Basic Information

Insect: Balanococcus diminutus
Gene Symbol: RREB1
Assembly: GCA_959613365.1
Location: OY390716.1:28641060-28651422[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0023 0.18 12.5 0.1 1 23 83 105 83 105 0.98

2 12 0.0014 0.11 13.2 0.4 2 23 111 132 111 132 0.97

3 12 0.00018 0.014 16.0 0.3 1 23 303 325 303 325 0.98

4 12 0.00067 0.052 14.2 0.4 1 23 335 357 335 357 0.98

5 12 0.021 1.6 9.5 4.1 1 23 363 386 363 386 0.97

6 12 0.05 3.9 8.3 1.2 1 23 807 830 807 830 0.96

7 12 0.014 1.1 10.1 1.5 3 23 1061 1081 1059 1081 0.96

8 12 0.41 32 5.4 4.8 1 23 1087 1110 1087 1110 0.94

9 12 0.017 1.3 9.8 1.6 1 23 1153 1177 1153 1177 0.94

10 12 0.023 1.8 9.4 0.6 1 22 1251 1272 1251 1274 0.86

11 12 0.003 0.23 12.2 0.3 3 23 1332 1352 1330 1352 0.96

12 12 0.0026 0.2 12.3 4.6 1 23 1358 1380 1358 1380 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0023	0.18	12.5	0.1	1	23	83	105	83	105	0.98
2	12	0.0014	0.11	13.2	0.4	2	23	111	132	111	132	0.97
3	12	0.00018	0.014	16.0	0.3	1	23	303	325	303	325	0.98
4	12	0.00067	0.052	14.2	0.4	1	23	335	357	335	357	0.98
5	12	0.021	1.6	9.5	4.1	1	23	363	386	363	386	0.97
6	12	0.05	3.9	8.3	1.2	1	23	807	830	807	830	0.96
7	12	0.014	1.1	10.1	1.5	3	23	1061	1081	1059	1081	0.96
8	12	0.41	32	5.4	4.8	1	23	1087	1110	1087	1110	0.94
9	12	0.017	1.3	9.8	1.6	1	23	1153	1177	1153	1177	0.94
10	12	0.023	1.8	9.4	0.6	1	22	1251	1272	1251	1274	0.86
11	12	0.003	0.23	12.2	0.3	3	23	1332	1352	1330	1352	0.96
12	12	0.0026	0.2	12.3	4.6	1	23	1358	1380	1358	1380	0.97

Sequence Information

Coding Sequence: ATGAAAATCGATAGCGTAGAAATGATTCACAAAAATGGTAACCTTCTAGGGCAACCTGTCACGTTACCATTGAAACGCAAATCATTACTGATTCTAAACAACAATTCCGTTATCGTCAACAAGAATAAAGTTACCGAAGACGAAACGACGCCATCGGAAAGCAACGACGATAACAACAACGACTACGTAGATCGCAACGACGACGGCCACAGCCACAGCGACGATACGAAATTCTACGACAACGATTTCAAATGTCCCGTCTGTTCGGAGCCCTCGTCCACTGTCGAAGATCTCGAAGAGCACTTGAAACAGCATTCGAATTATAAACCAACATGCACCCATTGCGGAGAAGTATTTGACGATCTGCAAGTCTTGATCAAACATACCGCCATGCACGTGACGGATAAATGTGCCATACGCaataatcaaataaatttgaaaattttaaattatttagagAATAAGAATaccatttaccaaaaattagcCGAAACTATCGATGCTAGTCAATCGTACAGATGTAACTTCTGCAACGAGTTATTTATCGGTAGTCATTTCATGACGCATTGGAAACACTGCAAGCATTTCCAATCGGACGATTCTAATTCCAAACTCACCAATTCGGACGAATCCTATAACGCTGATAAATCGCCACATAACGATTCTCTGGGCGAAGAGAACGAAGAAGCCGAGGAAATGAAGAATCATTTCTTAGCCGGGTTAAACCTGCGAAGTACCAGCGATCGATTATCAGACGACGGGAGCTCGCCGGATAAATCCGAAGTCGTCGCTAAATTATCCAAAGATATTCCTTATGCTAAACAAGCAACTTTTAAAGAGGACGAAttaaacgacgacgacgatccGTTCAAATTAGAAGTACGCGATATGAAAAGAAGAGGAGAATTTCCGTGTCGcatttgtaagaaaattttccgaaatttacGAGCCCTCAAAGGTCACGCTCGTATTCATATTTCGGGTAATAGAGGTATCATGCCTTACGAGTGTAACATCTGTTCGTTCACCACGTCTGATAAATCGGTAGTCATTCGTCATATTCGTAACCACAACGGAGATCATCCTTACAAGTGCCAGTTGTGCTTTTCCACCTTCACTACGAAAGCGAATTGCGAACGACATTTACGCAACGCGCATCGGAAAACATCTCGAGaagatatcaaaaaattattggtcgATTTGAATCATAAACAGAGCAACAATACCGGCTCCAGTTTCAACAACAAACTGCAGACTTTGCTgaccaataataaaaaaccaaatattaataaattactGGCCAAGAAAATACCCGAAGAATTCAGCCAGTCTTTCTGCCCCGAAGACTTCTACAAAAAGGTCAACGAAAGGTCGGAGAATTCCGAAGATGAGAAATCTGTTCGCATGTTCGAAGACAGCATCAACTTCAACGATCGTAACGCTCGCAGCGATCCTGACGATAGCAACAATAGCAACGATAGTAACAATAACAACAACGTAGGGATGCTCAACtcgtgcaaaaaaatgaaagatttcgcCGTCGTTAATCCAATCCTACTGGCAGGTTCCGATTACAAATATCCAACCTTCCATCTACCTCCTGGATTAGACATGCGGCTGTCTAAATCGGAAAAACAATTCTACGAAGCTAACTACAAAACGTACAACGACGTCATTGTTGGCTCCGGACTGATACCGACTATTATTAAAGATAATGGATTTATTAAAGTTCCTTCGTACGAAACTACTACCTTCGTACCGAACGGCAGCTCGAGTTCGGATCACGAAGAACCTCTCGATCTGAGCGTCGACGTGCTAGACTTGAGTAAAAAGAAAGACGACACAGGAGACGACTCAGCTGTCGAAGATCTCTCTGTGAAAACTTGTCGCGAATACAGCAGCGAGAAGTCAGAAACCACGTCTCCTGTTCGCAAACCGCCAGTGAATCCTTTACTGGTCGGTAACCTAAACCAAAGTTTATTCTTCGGTAAAGAAGACCTCAGATACAATTTCCCAAATAACCACCCAATGGTTACCAATTTCTCTTcttattttatgcaaaatcccGCCGTTAACCTGTTcccaaataatctgaaattacAAGAAAGCGAAGACGACCATTCCAAAATACGTCCTCTCATATTTAGTCAACTCGTCGCCAACGCCGCCGAAAGATACGAAGGCCTGCGACAGACAGTACCACCTTTTGTCGACTTCACCAAAAAAGTCGACCCAATCGTGGCCGAAGAATCCATACACGAGAAACCAGCAGAAAAATTCGATACAGCTAAATTCAACCATTCCAAAGATCTACCAGCGAAGCCCCGAAATAACAAATCGTCCACCGTGAAAATGGTCATGAAAGATGGCGTCCTCGTAGAAAAGCAAAAACAACGTCGTTACCGAACCGAAAAGCCCTTCTCTTGCGCATACTGCTCGGGTCGATTCACCCTGCGTTCGAATATGGACCGACACGTCAAACAACAACATCCCGGATTCTGGAGACAACGCCAACGTGGCGGATCTACCAGAATGCAACGAACAAAACATACCAAAGAAGAATCCTCCGAATCGGCGGCATTTCCGTCGACGTTGACTTCCGATACTGTATCCGAGCACGAGACCATGTCCCACGATATGGATTACTCGTCCAGCCACGCTGGTAAACGATCTCCTAGTTATATGAGTGATCACGAAGCTGACACCGAAGATAACGTAGAAAAGTGTAAGAAGAAGAAATCCGACGATATGGATAATTCCATCAtcgacgaagacgacgacgacgaagaatTGGTAATCGACGAAGAAATGGAGGAGCCCGAAAGCGAGGAGAAGTCCAGCGAGCCTTCCACCGCCAATACTTCCATCGAAAAAGATGCCAGCGTCAAGGAAGAGAATCCTGATTTGGCCAGCGTCAGAAGTCTTCTCGATAACGTTTCCACCCAAACTTTTAGTCAGTTTTTTCGACCCGAGGATGATCCCAATAATAAGAATGGAGATGGAAGCGATGACGATGAAGAGGGTTTAGTCGCCGGAAGCAGTAGCGAAGGAAACGGTTCCGGGGGAGAAGAAAATAGAATTTCCAACgaatcgaattcgaaaaattccaacaaatcGACTTCGGGCGATGGcacgaagaaaaagaagagcGCATATTCTTCGGCCCCAAATCGTGTCCACTGCGATTTCTGCTACAGATCGTTCCCATGGGCATCGTCTCTGCGGCGTCATACTCTAACCCATACCGGCCAAAAACCGTACAAATGTTCAAATTGTCCGCTTCTATTTACAACGAAATCCAATTGCGATAGACATTTCCTAAGGAAGCACCGTTCGCAAATGAACGATTCGAATCAGCCAAGTACGGTGACGGTGATCAACAACACTGAAACCGATCCTTCCTCTAGTAACAGATTGATACCGAATTTTTCCACGCGAAATGTACCCGAGCGACCGTTCAAATGCAGCAATTGCCCCAGTTCCACCTTCTCCACGTATAATAATCTGAAAAAGCATATCATTGAGAAACATAACCAAAGCGAAGAGAAATTCGTCGTCGACAATCCTAAATCACCTTCCGGTTTGAACGACTCGCCGAccaaatgtaaaaaagaagACTTGAGTTTATCCGACACCAACGACGCCAGCGTCGTCGAAAAACCCACCCCAGACGAGCCTACCaaagagaaaaataccccTCCGGCGTACGACCAAGCGGCATTTTTCAACCACGTATCTTCCGATTTACCATTCAAGTGCCATCTTTGCGATCGCAGCTTCGGCGAAAGGCAAGAAGCTCTGGATCACATGGGAGAAAGCCATTCGGTCGAGTTTCAGCACCTCATTTGTAAAGGAGCGCTTGACATGAATGTCAAAATGGAGGATTCCATTAATCACGAAGATGGTTTGTTCATGAGCTGCGCCAATAGCGACGAGAACAATGCCGAGCAATGCCGAGGGCGTTTTCCCGATTACTCCAGTCGAAAAGTAATTTGTGCTTTCTGTTTGCGGCGCTTTTGGTCAGCGGAAGATTTACGTCGTCATATGCGAACTCATACCGGAGAACGTCCATTCGCGTGCGACATTTGTCAACGTAGATTTACCTTGAAGCATAGCATGCTTCGACATCGTAAAAAACACTCCAATAAATCGTCCAGTTTCGTTTCAACATCTGGCGAGAATTCACCCATCTCGGACGACGAAGAGCCATCTTCGCCCGGATCGTTTAGCCAACCTATTAATCGAACCAACGACCGAAAACCCGCCGATTTCGTTTCAGTCTCGCACAAGTTGTCGAAGAATTACGATTCCAACAACGATACCAACGAAacgagtacaaattttttccccaattcgGACAAAGAAGCTAAAGCAATCGAAACCAAAATATCCAATATTAAAACTAATCTCTCCAAAGAAGATGGTGTTGATCTCATTGCTAAATTATTGGATATAGACGATAAGTCCTTAGTTGATGAAATGCTAACTAGTAAATCGGCCGATGACGTTGCCAAATTGTTgggtgttcaaaaataa
Protein Sequence: MKIDSVEMIHKNGNLLGQPVTLPLKRKSLLILNNNSVIVNKNKVTEDETTPSESNDDNNNDYVDRNDDGHSHSDDTKFYDNDFKCPVCSEPSSTVEDLEEHLKQHSNYKPTCTHCGEVFDDLQVLIKHTAMHVTDKCAIRNNQINLKILNYLENKNTIYQKLAETIDASQSYRCNFCNELFIGSHFMTHWKHCKHFQSDDSNSKLTNSDESYNADKSPHNDSLGEENEEAEEMKNHFLAGLNLRSTSDRLSDDGSSPDKSEVVAKLSKDIPYAKQATFKEDELNDDDDPFKLEVRDMKRRGEFPCRICKKIFRNLRALKGHARIHISGNRGIMPYECNICSFTTSDKSVVIRHIRNHNGDHPYKCQLCFSTFTTKANCERHLRNAHRKTSREDIKKLLVDLNHKQSNNTGSSFNNKLQTLLTNNKKPNINKLLAKKIPEEFSQSFCPEDFYKKVNERSENSEDEKSVRMFEDSINFNDRNARSDPDDSNNSNDSNNNNNVGMLNSCKKMKDFAVVNPILLAGSDYKYPTFHLPPGLDMRLSKSEKQFYEANYKTYNDVIVGSGLIPTIIKDNGFIKVPSYETTTFVPNGSSSSDHEEPLDLSVDVLDLSKKKDDTGDDSAVEDLSVKTCREYSSEKSETTSPVRKPPVNPLLVGNLNQSLFFGKEDLRYNFPNNHPMVTNFSSYFMQNPAVNLFPNNLKLQESEDDHSKIRPLIFSQLVANAAERYEGLRQTVPPFVDFTKKVDPIVAEESIHEKPAEKFDTAKFNHSKDLPAKPRNNKSSTVKMVMKDGVLVEKQKQRRYRTEKPFSCAYCSGRFTLRSNMDRHVKQQHPGFWRQRQRGGSTRMQRTKHTKEESSESAAFPSTLTSDTVSEHETMSHDMDYSSSHAGKRSPSYMSDHEADTEDNVEKCKKKKSDDMDNSIIDEDDDDEELVIDEEMEEPESEEKSSEPSTANTSIEKDASVKEENPDLASVRSLLDNVSTQTFSQFFRPEDDPNNKNGDGSDDDEEGLVAGSSSEGNGSGGEENRISNESNSKNSNKSTSGDGTKKKKSAYSSAPNRVHCDFCYRSFPWASSLRRHTLTHTGQKPYKCSNCPLLFTTKSNCDRHFLRKHRSQMNDSNQPSTVTVINNTETDPSSSNRLIPNFSTRNVPERPFKCSNCPSSTFSTYNNLKKHIIEKHNQSEEKFVVDNPKSPSGLNDSPTKCKKEDLSLSDTNDASVVEKPTPDEPTKEKNTPPAYDQAAFFNHVSSDLPFKCHLCDRSFGERQEALDHMGESHSVEFQHLICKGALDMNVKMEDSINHEDGLFMSCANSDENNAEQCRGRFPDYSSRKVICAFCLRRFWSAEDLRRHMRTHTGERPFACDICQRRFTLKHSMLRHRKKHSNKSSSFVSTSGENSPISDDEEPSSPGSFSQPINRTNDRKPADFVSVSHKLSKNYDSNNDTNETSTNFFPNSDKEAKAIETKISNIKTNLSKEDGVDLIAKLLDIDDKSLVDEMLTSKSADDVAKLLGVQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01491408;
90% Identity: iTF_01491408;
80% Identity: -