Basic Information

Gene Symbol
crm
Assembly
GCA_959613365.1
Location
OY390716.1:41874873-41880697[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-07 0.00022 21.4 0.1 4 35 90 121 87 127 0.91
2 2 4.3 4.6e+03 -2.0 0.0 22 30 143 151 136 155 0.86

Sequence Information

Coding Sequence
atgACAGCAGTTACTGAAAAACTCGGCAGTTTCAATATCGAGAACGAAGCCAAGCCAGAAGAAGAAGTATTGGGATCAGTTACTCACGAAACACTCTCTACAGAACGTCCCATTCAATTGAGGACGAGTGCTCgtgtatcgaaaaaattacgccTCGATTTGCAAACGAACGCTGCCTCTGCACCTGTGgtcgaaaaaaaagAAACAAAACCCGAAGAAAAGGCCACCGAACAGAAATCCAATACTGTTCGTCGAGTTCACGAATTATGGTCGACCGAAGACAAAAATGCATTCTTCGAAGCACTCAACGAGTATGGTAAAGATTTCGATGCCATTCAGACGCACATGAATAATAAAAGAAAGAAACGAGGGATTAATCATAGTATCTCGAAGAACAGAGATCAAGCTAGACATTTCTACTACAGGACTTGGCATAAGATATCGAAATATTTGGAATTTCCTCAAGAGGTTAAAAAAGCAGTACGCGAGCAATACggattgatcaattttggagaatttaggaaaaaagttGGATTCGTTTCGGAGAAGAATTCCGTCAAATTGAACGAATTAATTTATAGTGGCAGTACACAGGTTCGAATTAAGGGTAAGACGCTCCGTATCAAAACTCCTGTTTGCAGAGCCCTCAGAAAATTGAACCAGTTGCAAGaaaCAACCGCCGATGTTAAACTTCCTACTAGAATTAGTATCGAATTACGTCCACGTAACAAAGAATCATGGTGTCGTGTTCAATCATTGGCTATGAATCCGAGAGTGCGAACTACTCTACCGCTGCATCAACAGCTAATCTCCCTGATAacatgtttacaaaaaaaatggcaatcgCCTGATGCTAaattgAAGGAAAAATCCACACCACATAATGCAGACCCCAAATCAGAACCTATCGATAGTGACACTCCATTACTAAGAATAGCACCGAAACAAGGAATAAACATTGTAGCACCTTCGGTTCGTAGCGGAGAATTCGTAACGAGCTCTCGTATCAGTCTACTCGCGTACGAGGAAAAATTTGGCATCGAAGGACAAGCAATCTCTGAAAGTCTGAAACAATTACAGACCGCTAATAAAAATAGCAAATCGAGTCGTAacgtaaaaaaacaacacgtcgaagatgaaaaatcaaaagccAAAGAAGAAATCGATACTCAGTCACAAAGTGTTCTCCAAGCAGATAAACCATTATCAGATAAAGATTTCGTATCCTCGACTGTAAATCAACTTCTGTCGTTGAACAATCCTGCGGCCAAAGATGGAGCCGATGAAAACGAGTGGAACAGTCCGGTAAAAGACGATTTCGAACTCGACAATGAAATATCAGCTTCGGAAAATAAGGAAGAAATAATCGAGAGAGCGAAAGCTGGTTGGAATATTAAAAATGCCGAAGCCATCAGAATTGGAGATTTATACCTAATGTTCGGCATCGATTCCAAGCTACAATTGGATTATTGGTGGGAAGATCCGGTTCTCGATAAAGAAGCCAAAACCAGCGAATCCGTTGCCGAATCTTCTAATacagaagagaaaaataaactttccgAGTCTCTCCGAAAACTTTTATCAATCGCGAAACTATATTTAACGAAAGATAagaGTCAATGCACTTGTGGTCACATTTGCAaacctaataataaaattgcaaatggTCGTACGAGAGTTGTGaacaaaccaaaaattactaCAAATAATAACGTAAACGAAACACACTTTAACTCGAGTACCTCGGAAAGCGACCGATTATTAAATGTATCCGCCGAATCGACGTCCAAAAATCATATTACCAATGTTACCGTCAACAGGCTTCATTCCAATTATGTTCCTTCCAGAACAATCAGTTCATTCAAGGAACAACTCGAcTTGCAGTATTACAATCGGCGAAGGAGTGGTGATAAACAACGCTCGTTACCGTCCATACCTAAAGTAACCATACAAGTCATTAAACCCAAAGAAGGCGATCGAGCGGAAGTTAGAGAAGAAAAGAATGATACGGAAGTTGAAAAAGATCACAGCGCAGAAATCACTTCCAGACTCAATATGAATAACACGATTGATAATAACTCTGTTTTTAATCAGTTACCTTTGTTTCCAGACAACCTTAGCGGTAAAgatttattATTGCAAGATGAAGACGCCAAATCGAGTTGTTCGACTATtacgagatttttaaaacaagcTTTGCCGGAAGTTATTCCACAGCCTATAGATCCAAGTCCAGAtggCTTTACAACTCCTCTGATGTCGCATCGAATCGTGAGTGATGTAGATATGAATCAAAACAATAACGGCAGAGCTTCGCCGACATTATCAATGGCTTCGAGTTTTTCGATCGGTAGTTTATTAGCACAACTTGACAATCCTAAAACTTCGTCGAATCCACCTGTTCAACTCGATGAAGATACGAGATTCTCTACCGATgTTGAAACTCAATTTCAACGGTTGATCAATGAGAGCAGCGTCGATTATACCGAAAAATTTGCCAGCCTTGCAGCGCAAATGGCTTCTGAAAATAatcctaaaatttaa
Protein Sequence
MTAVTEKLGSFNIENEAKPEEEVLGSVTHETLSTERPIQLRTSARVSKKLRLDLQTNAASAPVVEKKETKPEEKATEQKSNTVRRVHELWSTEDKNAFFEALNEYGKDFDAIQTHMNNKRKKRGINHSISKNRDQARHFYYRTWHKISKYLEFPQEVKKAVREQYGLINFGEFRKKVGFVSEKNSVKLNELIYSGSTQVRIKGKTLRIKTPVCRALRKLNQLQETTADVKLPTRISIELRPRNKESWCRVQSLAMNPRVRTTLPLHQQLISLITCLQKKWQSPDAKLKEKSTPHNADPKSEPIDSDTPLLRIAPKQGINIVAPSVRSGEFVTSSRISLLAYEEKFGIEGQAISESLKQLQTANKNSKSSRNVKKQHVEDEKSKAKEEIDTQSQSVLQADKPLSDKDFVSSTVNQLLSLNNPAAKDGADENEWNSPVKDDFELDNEISASENKEEIIERAKAGWNIKNAEAIRIGDLYLMFGIDSKLQLDYWWEDPVLDKEAKTSESVAESSNTEEKNKLSESLRKLLSIAKLYLTKDKSQCTCGHICKPNNKIANGRTRVVNKPKITTNNNVNETHFNSSTSESDRLLNVSAESTSKNHITNVTVNRLHSNYVPSRTISSFKEQLDLQYYNRRRSGDKQRSLPSIPKVTIQVIKPKEGDRAEVREEKNDTEVEKDHSAEITSRLNMNNTIDNNSVFNQLPLFPDNLSGKDLLLQDEDAKSSCSTITRFLKQALPEVIPQPIDPSPDGFTTPLMSHRIVSDVDMNQNNNGRASPTLSMASSFSIGSLLAQLDNPKTSSNPPVQLDEDTRFSTDVETQFQRLINESSVDYTEKFASLAAQMASENNPKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01263306;
90% Identity
iTF_01490925;
80% Identity
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