Bbre017305.1
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- -
- Assembly
- GCA_031353405.1
- Location
- JASFAT010004575.1:16117-24071[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-07 0.00025 20.9 0.0 2 37 245 281 244 287 0.90 2 2 5.3e-12 9.7e-09 35.0 0.0 2 35 388 422 387 430 0.90
Sequence Information
- Coding Sequence
- ATGGCTCTGATAAAAACTGAAAAGTTATATGTCGGGAGTTGTAAATGTTGCCTTAATGAaggtgaattaaaaaatatgtggacaCCGTATATATTTGAAGGAGAAACTGAAATTTATGGATATATGTTGATGGATTGTTTTGCTCTTTCGTGGGAACAGTCAGAAGATTCAGAGTTTATTGAACAAATATGTGAAATATGTATTGCAAAGCTGCGCAGCGCACTTGCCTTTCGACGCGAAGTACTTCTTAGTGATGCATTAGTGCAAGAATATCGtaaaaattatgaacaaaacacagtTACAACAATCAAAAGTGAGGAAGATGATGAACTAGCATCGTTGGAAAGTGAGGCATCTATAAAAATTGAGATCGAACCAGATTATCAAGATGTGGAATACCTAGAAATAGATGAAGGAATTAATTATGATGAATTGATTGATACTGATAATGTTGGAGAATATAAACTAGATCAGGCAGAAAATTGCGAGAGAAAAATACCAATGAAACTGTCAATGGAATACAggggaaagaagaagaaatttcAGTACGAAGAGAGCTTGACGCAGGTTGAACAGCTTCTTCATCCAAAGCGCAGGGTTCGAGCACAGCGTCAGGGCAACGACATAAAAGAGCATGAAACCATAGCGACGGAAGGCGTAAAAAGGAGGAAGTGGCCAAAAAAGAGGAAATTGGAGAAGGAGGAAAGGAACATAACGTACAGGCAATATGAGGAGGCCGATTTGGTTAAAGCTGTGGAGGCTGTCCAAAATAAAGAGATGTCAAGGACGCTGGCATCATACGTGTTCAGAGTACCGCGGCAGACCATATCCTTCAGACTGAAAGCTATCGCAGAAGAGTTGGAGGGCGCGCAGGCCAACCACGTTGAAGTTCCCGTGGATACTGATGAGATGGGACCTGACTGTGAACCGATGGAACACAACGTGAAGAACAAAGAAGACGTGGTGGTTGGTGTGGAAAATAAAGCACACACACCGGAGCCGCCGGCCTTGCTGCAACAGATACCCCCGCCTGTCGCACGCCGTAGAAGAAGGCGCCGTCCGAAAGACGAAGgatatacatataaagaaaacCCGTTCAAAAGGAGGCCAATGGTCGCGCTGAGTAGGGAAGACAGGAATAAGACATACAAACAGTACGATCCGAGCGCTTTGGACAAGGCGGTGGAAGCTGTTCTCAAAAAGAAAATGTCAAAACACAGAGCCGCTTTGTTGCACGGTGTTCCAAGGAAGACCCTAACTGCCAGGCTACTGACCCTAGGAAATCCGAAAGGCAAGTGA
- Protein Sequence
- MALIKTEKLYVGSCKCCLNEGELKNMWTPYIFEGETEIYGYMLMDCFALSWEQSEDSEFIEQICEICIAKLRSALAFRREVLLSDALVQEYRKNYEQNTVTTIKSEEDDELASLESEASIKIEIEPDYQDVEYLEIDEGINYDELIDTDNVGEYKLDQAENCERKIPMKLSMEYRGKKKKFQYEESLTQVEQLLHPKRRVRAQRQGNDIKEHETIATEGVKRRKWPKKRKLEKEERNITYRQYEEADLVKAVEAVQNKEMSRTLASYVFRVPRQTISFRLKAIAEELEGAQANHVEVPVDTDEMGPDCEPMEHNVKNKEDVVVGVENKAHTPEPPALLQQIPPPVARRRRRRRPKDEGYTYKENPFKRRPMVALSREDRNKTYKQYDPSALDKAVEAVLKKKMSKHRAALLHGVPRKTLTARLLTLGNPKGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -