Btry003695.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera tryoni
Gene Symbol
-
Assembly
GCA_016617805.2
Location
NC:75366075-75371131[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.031 1.9 8.8 1.9 1 23 124 147 124 147 0.94
2 8 0.0004 0.024 14.7 1.3 3 23 373 393 372 393 0.96
3 8 2.8e-06 0.00017 21.5 1.6 1 23 399 421 399 421 0.99
4 8 0.00026 0.015 15.4 0.8 1 23 427 449 427 449 0.99
5 8 0.063 3.8 7.8 0.1 1 23 455 477 455 477 0.95
6 8 0.00069 0.041 14.0 7.2 1 23 483 505 483 505 0.98
7 8 0.013 0.79 10.0 0.3 1 18 508 525 508 525 0.93
8 8 1.2e-05 0.00072 19.5 4.2 1 23 677 700 677 700 0.97

Sequence Information

Coding Sequence
ATGTCGAAAGTTGCAATCAAAACAGAGAAGCTGGATGAAGAGCAGCAGGAGGAGATTGGCATTGAAAGTAATGTAGCAGTTGAGGATGGTGTTGGTGATCACAGCCATGGAAAAGTTGCGTCGTCGACGGATGTGAGTAATTTAATAGAGGCAGGTAAAAAACACTTAGAAGTGGGACGGGACACAAACATATCGATGCGCCAGCTACAACAAAACCAAGCGCAACCTAATGTTTCAACTAAAAACAGTGCAACTGACAATGGCAGCGGTCTAAACCCCAGCAGTGAGATAATTTGCAACAGAAAAGTTGCACTACCCAAATCGAGGTGCGGTGAAGTCTTTGTATCCAATAATGCACGGCAGTGGACATTTATCTGCACCTATTGTAACAAAAGTACACGTGACATTGGCGAATTTATATGccacataaaaattaaacatttgagTGGTTTTGTCGACGACGGCGATGAAACAGATGATGGTGAATACGAAGGAAATCAGCAGTCTAATTTCTATGAACAGGATCAAGATTATTTTGATTGCGGAAACTACTTGGACGTAAATGTGCACACTGAGTCCGAGGACTACAGTTTAAATGGACAAGATCACTCGACAGCCTACCGGCATTCAGGTATTCACAATCCACCCCAACGTCAAGCAGTATCTGCTGGGTCAGGCCCTAAGCAAGGTGAGCTCAATAAACAAGCAGATtcaaataaaaagaataaatacaATGATGCCGAACACGATACAAATGAAGATGAaactgcatttagaaaaaataaagaatcgGCAACACAATGGCGTGCCGATCCAGCCAGTTTCCAatcatatgcaaataaatactcTTTGAAATCTTCAACGCCCGATGTTAAATTGAAAAACAGTGCAAATGGTAATTCTAGTGCCTACGATACTACAGCTGATTTTACTGCGGGCAAAGACGACTTTGACACAACCGGCGCCTTTGAGAATGATGACGAAGAAGATTACGATAATCAACTATTTATTGCACCAACCGACTCATTGGATGCCAGCATACTGGGGGGCGGCACCGATGTTAGTGGTGGTGGTGAAATGAAGGCTAAGCGTCGGCAAATACGCGGCACTGCCTATTGTGCATTGTGCAATAAGACCTTCCAATATTACTCATTATATCGAAATCATATGATAAAACATTCGAATGAGACACCGTTTAAGTGTCCCATTTGCAAGAAAGGTTTTAAATCAAAACAAGCCATACGCTATCATATGAATACACATCAAAAGGAGAAGCAATTCAAATGTACCGTTTGTAGCGCTTCGTATGGTACCGAGAATCATTTCATTGCACATATTATGACACACGAAAGCGCCACTGCGTTTCCATGTATGGTTTGCGGCCAAGTGTTAAGCAGTAGTAAGGAGCGTGATCTTCATATGGCCAATCATAAAGAGGAACGACCCTTCCGTTGCGACTATTGTAACAAGCTCTTCCGGTTGCGACATCATTTATCGAATCATTTGAAGATGCATCGTAAATACCGTTGTGATTATTGCAAAGAGATATTCACCAGCGCTATATACTTGCGAAAACCCTATGCTTGTCCGGGCTGCGTTAATTTGCCTGAAGCGCAGCAGGATGCGGCAAATACCGCAAGCGCGAAAGTAGGACGTGCAGCTACAAGTAACAACGTAAACCCATTGGAAATATTCGAAACAGTAATACCTGGACAACAGCAAGGTAATGAATTTGCACAGATGGTAACAGATTCCGAAGGTGAGGGTGAAGATGAAGATGGCGAAATGGATGACgacgacgatgatgatgataatATGCCACAAGGCACACCAATGGATGAGGATGATGATGATAATGAGAATGTCTCAAGTAGAGCTGCTGAGCAAGACGAGGACGATGATGAAGATGATGTCGAGGAAGAAAATGGCTATGAGAATGGCGCTGGTAGTGGTGGCGGTGGACAGACACTCGGCACTTATGGTGTTGGTGGTGGCGTTGGCGGTACTAGTGGCGTCAGCCTAAAGCGTtatgtatgcaaaatttgtTCTCGCAGCTATTCGCACCCCAGTGGGCTAAACTATCACATGCGGCATAAGCATTGCTAG
Protein Sequence
MSKVAIKTEKLDEEQQEEIGIESNVAVEDGVGDHSHGKVASSTDVSNLIEAGKKHLEVGRDTNISMRQLQQNQAQPNVSTKNSATDNGSGLNPSSEIICNRKVALPKSRCGEVFVSNNARQWTFICTYCNKSTRDIGEFICHIKIKHLSGFVDDGDETDDGEYEGNQQSNFYEQDQDYFDCGNYLDVNVHTESEDYSLNGQDHSTAYRHSGIHNPPQRQAVSAGSGPKQGELNKQADSNKKNKYNDAEHDTNEDETAFRKNKESATQWRADPASFQSYANKYSLKSSTPDVKLKNSANGNSSAYDTTADFTAGKDDFDTTGAFENDDEEDYDNQLFIAPTDSLDASILGGGTDVSGGGEMKAKRRQIRGTAYCALCNKTFQYYSLYRNHMIKHSNETPFKCPICKKGFKSKQAIRYHMNTHQKEKQFKCTVCSASYGTENHFIAHIMTHESATAFPCMVCGQVLSSSKERDLHMANHKEERPFRCDYCNKLFRLRHHLSNHLKMHRKYRCDYCKEIFTSAIYLRKPYACPGCVNLPEAQQDAANTASAKVGRAATSNNVNPLEIFETVIPGQQQGNEFAQMVTDSEGEGEDEDGEMDDDDDDDDNMPQGTPMDEDDDDNENVSSRAAEQDEDDDEDDVEEENGYENGAGSGGGGQTLGTYGVGGGVGGTSGVSLKRYVCKICSRSYSHPSGLNYHMRHKHC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00192348;
90% Identity
iTF_00193089;
80% Identity
-