAACCAGGTACAGTCCTCACCGCAGACTTTCGACTGCGAGATTTGTCATAAAAGTTATACGTCCATTGCTGCTTTGAAAAGTCACCGCGGTTGGCATTTACGTTCGCCGGACGGTAAGGCGGCTGCTAATAATTCTGGTCTGTGGATGCCTCAGCATAAAGTCACGAGTAAAGTAAGCAAATACGAGGTAGTGGATGCTTCGCAACTCGCCCGCGTCACGCATTCAACTCCAGCGAGCGTAGCTAAAAGGAGATTACCTCCCGAAGTTGAAGTGACTGTAGTTAATCCAAACAAGAAAATGCGTTCGGACGATTCCGTTGAAATGGAACAACAAAACAATTCATCTACAGGAATGGAAGATAGATACTGTACGATTTGCGACAAGGAATTTACAAAGCGGGCCGCTTATCAGCGACACATGGACGAGGTTCATCAGCCGAATTCCGTGTTTTGTCCTGTGTGCGACAAGAGTTTCACGCGAAAGTCTACATTGATTGTACACATGAAGAAACATTATGAAAGTGGAGAGGGTAGTTCGAGTGCAACTGGTCAACTGGACGACGAAGGGAATACTTGCGATCTTTGCGGCGCACAGTACGATAATCCAATGGCATTGAAGGCTCATAGGGTAAGACACCATGGTGAAGATTCTGCTGAGTCTGAAGAGGACGAAGGCGATGGCAGTATAACTGTACCGCCACCTGGGGAATTCACATGTGCGCAATGTGGCGATGGTGTCGCAACCCCCCGTGATTTAATCGCCCATCGCACCATGCACGCCACGCCAACCAAATTCTACTGCAACATTTGCAAAGTTTACTTTGCTAGAGCAATAGACCTCTCGTCACACACGAGGGCGAGACACGCGGAGAGTGAAAAGACTTTTTTTCCATGCGCCATGTGTGACCGCTTCTATATGAACAAGAAGAGTTTACAACGGCACATCGAGATGGCCCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRSELLPIFSTTSSDDSEPPPFASKIKDCVSVQINEDDELPTNVCRKCMDNVNNWHIFKAVCERTQNKLLSLNKKDGSQLEEVQIKSEPLSDEAYDDGVVIDGSYTDLENEASKVQQEGPPILASLGLTPKSDKGMDSEKEEDEEEEEDEDMNDSAQHYTNVPSMPEVSITVMRPSGETLHGRQGIQQLASKECLVCGRSYRYSHNARRHELTAHSFDRYTNKVATKKSQSHMPPKLRPNPFNPKARLMPNPISHKMQLLPKGFSTKMMPQRIVSPPKPIPIKAPKGQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGAESPETLISEPEIASFQVETILTEPDTYIDQPEDQEEQEEEDIDNETHNNQNQNYDTVEMETDNEIEIARQQENDGEVEDHQGEQETEENVENYDENNIETNQSDDHDNDRNGDTVDSQDLHINEAENRDEEGNKEGEEGDEDRGNDDQDQEVNHEENEDDDDDLPMSLAPVVEINEDLQANSFNSEMNDEEDDETGDQNDTVDGEVKELDPDKIYVTKTQRDFILKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSMVTLACVHCGSRFKDKALWKKHIRNGECTVYIACDLCTEKFINMQAFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMNSNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQHHPGVTTFNTSIESEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRRPGDSKGFAPQIVGKPIRQFSMTQPGFVSFKPNCVVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVNDRNDSEENTMQASTEEDEYNVDENGIALSTPQFNSFNFANLANNFQQQTPQDPMPYSCELCSKRFPIRTSLWKHKRAKHGIINASSMGSDPQYTPSEGSSRSSCTICKITFTDKKSYYRHRKNVHKSSSQMCKICGKPLNSTVELYEHLKAAHARELLGYNAGQGSSKSQEMVQELEIEYDGDQDSVDPSVEYQARYPCDTCGKQFVGLLALQNHQCVNQVQSSPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKYEVVDASQLARVTHSTPASVAKRRLPPEVEVTVVNPNKKMRSDDSVEMEQQNNSSTGMEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSSATGQLDDEGNTCDLCGAQYDNPMALKAHRVRHHGEDSAESEEDEGDGSITVPPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFYCNICKVYFARAIDLSSHTRARHAESEKTFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01155687;
- 90% Identity
- -
- 80% Identity
- -