Basic Information

Insect: Bactrocera tryoni
Gene Symbol: -
Assembly: GCA_016617805.2
Location: NC:12533167-12535403[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.25 15 6.0 0.3 2 23 259 281 258 281 0.93

2 10 2.4 1.5e+02 2.8 3.8 6 23 291 308 291 308 0.98

3 10 8.9e-05 0.0053 16.8 0.4 1 23 314 337 314 337 0.98

4 10 0.00048 0.028 14.5 1.2 1 23 346 368 346 368 0.98

5 10 6.7e-05 0.004 17.2 0.4 1 23 375 398 375 398 0.96

6 10 1.9e-05 0.0011 18.9 0.3 2 23 405 426 404 426 0.95

7 10 0.03 1.8 8.8 3.7 2 23 435 457 434 458 0.95

8 10 0.0077 0.46 10.7 0.1 1 23 464 487 464 487 0.96

9 10 4e-05 0.0024 17.9 2.1 1 23 493 515 493 515 0.98

10 10 0.00015 0.009 16.1 7.4 1 23 521 544 521 544 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.25	15	6.0	0.3	2	23	259	281	258	281	0.93
2	10	2.4	1.5e+02	2.8	3.8	6	23	291	308	291	308	0.98
3	10	8.9e-05	0.0053	16.8	0.4	1	23	314	337	314	337	0.98
4	10	0.00048	0.028	14.5	1.2	1	23	346	368	346	368	0.98
5	10	6.7e-05	0.004	17.2	0.4	1	23	375	398	375	398	0.96
6	10	1.9e-05	0.0011	18.9	0.3	2	23	405	426	404	426	0.95
7	10	0.03	1.8	8.8	3.7	2	23	435	457	434	458	0.95
8	10	0.0077	0.46	10.7	0.1	1	23	464	487	464	487	0.96
9	10	4e-05	0.0024	17.9	2.1	1	23	493	515	493	515	0.98
10	10	0.00015	0.009	16.1	7.4	1	23	521	544	521	544	0.98

Sequence Information

Coding Sequence: ATGTTATGCCGATTGTGCATTAGTGATTGTGATCACAATTCTTTAGAATTATTTGATTCTGGtggaaaaaatacaacaatttaCAATGTTGTTGCGAAGTATTTTGAAAACGAGataaaaaatatgGACGAAGTAAAAGCAGAATTAGATGCTGAACAGCACCAGGGAACGACACAGCATACGTCACAGGTGATTTGCGCGAACTGCTGGCGGCACATAGACGATTTTCATCAATGGCAAAAGGAATTAGTAATCTTAAAAGATGAACGCCTGAAATTACTGCAGCAACCATATCAAAGGGAACTAGTTGAGAGTGTTAAATTGGAAATGGAAATAGATGTAAacaacttaaatatatatgaagaaTCATTTGCTGATGACACATGTGATAACGACGACTATTTCAATGAAGACACTGAAGATCCTGTAGCTATATGTGAAGCCAAACTCTCAACGGCGCCAAAGAAATTGCCTCCCAATAAAGGTAtagaaaatgttgcaaatgaCGATGATGACAGTCTCTATGACGATATGCCATTGTTAAAAAGAAGGAATTTGAGGCAAACCAAAACATCGGCACCAACTAAGAAAAAGGCCGGAAGgcggaaaaaattgaaaaaagttgtcAAGAAAACTTCCGATGTAGATACTGATTTGGATTATAATGAGAATGAAGATAAGGATGAAGCTAATAGtgttgaaaaagttaaagagaAAAGCTCTAAAACCAAGGAGTTTGATGCCTTTATTGCTCAGCATTTCAAGGATAAGTTACCATGTGAATTGTGCGGTCATCTATCTGCTGATTTTACAGAACTACGCACACATTTCCGCGAAGTGCATAACAGTAATAAAGGCTATGTATTGTGCTGCAAGCACAAATACAGCCAACGGTTTCACTTCGTTGAACATTTGCAAGTGCACTTGAATCCACAAAAGTTTCAGTGCGCCGAATGTGGCAAATGCAGTGCTAATGGCAGAAGTTTAGTGGCGCATATGAATTCTATGCACAAGCCTGAGTCATTAGAACGGCGTTTCGAATGTGAAGTTTGCCataaaaaattcgcaaaattaccTATACTGAAAACTCACATGGAGACACATGCGGAGGGCAATCCCGATCACATTTGCAAGGAATGTGGAAAGggCTTTATTTTAGAGAGCCGTCTTAACATTCACATACGCAATGTGCATAGTACAGCTTATCACAGTGTTTGCGACCAGTGTGGTAAATCTTTCCGTGGACGCTATGCACTGAAATATCATCTGCTAGAGCATGACGGTGCGGGAAAACAACTTTGGCCTTGCGATCAATGTGATGCCAAATTACATTCCAAATTTAGTTTGAAACGACATAAACGCATAACCCATCATGACGGTTCCACCGTGTACGTGTGCGGCGAATGTGGAAAAGTAGCTTTAACCGAGGATGCACTAAAGTCACATAAACGCTACGTACATCAACGGGAGCGTATACACAAATGTACGGTGTGCGATAAAGCGTTTAAGGCCTCAAAAGTGTTAAAAGAACATATGACAACGCATACAGGCGAGGACTTGTATCAATGTCCACATTGTCCACGCACATTCAAAGTGAATGCTAATATGCATCACCATCGGAAGAGGAAGCATCCGAAGGAATGGGCGGAAAATCGCAGACACCGACCAATGTCATTCAAACATATGGACCTTAACGCCATTTCGAATGAAGTGGTGCtgtaa
Protein Sequence: MLCRLCISDCDHNSLELFDSGGKNTTIYNVVAKYFENEIKNMDEVKAELDAEQHQGTTQHTSQVICANCWRHIDDFHQWQKELVILKDERLKLLQQPYQRELVESVKLEMEIDVNNLNIYEESFADDTCDNDDYFNEDTEDPVAICEAKLSTAPKKLPPNKGIENVANDDDDSLYDDMPLLKRRNLRQTKTSAPTKKKAGRRKKLKKVVKKTSDVDTDLDYNENEDKDEANSVEKVKEKSSKTKEFDAFIAQHFKDKLPCELCGHLSADFTELRTHFREVHNSNKGYVLCCKHKYSQRFHFVEHLQVHLNPQKFQCAECGKCSANGRSLVAHMNSMHKPESLERRFECEVCHKKFAKLPILKTHMETHAEGNPDHICKECGKGFILESRLNIHIRNVHSTAYHSVCDQCGKSFRGRYALKYHLLEHDGAGKQLWPCDQCDAKLHSKFSLKRHKRITHHDGSTVYVCGECGKVALTEDALKSHKRYVHQRERIHKCTVCDKAFKASKVLKEHMTTHTGEDLYQCPHCPRTFKVNANMHHHRKRKHPKEWAENRRHRPMSFKHMDLNAISNEVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191590;
90% Identity: iTF_00191590;
80% Identity: -