Basic Information

Gene Symbol
Arid4b
Assembly
GCA_031353405.1
Location
JASFAT010002387.1:1-8125[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-30 2.6e-27 95.2 0.1 1 89 278 364 278 364 0.96

Sequence Information

Coding Sequence
atgGGTGATGATCCCCCTTTCTTAGCAGTCGGGACTGATGTAAGTGCAAAATACAAAGGTGCCTTTTGTGAAGCCAAAATAAAGAAGGTAGTTCGAAACATTAAATGcaagGTGACTCTTAAAGCAGGTGGTATCACTACAGTTAATGACGATGTCATAAAAGGTACACTGCGTGTAGGGAGCACAGTTGAAGTCAAACAAGACCCCAAAAAGGATGCCATAGAAGCTGTCATTACTAAAATACAAGATTGCAGTCAATATACTGTGGTAtttgatgatggtgatataaCGACTTTACGTCGATCAGCACTGTGCCTTAAAAGTGGGCGGCATTTTAATGAAAGTGAGACATTGGATCAGTTACCTCTCACACATCCAGAACATTTTTCTACACCTGTGATAGCTGGAAGAAGAGGCAGGAGAGGAAGGGCTCAGTCTGAAGAAAGTGAGGGTGAAGGAGTAACGCGACGCGCTAAGACTGATAGCGAGCCACATGTGGGTCGCGTGGTACTGGTGGAAGCTAGCAGTGGAGCAGAACGCCGCCGTCCACATCAACCCGCCTTCCCTGCGCTTGTTGTGGCACCTACTGCACAAATCAAAGTCAAAGATGACTATTTGGTGAGGTCCTTCAAGGATGGACGATACTACACAGTTCCAAAGAAAGAGGCCAGAGAATTTCGCAAAGGCAGTGCGCCCATGGAGTGGGCAGGTGTAGAGGCCGCATTGCAGTATCTCAACAATGCTGTGCTTCCTCCTCATTGGGACCGGGACACTTTGTTTAATGAGCCTAGGAATACCTCTGACGATAGCTCTGATGATGAGCCACGTGAAGAAAAAGATCACTTCGTAGCACAACTATACAAGTTCATGGATGACCGTGGTACCCCTCTCAACCGGAATCCTACTATTGCCAACAGAGACATAGACTTGTATAGGCTTTTTCGTGTTGTCCAAAAACTTGGAGGCTACAACCGAGTGACAAATCAGAATCAATGGAAGACAATAGCTGATAAGATGGGATTCCATCCTGTAACTACAAGTATCACCAATCTTTGCAAACAGGCATACAAAAAgttcTTACACAGCTTCGAGGACTTCTATCGCAAGCTTGGCGTGACCCTTGTAGCGCATCCTCGTGGCGCTCGGACTCCGCCCGCCGGCCGCTCGCTTATCCGCGATCGTGACAAGCAACCACCGACCTCTTCATCTGCTTCATCCACTCCAACTTCTACTCCCAGCCAGCGTGGCAAAGATAAGGATTCTGACAAAAGCGAGACAGACAAAAGCGATAAGAGTGAAAAAGAAGACAGGGTTGAAAAGGCAGAAAAACCCAATGAGAAGATTCATGTCAGTGATGAAGAAGATAGTGCTGATAATCAACCTCTTGCTGTAACTGCACCAAAGATTGAAAAAGAGAAGGAAAAAGATaaagacaaagaaaaagaaaaggacAAAGAGAAAGAGGAGAAGGATAAAGACAAAACTCCCTTATCAACTATTGTAACTGAAGATAAAGCTGTAATAAAACCTCGTTCACAATCAAAAACCCGTAGCCTTCCAGCAATCAAAACAGACTCACATGAAAAGCAGACTCCTAAAAGAAGACCATTTTTATCTAAAAtggGTGATAACATGAGTGCGGGCAGTCCGCGGGCGTCTAGAAGACCTCACGTCTCGACGGATAGCGACAGTTCAGGACGGGCGTCCAGTAGATGCGGTCCGGCAAAGAAGATGATGAGCCGACGCAGTCAGAGCGCTAACTCTGCGAGTAGCGGCAACACTATTGCGTCCAATGGCAGCAAGCGTCTGAGAAAGAGGAAAAGTACTGA
Protein Sequence
MGDDPPFLAVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGITTVNDDVIKGTLRVGSTVEVKQDPKKDAIEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEESEGEGVTRRAKTDSEPHVGRVVLVEASSGAERRRPHQPAFPALVVAPTAQIKVKDDYLVRSFKDGRYYTVPKKEAREFRKGSAPMEWAGVEAALQYLNNAVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPTSSSASSTPTSTPSQRGKDKDSDKSETDKSDKSEKEDRVEKAEKPNEKIHVSDEEDSADNQPLAVTAPKIEKEKEKDKDKEKEKDKEKEEKDKDKTPLSTIVTEDKAVIKPRSQSKTRSLPAIKTDSHEKQTPKRRPFLSKMGDNMSAGSPRASRRPHVSTDSDSSGRASSRCGPAKKMMSRRSQSANSASSGNTIASNGSKRLRKRKST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01495563;
90% Identity
iTF_01495563;
80% Identity
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