Basic Information

Gene Symbol
Xbp1
Assembly
GCA_959613365.1
Location
OY390717.1:13505489-13506776[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-15 2.5e-12 46.8 20.6 2 65 61 124 60 124 0.96
2 2 0.02 18 5.6 3.0 34 50 114 130 112 136 0.69

Sequence Information

Coding Sequence
ATGGCATTAGATAGCCCTAGGAGGGCTGTCGTGATAAACTcgtataattcaaaattggtatgtTCGATACCAAGCCAACGGTTCACGCCTCTAATTACATACAATGACAACATACAAATTAAAACGGAATCATGTTCGCAAAAGAAAGGCAGAAAACGATCACTGGATCATCTATCGTACGAAGAAAAACTTCAACGGAAaaaattaaaaaacagagAAGCCGCTCAAACGTCACGAGATCGTAAGAAAGCACGAATGGACGAATTGGAGAAAACTCTCAAAGGCATAGAAAGAACTAATAAAGAATTGAGATCCGAGGTCAACACGCTGAGAttggaaaaagaagaaatgagaaaagaaAACGAAGAATTGAGAAAGGAAAACGAGAGTATCCACAGTTTACCCTCTGCCGCAGGGTCGCTCGAGTCATCCAGCTCATCTAATTTCACCAATAGCACTCCTTGTTTCCCTGAACTCGATAATCTCGATTTGTTTTGGGATCTCGACGGCGTTGAGCCTGATTTGTCTACACTGGACGAACTTGTACAAAAGCTATCGTCGTTGTCGGAGCAAGCCAGCACAGAAAGCACCACAACTACCCCAGAGCAAATGGTGGGGCAGACATCAGCACAGTTGGAATCCAGCATTACTAACGTACCTTTTGCCAATTACGACGACTTAATCGAACCCACCGACACTAAGAGTAGTACGATTATTCAAGACGCGTGGAAAATGACCTCACCTACCTCCAAATTTTCGTCCGTTCCCTCacctattttcgaaataaaagaaGAACAGCAGGAATTCGTTTTAGACGATATGATATCCGAAGAAATCGTCATCACGTCGgaagatcattttttaaacgaagcactctacgatgaaaaaatcactaccAAAAGTATTTGCAGCGATTTCGATATGGAAGATAGAAATTCCGACCAAGGCTACGAGTCGATCGATTCGCCTTCGAGCGATATTGATTCCACTTTACCCGAATTGTTTCCTGAACTATTGTAG
Protein Sequence
MALDSPRRAVVINSYNSKLVCSIPSQRFTPLITYNDNIQIKTESCSQKKGRKRSLDHLSYEEKLQRKKLKNREAAQTSRDRKKARMDELEKTLKGIERTNKELRSEVNTLRLEKEEMRKENEELRKENESIHSLPSAAGSLESSSSSNFTNSTPCFPELDNLDLFWDLDGVEPDLSTLDELVQKLSSLSEQASTESTTTTPEQMVGQTSAQLESSITNVPFANYDDLIEPTDTKSSTIIQDAWKMTSPTSKFSSVPSPIFEIKEEQQEFVLDDMISEEIVITSEDHFLNEALYDEKITTKSICSDFDMEDRNSDQGYESIDSPSSDIDSTLPELFPELL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01490724;
90% Identity
-
80% Identity
-