Bdim012534.1
Basic Information
- Insect
- Balanococcus diminutus
- Gene Symbol
- -
- Assembly
- GCA_959613365.1
- Location
- OY390717.1:3307629-3359369[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 7.7e-05 0.006 17.2 4.4 1 23 270 292 270 292 0.98 2 28 0.00038 0.03 15.0 3.5 1 21 298 318 298 319 0.95 3 28 0.4 31 5.5 0.1 7 22 332 347 327 350 0.86 4 28 0.00049 0.038 14.6 1.3 2 23 379 400 378 400 0.94 5 28 5.6e-05 0.0044 17.6 1.3 1 23 406 428 406 428 0.98 6 28 1.3e-06 9.9e-05 22.8 2.9 1 23 434 457 434 457 0.96 7 28 0.023 1.8 9.3 4.0 1 23 468 490 468 490 0.94 8 28 3.7e-06 0.00028 21.3 0.7 1 23 495 518 495 518 0.97 9 28 0.053 4.1 8.2 3.5 1 23 533 555 533 555 0.96 10 28 8.1e-06 0.00063 20.2 1.7 1 23 560 583 560 583 0.97 11 28 0.0011 0.085 13.5 3.9 1 23 591 613 591 613 0.96 12 28 1.3e-05 0.001 19.6 2.3 1 23 619 642 619 642 0.95 13 28 7.8 6.1e+02 1.4 0.5 2 9 654 661 653 668 0.88 14 28 0.085 6.6 7.6 0.3 2 23 824 845 823 845 0.92 15 28 2.3e-05 0.0018 18.8 1.4 1 23 915 938 915 938 0.95 16 28 5.7 4.5e+02 1.8 7.0 1 10 946 955 946 959 0.95 17 28 0.12 9.1 7.1 5.1 1 23 995 1017 995 1017 0.94 18 28 2e-05 0.0016 19.0 1.3 1 23 1023 1045 1023 1045 0.98 19 28 2.8e-06 0.00022 21.7 0.6 1 23 1051 1074 1051 1074 0.97 20 28 0.11 8.6 7.2 2.0 1 19 1084 1102 1084 1103 0.96 21 28 3.7e-06 0.00028 21.3 1.1 2 23 1141 1162 1140 1162 0.95 22 28 8.9e-05 0.0069 17.0 1.3 1 23 1168 1190 1168 1190 0.98 23 28 1.9e-05 0.0015 19.0 0.5 1 23 1196 1219 1196 1219 0.96 24 28 0.078 6 7.7 0.6 1 19 1230 1248 1230 1251 0.93 25 28 0.22 17 6.3 4.1 1 23 1272 1294 1272 1294 0.92 26 28 0.049 3.8 8.3 1.2 1 23 1300 1322 1300 1322 0.94 27 28 0.00014 0.011 16.3 1.6 1 23 1328 1351 1328 1351 0.94 28 28 6.1e-05 0.0048 17.5 2.5 1 23 1386 1409 1386 1409 0.97
Sequence Information
- Coding Sequence
- ATGGAAGAGAGAttcaaaagCGACGTTCTAAAAGACGTCAAGGCGGTGATAAAAGACAGCATAGGCAGCCACGAAACACCTACATCGATTtcgaagatatttgaaaaaTTCAAAAATGAAGTCTTAAAAGACGTCAAGGCTttgataaaagaatttttggataCGTCGATGCAGATTCCATCCACCAGCGATGTAAATTCCACTCGTTTATCGCATACAGACAACGATCGACATTCTACTGTACTGGACGGtTCGAATTCGTCGAGTGAAAAACGTAAAATCCACGACAGGGAACATCGAGATGGTGGACCttctaaaaagaaatcagCTTCGTTACCTCCGACAACGCCTCTTCCATCGCCGGAAAAAGTGATCGATATTAGAAACGATTTATTCGTGTTGTCGAAAAACGGTTTCAAAGTGCAAATGCCACGAAATTCTTCGTCGACTGTACAACTGGTCGTGACGAAATCTACCAGATGTCCTATTTTACTAGAAGataccaaaataaatttgctGTCGGGAAGTGCTTCGATCGACTGCTGCATTACTCGAGCCAGTTCGCCGTTCGGTGCTAAAGCTTCGACGCTCGTTTTAAAAGAGCATTTGATTCATCACGACATTTATGAATCCAGTGTAAACCTCCTAAGACGTAGTTTTACGAACGACGCTAAAGAATCGGAAGGCTCTGAACGTTCGGAGGATATTTCCGCTTCTGAGACGATGAAGACGAAGACGAGTGCCGTTGAAGAACGTTCTAcagAAGACCCGACTCCGTCGTTTTCGCAAACGTCGTCTTCACATTCTTTTCGGTGCGAATTATGCGGTAAACAGTTTAAATTGAAATCCCATTTGAATGTCCACAAATTCACTCACAACGGCGAGAAGCCATTCAAGTGCGGCACTTgcggaaaatgtttcaaccAACGGAGCAATAAACGCACGCACGAGCGTTTGCAAAAACCCGGCGATTGGCTCAAATGCTCGATGAGTGATCGCGAATTTAGCGAAAACGGAAATTTAAAGAAGCATATTATGATATTGTGGCATAGAGACAAAAAGGCTGAACACAAACCTCGCTTCAAATACAATCCGGCTCCATCGTCTGGGCAAACGCCATCTTCCCACTCTCTTCGGTGCGTATTATGCGGTAAACAGTTTAAACGGAAACGAAACCTGGACATTCACAAATTCATTCACAACGGCGAGAAACCATTCAAGTGCGGCACTTGCGGAAAACGGTTCAGCGGTCCGAGCAGTAAACGGCGACACGAGCGTTTGCATAAACCCGGAGATTGGTTCGAATGCGCCAAGTGTGGCCGTGATTTCAgtcaaaaacataatttaaagAAGCATATGATGTTGCAGCATAGAGACAAAAAGGCTGAAAACCAACCTCGCTTCAAATGTGACATTTGCGGGAAACGATTCTTCCATTTAAGGACTAAAAACGAACACAAGCTTTTGCACGACGATCGAGGCTTCGAATGTGCGACGTGTGGCCGAAAGTTCGCCCAAAAATATCTTTTGAGGAGACATATTATTCGCATGCATCTGCGACCGCGTACACAAGAAAAGCCTTCGAACAAACCTGGCTTCAAATGTGAAATTTGTGATAAACGTTTCCTCCATTTAAGTTATAAAAATGCACACGAGCGTTTTCACGATGGTCAAGGCTACGAATGCGCGACTTGCGGTCGTAAATTCACTGTAAAGCACAATTTAAGGGAACATATCATGCGGATGCATGGAGACAAGAAGAAACTTCGCTTCGTATGTGGAATTTGCGGCAGGCGTTTCTCGCATTCGCACAGTAAACGCAGACACGAGCTTTTACACGACTCTCAAGATCAGTTCAAATGCACCACCTGCGACcgaagtttttacaaaaaaggcTATTTGAAGAGACATATTGAGCAAATCCATAAAGATGAGAAACCCGACAAGAAAGTtgatttaaaatgtaaaacatGCGGCAAACGGAAGCGGAAATCCACATCTATGGCTAAGATTAATGCGAACATTGCGGCTGTGATCGctgaaatattggaaaaaTACCGAAATCAAATTGTGAAAGAAGTCAACGCGTTAATAATCGATATTTTAGATACGTTTGTACAGACTCCGACCACCAGCGATGGGAAAACATCGAATCAAGACAGatccgTGGGTGGTGGTTCGTCGAAGACTAAATCGAGCTCGTCATTCCTGAAAACGGCCATGGCTTCTGCTGGCATTGGCACTCATACAGATCCGAACTCTGACTTTGATCCTACAAAACGCAAAGTTCAACGAAAACGAAGCAAGTCATCTTCGAGGGATACTTCTGCTGTAGAAAAACACGCCGATGAGACTGTTACAACTGAAACTCCGGACGGCCCTTCGGAAGGTCGAACGAAAATAACACCACGTACAGCTTCGAAATCACCAGCTGGGGAACTTGCCACTGGGTCATCCTCATCCTCGCTGCAGTGCGAATTATGCgacgaaaaattatcttccaGATGGGACTTGATGTACCACAAATTTGCTCACAACAAGTGCAACGCCAACGGCGAGAAACCACTCGAATGTGGCATTTCGGGCAAACGTTACTCCACTCGGAGCATAAATAAAAACAGCCTCGAACCTCTGCCCTCCACTCGGAGCAATAATAAAAGCAGCCTCGAGCCTCTGCCCTCGACTCGGAGCAATAATAAAAGCAGCCTCGAGCCTCCGCCTAGTCCCAAAAATCAGGTCGACTTCGAATGCGCGACGTGTGGACGTAAGTTCGGCACAAAACACTCCTTGAAGAGGCATATTATACTGTTGCACTTGGAAAAGAAGACAGCTCGCTTCAAATGTAAAACTTGCGGCAAATGTTTCCCATGTCTGAGTATTAAACGCCTTCACGAGCGTTTGCATACCGCTGATATTGAGTTTCAGTTCAAATGCCCAACTTGTGCCCaaCGCTCTACAGACTTATCGCTGCAGACTACCCCCTTCAAATGCGAAATATGCAATAAACAATACAAGTATAAATGCGACTTGAAGTTCCACGAATTAAGTCACAACGGCGCGAAACTATTCCAATGTGGCGTCTGCGGGAAAAGTTTCAACCATCCGGCCAATAAACGCAATCACGAACGTTTGCACGACCCGAACGGGCGGTTCGAATGCGGAAAGTGTGGCCGCGCGTACACCCAGAAAGGCAACTTGAAGTATCACATTATGAAAATGCACGGAGACGAAAAGCAAAAGATGCCTCGTTTCAGATGCGAATTTTGCGGCAATCGGTATTTTCAGAATAGATCGTATAAAAGACATGTTCCCAAGTGTGAGAAACGCGATATCCTCCTCCTTCTCGACCAAGAGGCAAGAACGCAGAGATCCGAACATCCAGCTGTGCCATCATCACACGTGGGCTCCTCTTCCTCCTCTCGGTGCGACATATGCGATAAGACGTTCACCCACCCAGGCGACTTGAACCGCCACAAATTAGGCCACACCGGCACCAAACCGTTCGAATGTCGAATTTGCCTGAAACGTTTCAACCGTCCAGACAGCGTGACCAGACACAGGCGTTTGCATAACCCCGGCGATCAGTTCGAATGCGCGATTTGCGGTCGAAAGTCCACCCGAAAGGACGACTTGAGGAACCACATTATGCAAAAGCATTTGGGAGACGAGCGTTTTGGGAAATCTCCCTTCAAATGTGACGTCTGCAGCAAACGATTTCTCTACAAAAGGGCCTTCGAGAAGCATGCTGCGTCGTGTAATGATAATGAAGaacaTCCGGCTGTGCGATCCTCGAAGAAATCTTCCTCTCTCTCCTTCCGATGCGATATATGCGATAAAATATTCGGCTGTAAAAAACGATTGAGACGCCACAAATTCGCTCACAAAGGCGATAGACCATTCGAGTGTCGCTTTTGCGGCCAGCGTTTCAACCGTTCGGATGTTAGAGGCAGACACGAGCGTTTGCACGACCCGGAGGAGCGATTCGAATGCGCGACATGCGGTCATAAATTCGGCCAAAGATATAACTTGGAGAAGCACATTACGCAGTTGCATATGACAGAGAAAACGACTGAGAGGAAGCCTGCCATCAAATCCAGATTTGGGTTTGTTAATAGTGTACCCAGGCGCGAGAGTTCGCACGACTCCGACGGTGAGTTCGAATGCGCGACTTGTGGTCGTAAGTTCGATCGAAAAATCTACTTGAAGAAGCATACAAAGCGGTCGCACGGAGACGGAAATTCCTCCGGCGAACGTCGCTTCGAATGTGAAAGTTGCGGAAAATGGTATcagtggaaaaaatgtttcgaaaaaCATGTCGCATCGTGTGATGGACGACGCCGCCGTAAGAGAACCGATTGGTCTGCAAGTTTCCTCTCTCAAGCTGTGTTACCGCCTAAACCTACGTATGACTCGTCACAATATAGTATTTACGCAATGCCTGACATGCCTGACATGCCTGACATGTAA
- Protein Sequence
- MEERFKSDVLKDVKAVIKDSIGSHETPTSISKIFEKFKNEVLKDVKALIKEFLDTSMQIPSTSDVNSTRLSHTDNDRHSTVLDGSNSSSEKRKIHDREHRDGGPSKKKSASLPPTTPLPSPEKVIDIRNDLFVLSKNGFKVQMPRNSSSTVQLVVTKSTRCPILLEDTKINLLSGSASIDCCITRASSPFGAKASTLVLKEHLIHHDIYESSVNLLRRSFTNDAKESEGSERSEDISASETMKTKTSAVEERSTEDPTPSFSQTSSSHSFRCELCGKQFKLKSHLNVHKFTHNGEKPFKCGTCGKCFNQRSNKRTHERLQKPGDWLKCSMSDREFSENGNLKKHIMILWHRDKKAEHKPRFKYNPAPSSGQTPSSHSLRCVLCGKQFKRKRNLDIHKFIHNGEKPFKCGTCGKRFSGPSSKRRHERLHKPGDWFECAKCGRDFSQKHNLKKHMMLQHRDKKAENQPRFKCDICGKRFFHLRTKNEHKLLHDDRGFECATCGRKFAQKYLLRRHIIRMHLRPRTQEKPSNKPGFKCEICDKRFLHLSYKNAHERFHDGQGYECATCGRKFTVKHNLREHIMRMHGDKKKLRFVCGICGRRFSHSHSKRRHELLHDSQDQFKCTTCDRSFYKKGYLKRHIEQIHKDEKPDKKVDLKCKTCGKRKRKSTSMAKINANIAAVIAEILEKYRNQIVKEVNALIIDILDTFVQTPTTSDGKTSNQDRSVGGGSSKTKSSSSFLKTAMASAGIGTHTDPNSDFDPTKRKVQRKRSKSSSRDTSAVEKHADETVTTETPDGPSEGRTKITPRTASKSPAGELATGSSSSSLQCELCDEKLSSRWDLMYHKFAHNKCNANGEKPLECGISGKRYSTRSINKNSLEPLPSTRSNNKSSLEPLPSTRSNNKSSLEPPPSPKNQVDFECATCGRKFGTKHSLKRHIILLHLEKKTARFKCKTCGKCFPCLSIKRLHERLHTADIEFQFKCPTCAQRSTDLSLQTTPFKCEICNKQYKYKCDLKFHELSHNGAKLFQCGVCGKSFNHPANKRNHERLHDPNGRFECGKCGRAYTQKGNLKYHIMKMHGDEKQKMPRFRCEFCGNRYFQNRSYKRHVPKCEKRDILLLLDQEARTQRSEHPAVPSSHVGSSSSSRCDICDKTFTHPGDLNRHKLGHTGTKPFECRICLKRFNRPDSVTRHRRLHNPGDQFECAICGRKSTRKDDLRNHIMQKHLGDERFGKSPFKCDVCSKRFLYKRAFEKHAASCNDNEEHPAVRSSKKSSSLSFRCDICDKIFGCKKRLRRHKFAHKGDRPFECRFCGQRFNRSDVRGRHERLHDPEERFECATCGHKFGQRYNLEKHITQLHMTEKTTERKPAIKSRFGFVNSVPRRESSHDSDGEFECATCGRKFDRKIYLKKHTKRSHGDGNSSGERRFECESCGKWYQWKKCFEKHVASCDGRRRRKRTDWSASFLSQAVLPPKPTYDSSQYSIYAMPDMPDMPDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -