Basic Information

Insect: Balanococcus diminutus
Gene Symbol: bab2
Assembly: GCA_959613365.1
Location: OY390716.1:59518435-59524499[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.8e-11 1.3e-08 34.6 0.0 1 39 477 516 477 520 0.90

2 4 1.6e-11 1.1e-08 34.8 0.0 2 39 532 569 531 572 0.92

3 4 1e-18 7e-16 57.8 0.0 1 45 586 631 586 631 0.97

4 4 1.4e-16 9.5e-14 51.0 0.1 2 43 639 681 638 682 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.8e-11	1.3e-08	34.6	0.0	1	39	477	516	477	520	0.90
2	4	1.6e-11	1.1e-08	34.8	0.0	2	39	532	569	531	572	0.92
3	4	1e-18	7e-16	57.8	0.0	1	45	586	631	586	631	0.97
4	4	1.4e-16	9.5e-14	51.0	0.1	2	43	639	681	638	682	0.95

Sequence Information

Coding Sequence: ATGGCCAACATCGGACAGCACTACTGCTTACGATGGAATAATTACCAGTCGAACATGACGTCGGTGTTTTATCAACTGCTACGCACCGGAGCTTTCGTCGATGTCACGTTGACCtgcaatgaaaattctttaaaagctCATAAGGTCGTTTTATCAGCATGTTcttcgtattttcaaaaattactaacaGATAATCCGTGCAAACATCCGACCATAATACTGCCGCAGGAAGTTGGCtttaatgatttgaaattcatcataGACTTCGTATATCGTGGCGAAATCAACGTCTCAGAAGCCGAGCTACAATCTCTGCTCAAGACGGCCGATCACTTGAAAATCAAAGGCCTATGCGAAGTGCCCGAAGGCGAAGAAGACGACATGGACGAGACTGGCTGCTGCGAATCAGTGACCGATGTCAGCGTTCTAGGTGCCCACATGATGATGCTGCAGCAGGAGAAATCGTCGCCACAGAAACAGCACAAAATACTCACCAAATTAAAACCAGCTGTGCATAAATTCGCGGCCAATATCAAACGAAAGCACCTGCCGCAAGATTTGAATAACTCGCGGAAATATTATATCAAAGATACCAAGTCTGGCTCCGGAAGTCACCTGGAACAAGGCTCAGTCCAACTGATCCAAGCCAGTACCATAAATCCTAACGATATTCTAGATACGGCGAATAATACTCAACAATACCACAACATGCAACCGTCGAGCAATTGCATTACAGTAGCAACATCAACCGAAGAAGACGACAAATCCAAGTCAACGACCAACAACGTGCCAGTAGTGATATTAGATAATCGTCATCAGCAGCAAATGTCGGCGACAGTTCATTCTTCCTTGCATTACGTGCAGCAAACCAATCAGCAACAGCAACAGCAACGATGCCAGCAgaacgaaaaaatcatcatgacTAGTCCATCGCCCATGATGACCTCGTGTACCACCCTGACAACTTTACAGACTCAACAGTCCTTACTTCTAGATCAAAATGGACATCACCTTGGACCAACACCGTCCCAAATATCGAATGCTGAAGATAAACAAACCGATGTCGAGATGATATCGGAAGGACAGCCTGCGGGACCTACAGCAACTCCTGTACATTGCCATTCGATCGAAATGCAACATCATAGTCCCACTCATCGAGACATCGCtgTTGACACCTCCGGAATGCAAACAGACGATATGAAagttaaatttgaaacattgagGACCATGGATCAGACTTCAGATAGCATGGATACGATTGAGAATCATATGTCCGAACACagcATGAACGACGACGAGCATACAATGCAAACGATGATGATCACTCCAGAATTACTAGGACTAATACCATCAACTTCATCAGCACCTTCCTCCGAAGTCGGCAGCGATAACGGTAAAAATAACATGACATTGTCCAAAAAAGATTGGACTCAAGAAGATATGGATGCTGCATTAGATGCCCTCCGAAATCATCATATGAGTTTGACCAAAGCTTCTCTAACGTTCGGCATTCCATCGACAACTTTATGGCAAAGAGCTCATAGACTCGGTATAGATACTCCTAAAAAAGACGGTCCTTCTAAATCTTGGAACGAAGACGTCCTTAATGTAGCTTTGGATGCATTACGAACCGGATCTCTCAGCGCGAACAAAGCTAGTAAAGCTTACGGTATTCCAAGTAGCACTTTATACAAAATAGCAAGACGTGAAGGTATAAGATTGGCAGCACCATTCAACGCAGCTCCTACAGCTTGGACTCAAGACGACTTGGAAAGAGCCCTGGAAGCAATCAGAACTGGACAGACGACCGTTCAAAAGGCAGCTACCGAATACGGTATTCCTACTGGCACACTTTACGGTCGTTGTAAACGAGAGAAAATCGAATTATCTCGTAGCAATCCAACGCCTTGGTCTCAAGATGCCATGTCCGAAGCTTTGGAAGCAATCAGATTAGGCCAGATGAGCATTAATCAAGCTTCCATACATTACAATCTACCCTACTCTTCGTTATACGGTAGATTTAGACGAGGTAAATACGAAGCCGACCATCTGGATCACGAAGACGATAACACCTCCGGAGTCGTCGTAGATGTCCAGCCCGGCGGTagtcaacaacaacaacaacagcagcagcagcagcagatGGTCCAGCAGTCTCATGCTGGCGAAATGCAGCAACAATCCGAGCCAAGCTCGTCTCAAGCTCAGCAGCAATCGGCCATTCAACCGCAGATTATGCTGTTGCAATATCAACATACTCCGGCCACACATATCCAAATGTATCAACCGGCGGCGCCCAGTTGA
Protein Sequence: MANIGQHYCLRWNNYQSNMTSVFYQLLRTGAFVDVTLTCNENSLKAHKVVLSACSSYFQKLLTDNPCKHPTIILPQEVGFNDLKFIIDFVYRGEINVSEAELQSLLKTADHLKIKGLCEVPEGEEDDMDETGCCESVTDVSVLGAHMMMLQQEKSSPQKQHKILTKLKPAVHKFAANIKRKHLPQDLNNSRKYYIKDTKSGSGSHLEQGSVQLIQASTINPNDILDTANNTQQYHNMQPSSNCITVATSTEEDDKSKSTTNNVPVVILDNRHQQQMSATVHSSLHYVQQTNQQQQQQRCQQNEKIIMTSPSPMMTSCTTLTTLQTQQSLLLDQNGHHLGPTPSQISNAEDKQTDVEMISEGQPAGPTATPVHCHSIEMQHHSPTHRDIAVDTSGMQTDDMKVKFETLRTMDQTSDSMDTIENHMSEHSMNDDEHTMQTMMITPELLGLIPSTSSAPSSEVGSDNGKNNMTLSKKDWTQEDMDAALDALRNHHMSLTKASLTFGIPSTTLWQRAHRLGIDTPKKDGPSKSWNEDVLNVALDALRTGSLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWTQDDLERALEAIRTGQTTVQKAATEYGIPTGTLYGRCKREKIELSRSNPTPWSQDAMSEALEAIRLGQMSINQASIHYNLPYSSLYGRFRRGKYEADHLDHEDDNTSGVVVDVQPGGSQQQQQQQQQQQMVQQSHAGEMQQQSEPSSSQAQQQSAIQPQIMLLQYQHTPATHIQMYQPAAPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01262654;
90% Identity: iTF_00194509;
80% Identity: iTF_00194509;