Basic Information

Insect: Balanococcus diminutus
Gene Symbol: -
Assembly: GCA_959613365.1
Location: OY390717.1:57044920-57046704[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.11 8.4 7.3 0.3 5 21 93 109 91 110 0.91

2 16 2.1 1.6e+02 3.2 1.4 2 21 114 133 113 134 0.91

3 16 0.0012 0.096 13.4 1.1 1 23 204 226 204 226 0.84

4 16 8.5e-07 6.6e-05 23.3 4.1 1 23 232 254 232 254 0.98

5 16 4.8e-05 0.0037 17.8 3.5 1 23 259 281 259 281 0.97

6 16 0.00029 0.023 15.3 2.3 1 23 287 309 287 309 0.96

7 16 1.3e-05 0.001 19.6 0.5 2 23 316 337 315 337 0.97

8 16 0.00074 0.058 14.1 1.9 1 23 343 365 343 365 0.98

9 16 0.76 59 4.6 0.4 2 23 372 392 371 392 0.92

10 16 1.2e-05 0.00097 19.6 0.1 1 23 398 420 398 420 0.97

11 16 0.00045 0.035 14.7 1.6 5 23 429 447 428 447 0.95

12 16 1.8e-06 0.00014 22.3 0.4 2 23 454 475 453 475 0.97

13 16 1.1e-07 8.3e-06 26.1 0.2 1 23 481 503 481 503 0.98

14 16 9.2e-06 0.00071 20.1 1.8 1 23 509 531 509 531 0.98

15 16 7.6e-06 0.00059 20.3 3.0 1 23 537 559 537 559 0.98

16 16 0.0013 0.098 13.3 3.7 1 23 565 588 565 588 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.11	8.4	7.3	0.3	5	21	93	109	91	110	0.91
2	16	2.1	1.6e+02	3.2	1.4	2	21	114	133	113	134	0.91
3	16	0.0012	0.096	13.4	1.1	1	23	204	226	204	226	0.84
4	16	8.5e-07	6.6e-05	23.3	4.1	1	23	232	254	232	254	0.98
5	16	4.8e-05	0.0037	17.8	3.5	1	23	259	281	259	281	0.97
6	16	0.00029	0.023	15.3	2.3	1	23	287	309	287	309	0.96
7	16	1.3e-05	0.001	19.6	0.5	2	23	316	337	315	337	0.97
8	16	0.00074	0.058	14.1	1.9	1	23	343	365	343	365	0.98
9	16	0.76	59	4.6	0.4	2	23	372	392	371	392	0.92
10	16	1.2e-05	0.00097	19.6	0.1	1	23	398	420	398	420	0.97
11	16	0.00045	0.035	14.7	1.6	5	23	429	447	428	447	0.95
12	16	1.8e-06	0.00014	22.3	0.4	2	23	454	475	453	475	0.97
13	16	1.1e-07	8.3e-06	26.1	0.2	1	23	481	503	481	503	0.98
14	16	9.2e-06	0.00071	20.1	1.8	1	23	509	531	509	531	0.98
15	16	7.6e-06	0.00059	20.3	3.0	1	23	537	559	537	559	0.98
16	16	0.0013	0.098	13.3	3.7	1	23	565	588	565	588	0.94

Sequence Information

Coding Sequence: atggaatttgaattttcctcgTGTAACGAAGAAATAGTAAAAGTGGAAGGAGAGCTCGCAGATGAACACGATGAGGATTGCTCCAACGAGGACgaacttgataattttatctTGACTTACGATACAAACGAAAGAGCCGAGGTTAAAGATGACGACGTAAACGAAAAtgaatcgtttgaaaataatcgcaACGACGGTTACACGGCGCAAAAGGACGAGCCATGCTACGAGGAAGTTGATTTATCGTATGCGGAATCGTCCTTCCTTCTgtgcattttttgtaataaaaattttgaacaagaaTTTGAACTAAAAGACCACATTAGCCGGCAGGTTTCGGAGTGTGGTAGCTGTAAGAAGTGGTTCTGTGATAAAGAATTGTACCACGATCACATCGAGTCGtgttataaaaaagaaatttccaatCGAGTCCGTTCGGCTGTGAATTCACTGGGTGATGATACTGCAACTTCGTCTTCGACCAATGATCAACAGATTTCTGAAGTAGTTCGTTCCGGTGTAAATTCGCCAGGCAAACGACAAAGCGCTAGAATTCCGGTCGTaaggaaaaaagttaaatttcgATCGAACGAggttactgaaaaaattttcgagtgtCACGACTgtggaaaaactttcaaggCTAAGAAAATCATAGAAGAACACGTCAAAATACACACCAATGAAAAGCCATTTACTTGCGCGCTATGTGGAAAGTCATTTCGGCAACGATCTCATTACAAAACGCATCAAAACGTACACTCGGCCGAAAAATACCAATGTTATCACTGCCAAAGGATTTACCGCGATAAAAGTCGTCTAAAAAGGCACATCTTGGCGCACCGAGACGGTAAGAAACACGCGTGTCAATACTGCGGCAAGAAATATCTGTTACGTTCGTCCTTGAAGGCACATATTCGTCGACATACCGGAGAAGGTATCATCGTTTGTACGCTTTGCGGTAAAGATTTCACATCCAAGTATAAAATGGAGGTACATTTGAAGATGCATACTTCGGAGAAGAAATTCACCTGCCAACTGTGCGACAAGAAATTCCTAAGCGCGTACACGTTGAAACAACACGTGTCCAGGCATAACGctgtgaaaaacaaaaaatgcgaCATTTGCGGCAACGACTACACCGAAGAATATTTTCCTACTCATCTGCGAACGCACACCGGAGAAAAACCTTTCGAGTGTACCGTCTGCGGTCGTCGTTTCGCTCAATATTCCGGTCTGTGGGAGCATCGAGCCATACACGAGGAATCGAAACGTTTTTATTGCGGCtgcggtaaatttttttctcgcagcAAAGAATTGAAACAACACGAAAAACAGCACACAGGGGACGGATTCGTATATTGTAATTATTGCGGAAAAGGCTTCGCCTCCAAGTGGCTGCTGCAGAATCACGAACGTAAACATACCGGAGAGCGACCGTTCGTATGTCCCATCTGCAACACAGGCTTCACCCAAAAAGCCAACTTATTCGCCCATCTACGCTCCCATACCGGAGAAAAGCCTTTCTCCTGCGACACTTGCGGCCATCGTTTCGTCAGCAAGGCTAAACTGAAAACTCATATAATGATACATACCGGCGAGAAACCGTTCGTGTGTACGTTCTGCGATAAAACATTCCGACAGATGAACTCGTTGCAATATCACCTCAAAACGCATACTCGTGAAAAACCATTCGAATGCGGCTGTTGCGATATGCGATTCAGCCGGAAAGCTTCGCTGAAACGGCATACCAGTAAAATGCACGTTCAGGAGTGTTACGAATGA
Protein Sequence: MEFEFSSCNEEIVKVEGELADEHDEDCSNEDELDNFILTYDTNERAEVKDDDVNENESFENNRNDGYTAQKDEPCYEEVDLSYAESSFLLCIFCNKNFEQEFELKDHISRQVSECGSCKKWFCDKELYHDHIESCYKKEISNRVRSAVNSLGDDTATSSSTNDQQISEVVRSGVNSPGKRQSARIPVVRKKVKFRSNEVTEKIFECHDCGKTFKAKKIIEEHVKIHTNEKPFTCALCGKSFRQRSHYKTHQNVHSAEKYQCYHCQRIYRDKSRLKRHILAHRDGKKHACQYCGKKYLLRSSLKAHIRRHTGEGIIVCTLCGKDFTSKYKMEVHLKMHTSEKKFTCQLCDKKFLSAYTLKQHVSRHNAVKNKKCDICGNDYTEEYFPTHLRTHTGEKPFECTVCGRRFAQYSGLWEHRAIHEESKRFYCGCGKFFSRSKELKQHEKQHTGDGFVYCNYCGKGFASKWLLQNHERKHTGERPFVCPICNTGFTQKANLFAHLRSHTGEKPFSCDTCGHRFVSKAKLKTHIMIHTGEKPFVCTFCDKTFRQMNSLQYHLKTHTREKPFECGCCDMRFSRKASLKRHTSKMHVQECYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -