Bdim001707.1
Basic Information
- Insect
- Balanococcus diminutus
- Gene Symbol
- -
- Assembly
- GCA_959613365.1
- Location
- OY390714.1:27826253-27837056[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 2 1.6e+02 3.3 0.2 1 23 269 292 269 292 0.86 2 31 3.6e-05 0.0028 18.2 1.7 1 23 295 317 295 317 0.97 3 31 1.7e-05 0.0013 19.2 2.6 1 23 323 346 323 346 0.97 4 31 0.22 17 6.3 1.5 1 23 355 377 355 377 0.95 5 31 2.7e-05 0.0021 18.6 1.6 1 23 383 405 383 405 0.97 6 31 0.0066 0.51 11.1 10.2 1 23 411 434 411 434 0.98 7 31 2.4e-07 1.9e-05 25.0 1.0 1 23 440 462 440 462 0.98 8 31 0.0045 0.35 11.6 0.1 2 23 469 490 468 490 0.97 9 31 4.9e-06 0.00038 20.9 0.1 1 23 496 518 496 518 0.97 10 31 0.27 21 6.0 0.1 1 23 564 587 564 587 0.96 11 31 0.0005 0.039 14.6 3.5 1 23 590 612 590 612 0.97 12 31 0.0028 0.22 12.2 1.0 1 23 618 641 618 641 0.96 13 31 0.0056 0.43 11.3 0.6 1 23 649 671 649 671 0.97 14 31 6.9e-06 0.00054 20.5 0.5 1 23 677 699 677 699 0.97 15 31 0.00013 0.0098 16.5 1.7 1 23 705 728 705 728 0.97 16 31 4.4e-05 0.0034 17.9 1.9 1 23 734 756 734 756 0.98 17 31 1.2e-05 0.00094 19.7 0.2 2 23 764 785 763 785 0.97 18 31 0.00018 0.014 16.0 0.6 1 23 791 813 791 813 0.95 19 31 8.1e-05 0.0063 17.1 0.5 1 23 819 841 819 841 0.98 20 31 0.16 12 6.7 0.5 1 15 848 862 848 862 0.91 21 31 0.0032 0.25 12.1 2.8 1 23 886 909 886 909 0.96 22 31 1.6e-07 1.2e-05 25.6 1.3 1 23 912 934 912 934 0.99 23 31 0.00045 0.035 14.7 1.1 2 23 941 963 940 963 0.97 24 31 0.048 3.7 8.4 0.3 2 23 973 994 972 994 0.97 25 31 4.7e-05 0.0036 17.8 2.8 1 23 1000 1022 1000 1022 0.97 26 31 1.2e-05 0.0009 19.7 0.6 1 20 1028 1047 1028 1048 0.96 27 31 5.1e-06 0.00039 20.9 2.6 1 23 1057 1079 1057 1079 0.98 28 31 6.5e-05 0.005 17.4 2.0 1 23 1086 1108 1086 1108 0.98 29 31 7.3e-05 0.0056 17.2 1.6 1 23 1114 1136 1114 1136 0.95 30 31 0.00013 0.0099 16.5 0.8 1 23 1142 1164 1142 1164 0.98 31 31 0.003 0.23 12.2 6.7 2 23 1172 1193 1171 1194 0.95
Sequence Information
- Coding Sequence
- atgaatattacTGCTTCTTTTACAACACTCTGTCGTCTATGCTTAGAACCGGAGCAAGCTAGTATTCCaatatttaaagaaaacgAAACCGGCGTTTGCGAattatttgacaaaatatcaGTTTGCCTTCCTGTAAAACTTTCAGAAGATGACTGTCTACCGAAGAACATTTGTAGCACTTGCTGTAAAAGTGTGGATtttatttacaacttttggcAAATATCGTCAAATTCGGAGAAACAGCTGAAAAGCATGGTAGAAACTGTCGATCAAACTAAGACCGAATATGATGTACAAGAATGTGCTGCTGACGCTAGTCCTGAAAACACTCTGATTTTGTACGAAACGTTGGAAGATAGAGATGTTATCGAAGAAAGAGACGACGAAGAAGTGCCAGATGCGAGTAATATCGAAATCAAAGAAGTATATTTTGGCGAATACTTGAATCAGTGTGATACCATCGAGGATGAAAACACTGTCCTGATCAACGAAGATTCGCCTCAAATGAAATCAGACGCGTTAGCAAATGAAATTCTCTTATCGAACGTTGGTGGCGATGCAACGGCTCAGTCCAGTAATGTCGAAGATATTCAGATTAGTCAGATTGTTGAAAGTAGCAACGTTTCATTGAGGACTTTTGACGAAGAAAACTCACTTAAGCTGAAGTTGTGGGATGTCGCGttacctgatttttttctaataccaTACGGTTACGAAGCTGAAACACACTCAGTAGATCCAAATGCGGTTGTTCTGATGGATTTACAAAAATCGACCATCGTTGTACCTGAAAAAAGTCACGCATTCGCCTGCGATATTTGCGAATCCACATTTAATGAACAGTTACCGTATTTGAAACACTACGAAGAAATGCACAAACAGTTTAAGTGTCCGTTTTGCGAGAAATCATTTATTCGCCGGTATAGGCTGGAGAATCATCTGTTTGTACATAGCTCTCGGCGTGATTTTCCTTGCACATTGTGTTCGATGAAATTTAAACGTAAATACGATCTTAAGCAGCATATTAAGCGGATGCACGATAGATTAGTTGAAGTGCAAATTTTCGAATGCGATAATTGCGCTTACAAAACGAagcataaaaatcaaatgagaATTCACGCTCTCGGTCATTTAGGCATCTCTTTATTCAGTTGCGATTTGTGCggcaaaactttcaaaacaaatttggaTTTTACCGTCCATCGTAACAATCATTTAGGCATAAAGCCGTTCCAATGCGATGTTTGTGGCAATCATTTTACACGAAAGCATCACATGCTACATCATCGTAAAACGATGCACGAAGAATTGTATTCTTTTCAGTGCGACATATGTGGACGTAGTTTTTCGTACAGATCCAGTTTGAGTATACATTTAAAATCGCACACAGGCGAAAATAAAGTGCAATGCGATATATGCAATAAAATAGTCAGCAGTAAAGTGGTCTTGgctaatcataaaaaaattcattccgaTGAGAAAGAATTTGTCTGCGGAATTTGCGGCAAAGTTTACATCAATAAATACTCATTACAGGAACACGTTCTCGTCCATACTGGAAGTAAACCGTTCCAATGTCTGCAATGTGATAAggaatgGATGTCAAAGAATGAAGACACTGATATGTCAGCGGAAAAATTTCTGGATATGATATTAGTTAAAGCCGAACCGAAACCGGATAGCAATCCGTACTCGTGCGTTATTTGCGGAGAAGATTGCTTAAACGAGGACAAACTAATCGAACATGCTCGAGTTCAGCATAAATCTCATAAATGTCcattttgcaacaaaatcTTCGCCCATAAATACGTTCTAGAGAATCACTTGTTTGTCCATACAGATAAACGAAAGCATCCATGTTCCCAATGTGCGCTATCATTCAAACGTGAAGTCGATCTACTGAATCATGTGAAGCGAACTCACGCTCGGACCGAAGTTGTGCTATATCGATGCGATAAATGCGACTATACTTCTAAAAATCGTTTCGGCATCAAAGTACATATCCTAGCTCACGATGGCATTTCCATATACAGTTGCGACGAATGCGGCAAAGGATTCAACTCGAAAGCCGGACTAAGGACGCATAAAAATAATCACCTTGGAATTAAACCGTTCCAATGCGACATTTGTGGCAACTGTTTCACTCGAGGACCGTATCTAAAACAACATCGTCAAATGGTGCACGAAAATCCTAATTCGTTCAAATGCGACATTTGTTACAGAGGATTTTCGTTGAAATCCacgctgaaaaatcatttgaaactGCACACCGGCGAAAATAAAAGTCTCACTTGCGATATGTGTGGAAAAACCGTATCCAGTAGGAATGCCCTTATAAATCACCAAAGGATACATAACAGAGATAAACGATTTTCTTGCAATGTCTGCGGCAAATCTTACGTTACCAAATTACAAGTGAAGAGGCATGCCTACATACATACCGGCGAAAAACCATTTTCTTGTAATATTTGTCAAAAGAAGCTAGCCACCGGAAGCAGTCTCGTTCAGCATATGCAAACGCATTGGGAAAATCGTACCTCGTATTCTTGCAATATTTGCAACAAGCAATACATCTCTAAGGAGAACAAACCACAGACGAAGGCTTCGAATGATATTGATATTTCTGAAAACGAACTTGAGGATTTTAAGAACTCCTTCAACTGCCACTTGTGCTACAAAGTCTTTCAAAAAGAAGACCAACTAAACGAGCATTTGACGAAAATGCACCGATGCTTCAAATGCCCTCTTTGTCAGAAAAGCTTCGGCAGAGCTGCGAATTTACGACACCATATGAACGTTCATACCGAATTTAAGAAcgtgaaatgtgaaaaatgtgGATCGTTTTTCAAATCGATGAGTGATGTGAAGTCGCATATGAAACGTGTACACGTCGATCCGAAAACgttaatatttaataaatgTGCGCAATGCGAGTACCAGACACCTTACGTTAGTCGGCTAAATAGACACATGATGGTGCATTCGGGTACGTATTTGCATTACTGCGAAGAATGCGGCAAAGGATTCAATCATTCGTTGGATTTACGAACTCACATCAATAATCATAAAGGACTGAAACCTTACCAATGTGAAATTTGCGGAAAGAATTTTAATCGCGAGTCGTACATGAAAAGGCATCGTGATTGTGTTCACGTTCAACCGCATTCGTTCGAGTGTGCTTATtgtcaaaaaagattttcattcaaatattCCCTAAAGTCTCATATCAAAGTTCATCTCGGACTGGTCACCTCTTACCGCTGTGATCGTTGCGATAAACGGTTATCTACTAGAATGTCTTTGCGTAATCATCTTCGATTGCATACCGATGAAAAACCTTTCCAGTGCGAGCTTTGTGATAAACGATACACCACCAATGGTGAATTGAAGTCGCATTCGTTTAGTCATGTCGAAGAAAAACCGTATAAATGCGAAAATTGCGCGAAAACATTTAGAGCAGcgtttatgttgaaaaatcacatgaCTATACATGAGCAATGTAGAGAACAGATTAAATGTgcattttgtgagaaaaaatattataggaATCATTCCTTGAAGAAACACCTTCAAAAACATCATATTAAACTTGACTAA
- Protein Sequence
- MNITASFTTLCRLCLEPEQASIPIFKENETGVCELFDKISVCLPVKLSEDDCLPKNICSTCCKSVDFIYNFWQISSNSEKQLKSMVETVDQTKTEYDVQECAADASPENTLILYETLEDRDVIEERDDEEVPDASNIEIKEVYFGEYLNQCDTIEDENTVLINEDSPQMKSDALANEILLSNVGGDATAQSSNVEDIQISQIVESSNVSLRTFDEENSLKLKLWDVALPDFFLIPYGYEAETHSVDPNAVVLMDLQKSTIVVPEKSHAFACDICESTFNEQLPYLKHYEEMHKQFKCPFCEKSFIRRYRLENHLFVHSSRRDFPCTLCSMKFKRKYDLKQHIKRMHDRLVEVQIFECDNCAYKTKHKNQMRIHALGHLGISLFSCDLCGKTFKTNLDFTVHRNNHLGIKPFQCDVCGNHFTRKHHMLHHRKTMHEELYSFQCDICGRSFSYRSSLSIHLKSHTGENKVQCDICNKIVSSKVVLANHKKIHSDEKEFVCGICGKVYINKYSLQEHVLVHTGSKPFQCLQCDKEWMSKNEDTDMSAEKFLDMILVKAEPKPDSNPYSCVICGEDCLNEDKLIEHARVQHKSHKCPFCNKIFAHKYVLENHLFVHTDKRKHPCSQCALSFKREVDLLNHVKRTHARTEVVLYRCDKCDYTSKNRFGIKVHILAHDGISIYSCDECGKGFNSKAGLRTHKNNHLGIKPFQCDICGNCFTRGPYLKQHRQMVHENPNSFKCDICYRGFSLKSTLKNHLKLHTGENKSLTCDMCGKTVSSRNALINHQRIHNRDKRFSCNVCGKSYVTKLQVKRHAYIHTGEKPFSCNICQKKLATGSSLVQHMQTHWENRTSYSCNICNKQYISKENKPQTKASNDIDISENELEDFKNSFNCHLCYKVFQKEDQLNEHLTKMHRCFKCPLCQKSFGRAANLRHHMNVHTEFKNVKCEKCGSFFKSMSDVKSHMKRVHVDPKTLIFNKCAQCEYQTPYVSRLNRHMMVHSGTYLHYCEECGKGFNHSLDLRTHINNHKGLKPYQCEICGKNFNRESYMKRHRDCVHVQPHSFECAYCQKRFSFKYSLKSHIKVHLGLVTSYRCDRCDKRLSTRMSLRNHLRLHTDEKPFQCELCDKRYTTNGELKSHSFSHVEEKPYKCENCAKTFRAAFMLKNHMTIHEQCREQIKCAFCEKKYYRNHSLKKHLQKHHIKLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -