Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_959613365.1
Location
OY390716.1:30177681-30179486[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.8 9.4e+03 -3.0 0.0 18 24 105 112 101 113 0.83
2 3 1.5e-06 0.0016 18.7 0.0 2 35 289 325 288 335 0.85
3 3 8.2e-13 8.8e-10 38.7 0.2 3 44 381 427 379 429 0.94

Sequence Information

Coding Sequence
ATGTTCCTAGagaaagcAGCTCTCATTTTCTTACTGCACAATTTCCTGTACATTCACGTACATTCGTGGAATAATGACGAATTGGAAGTTTTCGACGCCGTCGACGATGTCAAACAGAACTTCTACACGCTACTGAACGTTACTCAGgATGTTGATTTGATCGGTATTAAGAAAGCATTCCGTAAACTTTCCCTAGCTTTACATCCAGATAAGAATCCATCTCCGACAGCCGAACAAGATTTCAGACACATCGTCACAGCATACGAAATTCTGAAAAGTCCCGAAAAACGTCAGTACTATGATAAGTTCCTGGAACATGGCATGCCTGACTGGAGGCAAGCTGTGTATTACTATCGAAGAGTTCGTAAAATGGGACTGCAAGAAATGTGTTTAATCTTGACCGTCATTATTAGTATTGGACAGTATTTGGTCGCATGGGCAGCATacgttgaagaaaaatatacattgaaagaaTTGCTGAAATCTAAAGACaagaaagcgaaaaaaatgagaaaagggAAATCTGAAACTACATTTTCCGATGAATATATCGAATCAAATGTTAAGAAACCCAgTGTGCTTAATACATtaccttttcaaatttgttatgGCATCAAAGCGTTGAccatttttctcttcaagttTACAATTTCAACTATAAAAGATTGGCACAGAGAATCTAGCGTAAAAGTTCCAAAAGAACAACCTCGTCAAAGaaCTGAACCTcatcaaaaatccaattacgaaaaaccaaaaaggGTCGATTTCGTTCCCGAAGTAATAAGTTACGCTCCCGAAATACAACAAACTACGAATAAGAAACCCGACGAAGAAATTACCAAAAGCCCTCCAGTCATCAGTGGTGGTTTATGGACAGATGACGATATACTagacttgataaaattggtgaaaaaatatcccgCCGGAGAGTCTGAAAGATGGCAAAAAATAGCTTGCGCTATGAATAGAACTGTTCCTGAAGTTACTCATATGGCTAATAAAATCAAAGATAACGATTTCCGCTTGCCTGCTGAAACCGAAGAAGAAGTTGTAGACCCTGAacctaaaaaagtgaaaacccgAGGTGGTAAAATGGGAATCGTTGATGCCGAAGGTGAAGATGAAAATACGCAGAGTTCGAACTGGACTCAAACGCAGCAAAAAGCCTTCGAAGCTGCTCTCAATAAATATGGGAAAAAATCGGTGGACGAtcgttgggaaaaaatttccaattgtgTGCCGGGAAAAACCAAAGAAGACTGTATGCTTCGTTACAAAAAGATCGCATCGATGGTTAGACAAAGAAAGGTCGTCGACGAAGTTCAAGAGAACAGTTAA
Protein Sequence
MFLEKAALIFLLHNFLYIHVHSWNNDELEVFDAVDDVKQNFYTLLNVTQDVDLIGIKKAFRKLSLALHPDKNPSPTAEQDFRHIVTAYEILKSPEKRQYYDKFLEHGMPDWRQAVYYYRRVRKMGLQEMCLILTVIISIGQYLVAWAAYVEEKYTLKELLKSKDKKAKKMRKGKSETTFSDEYIESNVKKPSVLNTLPFQICYGIKALTIFLFKFTISTIKDWHRESSVKVPKEQPRQRTEPHQKSNYEKPKRVDFVPEVISYAPEIQQTTNKKPDEEITKSPPVISGGLWTDDDILDLIKLVKKYPAGESERWQKIACAMNRTVPEVTHMANKIKDNDFRLPAETEEEVVDPEPKKVKTRGGKMGIVDAEGEDENTQSSNWTQTQQKAFEAALNKYGKKSVDDRWEKISNCVPGKTKEDCMLRYKKIASMVRQRKVVDEVQENS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01263297;
90% Identity
iTF_01490916;
80% Identity
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