Basic Information

Insect: Bactrocera tryoni
Gene Symbol: Znf574
Assembly: GCA_016617805.2
Location: NC:28524612-28528595[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.029 1.7 8.9 0.0 6 23 412 429 412 429 0.97

2 9 2.5e-05 0.0015 18.5 0.6 1 23 435 457 435 457 0.94

3 9 8.3e-05 0.0049 16.9 3.1 1 23 469 492 469 492 0.91

4 9 0.00065 0.039 14.1 1.7 1 23 500 523 500 523 0.96

5 9 0.0054 0.32 11.2 1.8 3 23 531 551 529 551 0.92

6 9 0.0088 0.52 10.5 1.0 2 23 563 585 562 585 0.97

7 9 7.1e-05 0.0042 17.1 2.0 1 23 592 615 592 615 0.93

8 9 1.7e-06 0.0001 22.2 1.3 1 23 621 643 621 643 0.98

9 9 7.8e-05 0.0046 17.0 1.3 1 23 649 672 649 672 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.029	1.7	8.9	0.0	6	23	412	429	412	429	0.97
2	9	2.5e-05	0.0015	18.5	0.6	1	23	435	457	435	457	0.94
3	9	8.3e-05	0.0049	16.9	3.1	1	23	469	492	469	492	0.91
4	9	0.00065	0.039	14.1	1.7	1	23	500	523	500	523	0.96
5	9	0.0054	0.32	11.2	1.8	3	23	531	551	529	551	0.92
6	9	0.0088	0.52	10.5	1.0	2	23	563	585	562	585	0.97
7	9	7.1e-05	0.0042	17.1	2.0	1	23	592	615	592	615	0.93
8	9	1.7e-06	0.0001	22.2	1.3	1	23	621	643	621	643	0.98
9	9	7.8e-05	0.0046	17.0	1.3	1	23	649	672	649	672	0.97

Sequence Information

Coding Sequence: ATGGCGTGTTTGCTTTGCATGGAAGTTGCCACAACACCGGCACAACGTTTCATTGATATTTTCTCTGAAGAAGGTTGCCAAATGACAGTCTGCAGCATTATAGCCAAGCATTTGTGGTTGaaaCCTGAACGGGATATATGTACGGGTCAACGCATCTGTTGGACATGTTGGGAGGCTTTACGGgactttcatatattttatcaacGTGTAGCCGAGGTACATAATCGTGCAGATTGGAAGACTCCATTTGCTCATATTGAGCAGGAGCAGGAAAACGATCCATTGCCACAAGAAATTCATCTTAAATCGGAAGACGCGGTGGATACCGAGGAAAAGTTACAAAACTCTATAAATGTGGAAGAGAACATATTCGACTCAGaagtAAAATTGGAAGTGTACGATTTGGATTTATTACCACAAATCGAAATCATCGAAGAGAGCACACCCATAAGTGAAAGGGCACAACGCGCAAAGCGTCGTGGCCGTCCTCCAAAAGATGCAAATGCCAAAATATCAGCAACTACTAAACGTGTAAAGCAAGAAACACCTCAACCGTGTGCTGAaaataatgatgatgatgattcaGAAACCGAATTGCCTTTATCTGTCTTACTAAGTACTAGTATCAAGACTGATACCAAGGAAGATGCTAAATCTTCTATTGATACATTACCACAAGACGAAAAATCAAGTGAAAAAGAAGTTACAACTACCGCAACTGCGGAACCGGAGAAACGAAGACGTGGTAGACCTAGAAAAGTACGAAATGATGAAGAAAAACCTAATAATAAAGATGACACGAAAGGTGACATAAAAAATGAGTGTAGTATTATGAATAGCGACGACGAATTTGTAGACAATGATCACGACTTTGCCCCTGCCGGCGGCGTATCAGGAACAGATGATAGCGTTGACTCCAGCAGCGAACATACAGATTCTGATCACAGTTTACCCGACTTCGAACCTAAGCCACAATATGCTGTCATACCGAAAAGAAAGATTGTTAAGCCGAAAAAGTATCGTAAACGCGAAAAACCACTTGTGCCTCCTAAACGTATGTCACGTGAGGAGATCGAGGCGAAGCGTGCACAACAAGATGAATACGATAGAGTAATACGTCAATTTTTCGGACGTTTTGCTTGTCCTAAATGTGAATTGCTGGTACAAAATTTTGCCGAAATACGTGGGCATTTTCGTGCTTCGCATAATGAGGATCCGGGTTATATGATGTGTTGCGGTCGCAAATTTCCACAGAGAAAAGCTTTGGCCgagcatatttatttacattggAATCCAGAACACTTTAAATGCACCACATGCGGTAGGCTATTCACCGACAGTCGTAATCTCGAGCAACATGAAGAGGCGCATGTTAATCCACCCGAACCGAAGGAGCGCAAAATGTTCCAGTGTGACAAATGTCCGAAAGTTTTCACAACAAAGGCGGCTTTTGAACATCACTCCTTTTCCAAGCACGTGCCCAAGTCAGAATTCAAATTCGCATGCACGCAGTGCAATAAAAAATTACCAACACAACGTAAGCTCAAGGATCACATTAAATATAATCACGATCCGGAAAGCACAATTATTTGTGACAAATGCGGCAAACAGGTGCGCACGCAGTACCTTAAAAAACACCATCAACTGGAGCATTCCGAAGTGCCACGGCCTGTGCCCCAGCCAATGCAGTGTCAGATATGTGGCACTTGGTTGCGACACATGTCTGGCCTTAAACAGCATATGAAATCGATACATGAAGATCCGGGTGGTGAACATCGCTGCCAGATTTGTAATAAAGTCTCGACAACATCACGCGCACTCAGGCGTCATATTTACCTCAATCATGAATGTGAGCGCAAATTCAAATGTACAATGTGCGAGAAGGCATTCAAGCGACCACAAGATCTTAGGgAGCATACCTCAACACATACTGGTGAAGTGTTATACACCTGTCCTAATTGTCCAATGACTTTCTTCTCGAATGCTAATATGTATAAACATCGACAGCGTTTGCATCGTGCTGAATGGGAGGCGGATAGGAAAAAGCCCAGGCATATAGCGAATATTATGGCGCAGGCTATGGGTGCGACAGCCGCTTTGAAAGCAAAACAAGCTGTAGGTGCGGCAACGGCTTTTTTCGCACAAAAGATGAACACGAGTGTTAGTACGATTAGTACAGAAAGTGTCAATGCCAATCCGGAGGCCGTGCAACAACATTTAGAAATGACTATACAATAA
Protein Sequence: MACLLCMEVATTPAQRFIDIFSEEGCQMTVCSIIAKHLWLKPERDICTGQRICWTCWEALRDFHIFYQRVAEVHNRADWKTPFAHIEQEQENDPLPQEIHLKSEDAVDTEEKLQNSINVEENIFDSEVKLEVYDLDLLPQIEIIEESTPISERAQRAKRRGRPPKDANAKISATTKRVKQETPQPCAENNDDDDSETELPLSVLLSTSIKTDTKEDAKSSIDTLPQDEKSSEKEVTTTATAEPEKRRRGRPRKVRNDEEKPNNKDDTKGDIKNECSIMNSDDEFVDNDHDFAPAGGVSGTDDSVDSSSEHTDSDHSLPDFEPKPQYAVIPKRKIVKPKKYRKREKPLVPPKRMSREEIEAKRAQQDEYDRVIRQFFGRFACPKCELLVQNFAEIRGHFRASHNEDPGYMMCCGRKFPQRKALAEHIYLHWNPEHFKCTTCGRLFTDSRNLEQHEEAHVNPPEPKERKMFQCDKCPKVFTTKAAFEHHSFSKHVPKSEFKFACTQCNKKLPTQRKLKDHIKYNHDPESTIICDKCGKQVRTQYLKKHHQLEHSEVPRPVPQPMQCQICGTWLRHMSGLKQHMKSIHEDPGGEHRCQICNKVSTTSRALRRHIYLNHECERKFKCTMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPRHIANIMAQAMGATAALKAKQAVGAATAFFAQKMNTSVSTISTESVNANPEAVQQHLEMTIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191553;
90% Identity: iTF_00191553;
80% Identity: -