Basic Information

Insect: Bactrocera tryoni
Gene Symbol: -
Assembly: GCA_016617805.2
Location: NC:75650433-75653012[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.5 30 5.0 7.6 1 23 262 285 262 285 0.97

2 8 0.41 24 5.3 2.5 3 23 290 310 288 310 0.94

3 8 3.6e-05 0.0021 18.0 1.5 1 23 314 337 314 337 0.95

4 8 0.00015 0.0091 16.1 0.1 1 23 343 365 343 365 0.98

5 8 2.1e-07 1.3e-05 25.0 5.1 1 23 371 393 371 393 0.98

6 8 4.5e-05 0.0027 17.7 0.7 1 23 397 419 397 419 0.96

7 8 1.3e-05 0.00076 19.4 2.2 1 23 425 447 425 447 0.96

8 8 0.23 14 6.0 3.8 1 12 453 464 453 476 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.5	30	5.0	7.6	1	23	262	285	262	285	0.97
2	8	0.41	24	5.3	2.5	3	23	290	310	288	310	0.94
3	8	3.6e-05	0.0021	18.0	1.5	1	23	314	337	314	337	0.95
4	8	0.00015	0.0091	16.1	0.1	1	23	343	365	343	365	0.98
5	8	2.1e-07	1.3e-05	25.0	5.1	1	23	371	393	371	393	0.98
6	8	4.5e-05	0.0027	17.7	0.7	1	23	397	419	397	419	0.96
7	8	1.3e-05	0.00076	19.4	2.2	1	23	425	447	425	447	0.96
8	8	0.23	14	6.0	3.8	1	12	453	464	453	476	0.89

Sequence Information

Coding Sequence: ATGTCGGTTATTGAATTGAATAAAAGATATCCCTTGGTTCTTGAAGAAAGCAACACTTTCTTTGAGGAATGGAAACGCTGGTGTCGACTTTGTGCAAAAGCCGAAGTGCAATGTATTAATGCTTTAACAGGACACTATGCGCAATCCACACTCGCAAGTGATAATTACAATTCGTTAAACATACTTGCTGCTATAGATGAATTTTTTCACGTTCAGattaaggAAGATGAGAAGCTCTCACCTTTTGTTTGCACTGAGTGTTTCGATGTGGTAACAtcatttgttaaatttaatgatAACGTTAAAAAGGTTCAGCAATTGTACCATGAGCTTTTGCATAGCGATGATAAGACCAAACTCAATTTGCCAGCTTTATATGCTAGGTATGGTCTATGCAGAGAAGAGACTATTTTGACACAAATCAGTAGTAGCAAAGTGCCAGTGGAAGAAATTTTCATTGCTGATTCGCCCGTACCAAAGTGTGCTAATTTATcgattcaaataaaaaatgaaagttctGATGAATTTCCGGCAGAAGTGTTTATTAAAGAGTTCGAGAAAAAGGAAGAATTTCAAGACCCCTTCGGGGAAGAGGAAGTATTCACAGAATTGAAAACCCGTGCGCCTGTAAATGACGACGATAATAGCAGAAGTGAAGATTTCAATTTGCCAATGGATACCGAAGATACTGATGATGAAGACGAAGaagtttatacaaaaaataaaattaataatgacaGTGTAGAGTCAGAAGATTCTGCTGAAATAGCCAAAGAAACGGCACATACTTGTGGTATTTGTTTAATGAGTTTTCATCGCAGATGTAACTATTCGGTACACGTAAAGAAAAAGCATAGTAAACACTTATGCCGGCATTGTCCAAGCTTATTTGATAGTAAACCAGTTTTAAAGGAACATATGAAAGACCATCGACAATTATTCCCCTGCCCACATTGCGATCGCAAATTCGTAACAAAGGAATACGTATCGCAACACATAAAGTTTATACATGATGACGAACGTCCATTTATTTGCGAAACATGCGGTGATGCCGTCCGCACGAAGGGACAACTTAAAGAACACATGTTGACTCACACGGACTATTCGCCCTTTGAATGCAAAGAATGTGGAAAATGCTTTAAGCAAAAACAACGGTTGAAGAGACACATGCAGATACATGGTGACAAACATATTTGTACAGAATGCGGCAAACAACTGAGCACGCGCGCTACACTAAATAGTCACCTACTCGTGCATTCGGACAAGATGCCACACAAATGTGATTATTGTGGACGACTTTTCAAACGTGCTAAAACgcttaaaaatcatttaattgcACATACTGGCCTTCGACCGTATTCATGTGACTTTTGTGACAAAACATTTTCGACAGGACCAAGTTGTCGTTTTCACAAGAAAACTATGCATCCTGTTGAATTGGCTGCTCTGGAGGCATCAGGGGTgaaaacatatacaaaaaatataccaaatttagatGTGTTAAAGGCcgtATCGCGAACTGCGGAAAACCTCACGCCTCTGGCATCCAAACAAAATGGTTATGCAACATTTGATAGAAAAAAAGAACCGCCTAAAGAGGATGTAGAAGCAAAACCAAACGAAACAGCTATGGCAGTCGATACATAA
Protein Sequence: MSVIELNKRYPLVLEESNTFFEEWKRWCRLCAKAEVQCINALTGHYAQSTLASDNYNSLNILAAIDEFFHVQIKEDEKLSPFVCTECFDVVTSFVKFNDNVKKVQQLYHELLHSDDKTKLNLPALYARYGLCREETILTQISSSKVPVEEIFIADSPVPKCANLSIQIKNESSDEFPAEVFIKEFEKKEEFQDPFGEEEVFTELKTRAPVNDDDNSRSEDFNLPMDTEDTDDEDEEVYTKNKINNDSVESEDSAEIAKETAHTCGICLMSFHRRCNYSVHVKKKHSKHLCRHCPSLFDSKPVLKEHMKDHRQLFPCPHCDRKFVTKEYVSQHIKFIHDDERPFICETCGDAVRTKGQLKEHMLTHTDYSPFECKECGKCFKQKQRLKRHMQIHGDKHICTECGKQLSTRATLNSHLLVHSDKMPHKCDYCGRLFKRAKTLKNHLIAHTGLRPYSCDFCDKTFSTGPSCRFHKKTMHPVELAALEASGVKTYTKNIPNLDVLKAVSRTAENLTPLASKQNGYATFDRKKEPPKEDVEAKPNETAMAVDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191626;
90% Identity: iTF_00191626;
80% Identity: -