Btry012028.1
Basic Information
- Insect
- Bactrocera tryoni
- Gene Symbol
- PIGG
- Assembly
- GCA_016617805.2
- Location
- NC:28409579-28420643[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.11 6.8 7.0 4.1 2 23 855 877 854 877 0.92 2 8 0.0015 0.089 12.9 0.4 2 23 1378 1400 1377 1400 0.96 3 8 0.19 11 6.3 1.6 1 22 1407 1428 1407 1430 0.83 4 8 0.0049 0.29 11.3 0.2 3 23 1438 1458 1436 1458 0.96 5 8 0.0031 0.18 12.0 4.9 2 23 1465 1487 1464 1487 0.95 6 8 0.00019 0.011 15.8 1.3 1 23 1493 1515 1493 1515 0.98 7 8 0.00022 0.013 15.5 1.2 3 23 1523 1543 1522 1543 0.96 8 8 4.3e-05 0.0026 17.8 2.1 1 23 1549 1572 1549 1572 0.96
Sequence Information
- Coding Sequence
- ATGGAAAAATCAAGTACTATTAGATATTTTCTAATGTGGATGATAGTGACGTTTATTTTTGGCGCGTCAATTTTTCTAACTGGCTTCTTCCCCATAAACAATTATACATTAGATCGTGCAGTAGCTGAAGACAAACCAAAAGATTTAGATGGATTGagtttaacgcCGCCAACTCAAATTTACGCACAAACCATACTAATGCTGGTGGATGCTCTACGTTTCGATTTTGCCAGTCAAAATGGTATGGAGTTTTCTTACAACAACTCATGTAATCGTCTCAAATTGCGAGTGAATATTCCTACTGTTACCATGCCCCGGCTAAAAAGCTTAACAACCGGCaccatttcaaattttattgatatagTCCTAAACATTGGTCATGTTGAGCAGCTTGCAGACTCTTTAATACACCGCTTACAAGTACGTAATGAAATTACGGTTTTTGCCGGTGATCGTACTTGGATAAGTCTCTTTCCAAAACAATTTACACGTTTTACCGCTAACTCAGATTCATTTTATGTAAACGACTTTTATGAGGGTGACAAGAATGTGACAGAAGTACTGACCAAAGAATTGCAAAATGACGACTGGATGTTGCTGGTGCTTCATTATTTGGGCTTAGATCACATTGGTCATGTTGAAGGTAGTGATAGCTCTAAAATCCCGCTTAAGCTAAAAGAAATGGATGACGTTGTGCTAAAGCTCTACAAAGCAAAGCATTTTCACAAGCAGCTACTAATATTAACTGGTGACCACGGTATGCGAGATGGTGGAGGCCATGGTGGAAGTACAGCTGGTGAATTGTATGTGCCATTATTTGTTCTCAAAGAAAATTGCACTACAAAAGgcTCTAGTAAAACTAACGAGTATAATCAAATTGATGTGGCTCCCACATTAGCCATTCTGTGGTCCATGGAAATTCCACCAATGTCAATTGGCTGTTTAATACCCGAGCTCTTGCATGAATTTAACTTAGAGGAACAACTATATGCTTATTACTATAATGCTTTACATTTAATGCAAAAAGCTAACAACAAATTTGGTCAagattatgttaataataatgCATTCAGCAAATGGTTTACAACAGCGAAATCTGCGCATAAGCAATTCCTTTTAAAAAAgcgtaataataattttgaaaatgccTTTATTTTCGAGGACGCTAAAATACATTATATACGTTTGGCACGCGAAATTTCAAATCAGCTCTCCGATTCGTTAGTACAATTCGATTACGGGCTGATCACATTAGGACTTGCGCTAACCACAATTGTGGTGCTCAATGCGCTATTGGCTTTTTGCACGGCAACTAATCGCGTTTTTATCAAAGGCAAAGGCGCCTTACTGTCCCTATTAGCTTTCGCCGCATGCATAAATAAATGGTGTCATTATCATGGATATTTCACAACCACTGGCACAATGAGTACCGTTGTGATATTGCTGGCGATAATGGCTAGCGTTTATATGCTAataaatatagcgaatttattATTGCGACGAATGCAGACGAGCAATAATCTACATAACTCACTTCCGAAACAAATTTGGATGCTGCTAAGCTGTTTACTAATTCACACACTAACGCTGGCCTCCTCTTCATTCATCGAAAGCGAGAATAAAACTTGGCATTATCTTGGTGCTAGCGCTTTAATTTTGCTTTGTGTGCAAAGTTTTCAAAAAGACTtattgtcttcaaagctggaagcGTGTATCAATGGTGTAGCGCTGTATAAAGTTGTTTTGcgcaatttacaaaaattacagACATCCTTTCTGATAATTGGCGGGCTGGGTATTTTATACCGTTTAGACGGCGCGGCATCCTATCTAACGCAGGAAGCAACAAAAACATGGTTAAGTTGCATATTCGTTGCGGGTCTACTCCTTTATGTGCTGTGTTTGCGCAAGCATAAACTCGTGCAAACGCGTAAGGAGCTTGTGATCTATCTTACAGCTGCCATGCTGATCTATTGCTATCGCACTTCTAAGGGAGTGGTTTCCTCTGTGTTTGACACAAACTGTTGTACTAAAATTGTTTTGCCCATATTTTGGATGGTTGTCATTATTGCTGCCTGCATTTCAACTGTGATATTATATACCAAACGTCGTCTTAGTTACCAAATTCAACACACTTTGTTAACTGGTTGCTTTAAAATTCTTCTAACTTTACTGCTGACAATTTGCTTGCTGCTGCATAAACCGCAAAATGTTTGTCTAGTCGCTTATTTGATATACACACTCTCTTTATGTTATGAGTTGTGTGACAAATTCGAAAAGAACACACTTCGCACTTCCAACTACAAGTATTTGTCGAAGCTGCTGTGCACTATTCTCGTGGGCAATATGTTTTACTTCTACCAGGGTAATTCGAACAGTTTTGCCACCATCGATCTAAATCCAGGCTACATTGGTCAAACTTCATATAATCCAATAATTTATTTAATACAACATTCAATACGGCGTTGGTACGTGCATATAATGAGTAATGCTAATATTTTAGCGGAGCTTAAACCTTGTGGCTATATTTTGGCAACAAGGCAGTATAAGTACTTTGCATTAAAATGCATCcattgtgataaaaaatatGGTCACTGGTCAACGTTTttacaacatttgaaagaatttcatAATGAAATTGAAGATGAGGCGCATTGGCTTTTTGAATGCACTGAAGAAACATTGTCATCGACCTGTGAACAAAGTGAGGAATACCCTGTGGAGTGTCTGACCGAAGCCCTACCTGCAAACGAAAGGGAAGCTCCTACTAGCGCTTTTCTAATGGAAGGAAAAAATGATTGTGTCGATAATGATTTCGGAAATTTGTTTTCCGACAATAAAATGGACGAAGACTCCTTAGCGGAAGAGGCCGAAAATGTGCTCTCAAATAGAGAGGACTCGCCATCCCCAACTAATCGGTTTTTAAACGAAACCTTTGAAGATTCGCATGACCAATTAAGTAATTGTGTTAcagctgaaaaaattaaaaatgttacagttaatttaaatattgataaTGAAGTCACCGTACAGCTTATAACAATATATAGAAAATTTCCATCATTGTGGATTTTGGATAAAAATGCATCcaataagaaaaatgtaaaatttaaagagaGGCAAGAAATGTTAAAATCGCTTGCAACACATAACGTACATATATCTATGGATGATTTAGAAGAGTGTCTGACACAACTtcatttacaatattgtgaTATATCGAGAAGGTTAGAAGAAGGAATAGAGATTTCAGATATTGAAgagaaatatttcgaaatgtgtGCATTTTTGAAACCAATAAATAAACCACATCTTGTTATAACTGAAGATGAAAGTGAGAAGTCTGAAACTTTGGATGGAGAAGGTGATAAGTTTATAGGCGATAATGATTTTAACGAAGGCTCACAAAGTGGATATGGCTCCTCCGATGGCGAAGCATTTCAAAGTAAATTGATTGAAACGCAAACACTTGTTAGGTTTTCGATACGTAATAAAATCACCTCTGATTTTATAAAAGGTCTCCGAGAACAGTCCTGTCTATGGGATTCGAAAGACCCTGCTTATAATGACCCAAAAGAGCGTTTACAAGCAATAAATAAGTTGAAAGATTATTTTCTTTCTAACTACAGTATACCCCTTACGGAGGCAAAAATTACAACCGAAATAAGACGTTTGTACAGCTTTTATAAAAGATGTGTGGTTACGCGGAACACCTTGAATGCTAATCGTCAATATTATTATGACAGCTGCGCATTTTTGGCAGGTGCAGAATTGGATGATGTACTCCTAAAACGCACTTACACATATCGTAAAATTTCGTTTCAAACAGTCGATGATTTTACGCTGGGCTTCATTGATTTCTGCGCTATGCATCCTGTACTATGGGACAAAAGCGATCCCAATTATTCCGTATTAAATGTACGTCGACAGGCTTAcgaagaaattgcaaaaaatttacaacaaatttacaatGTTGAATTGAATAATGATGAGATTTATTATGCAATTTCTCGGCTTAAGCATCATTATTATACGTTGCAACGCAAGAATTTACTAAACGGTTCCCTTAACAACATGGAGCAGGAGTTTTTAGAGCGCTGTAGCTTTTTACCAACTTCAAATAACAATCTGCAGTGTCTGATTTGTGAACGAATATTGCGCAGTTATTCCACCTTACAAACACATATGCTAAAAGAGCACAATATTGGTGAACTGCCACATAAATGTGAACATTGCGAACAACGCTTCGAACGAAGAGCTCTGAAAGTTGAACATGAAGTCCGCGCTCATACCAAGCAATTTGAATGGTTTTGCGCATATTGTTCCAAAGGGTTTGCCACGCGTCGTGATATGGAAATACACACATTGGTTCATACGGGAGAGCATACATGCGTTTGCGAACATTGCGGTAAAGGTTTTCGCCTGAAACATCAAATGACCGAGCATGTGAAGATCATGCACGAACGTTTGAAACGCTTCAAGTGCACCATGTGTCCAAAGGACTTCTTTCGAAAACGTCAACTTGACGATCATGTACGTGCACATCTGAATATACGggataaaatttgtaatatttgtggCAAAGGATTTACCAGCATACATGGACTTTTCCGACACAAACAATTACATTCGGACGTAAAGAAATATGAATGCAATATTTGTGGTAAGCGTTTTCATCGTATTTCTGCTTTGAATTCACATAAAAAACTGACGCATAAAAAAGCTAAACAACAAGagagttttttaaatattataagtgAAGAAGAAGAGGATGATAGCGACGCTAATGaaatttctcTTTGA
- Protein Sequence
- MEKSSTIRYFLMWMIVTFIFGASIFLTGFFPINNYTLDRAVAEDKPKDLDGLSLTPPTQIYAQTILMLVDALRFDFASQNGMEFSYNNSCNRLKLRVNIPTVTMPRLKSLTTGTISNFIDIVLNIGHVEQLADSLIHRLQVRNEITVFAGDRTWISLFPKQFTRFTANSDSFYVNDFYEGDKNVTEVLTKELQNDDWMLLVLHYLGLDHIGHVEGSDSSKIPLKLKEMDDVVLKLYKAKHFHKQLLILTGDHGMRDGGGHGGSTAGELYVPLFVLKENCTTKGSSKTNEYNQIDVAPTLAILWSMEIPPMSIGCLIPELLHEFNLEEQLYAYYYNALHLMQKANNKFGQDYVNNNAFSKWFTTAKSAHKQFLLKKRNNNFENAFIFEDAKIHYIRLAREISNQLSDSLVQFDYGLITLGLALTTIVVLNALLAFCTATNRVFIKGKGALLSLLAFAACINKWCHYHGYFTTTGTMSTVVILLAIMASVYMLINIANLLLRRMQTSNNLHNSLPKQIWMLLSCLLIHTLTLASSSFIESENKTWHYLGASALILLCVQSFQKDLLSSKLEACINGVALYKVVLRNLQKLQTSFLIIGGLGILYRLDGAASYLTQEATKTWLSCIFVAGLLLYVLCLRKHKLVQTRKELVIYLTAAMLIYCYRTSKGVVSSVFDTNCCTKIVLPIFWMVVIIAACISTVILYTKRRLSYQIQHTLLTGCFKILLTLLLTICLLLHKPQNVCLVAYLIYTLSLCYELCDKFEKNTLRTSNYKYLSKLLCTILVGNMFYFYQGNSNSFATIDLNPGYIGQTSYNPIIYLIQHSIRRWYVHIMSNANILAELKPCGYILATRQYKYFALKCIHCDKKYGHWSTFLQHLKEFHNEIEDEAHWLFECTEETLSSTCEQSEEYPVECLTEALPANEREAPTSAFLMEGKNDCVDNDFGNLFSDNKMDEDSLAEEAENVLSNREDSPSPTNRFLNETFEDSHDQLSNCVTAEKIKNVTVNLNIDNEVTVQLITIYRKFPSLWILDKNASNKKNVKFKERQEMLKSLATHNVHISMDDLEECLTQLHLQYCDISRRLEEGIEISDIEEKYFEMCAFLKPINKPHLVITEDESEKSETLDGEGDKFIGDNDFNEGSQSGYGSSDGEAFQSKLIETQTLVRFSIRNKITSDFIKGLREQSCLWDSKDPAYNDPKERLQAINKLKDYFLSNYSIPLTEAKITTEIRRLYSFYKRCVVTRNTLNANRQYYYDSCAFLAGAELDDVLLKRTYTYRKISFQTVDDFTLGFIDFCAMHPVLWDKSDPNYSVLNVRRQAYEEIAKNLQQIYNVELNNDEIYYAISRLKHHYYTLQRKNLLNGSLNNMEQEFLERCSFLPTSNNNLQCLICERILRSYSTLQTHMLKEHNIGELPHKCEHCEQRFERRALKVEHEVRAHTKQFEWFCAYCSKGFATRRDMEIHTLVHTGEHTCVCEHCGKGFRLKHQMTEHVKIMHERLKRFKCTMCPKDFFRKRQLDDHVRAHLNIRDKICNICGKGFTSIHGLFRHKQLHSDVKKYECNICGKRFHRISALNSHKKLTHKKAKQQESFLNIISEEEEDDSDANEISL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -