Basic Information

Insect: Bactrocera tryoni
Gene Symbol: -
Assembly: GCA_016617805.2
Location: NC:60174350-60189853[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.1 1.2e+02 3.0 0.0 1 23 353 376 353 376 0.87

2 12 8.2e-07 4.9e-05 23.2 0.6 1 23 390 412 390 412 0.99

3 12 0.013 0.79 10.0 2.8 1 23 419 441 419 441 0.98

4 12 4e-06 0.00024 21.0 2.0 1 23 447 469 447 469 0.99

5 12 0.0083 0.49 10.6 6.7 1 23 476 498 476 498 0.97

6 12 7.9e-06 0.00047 20.1 1.2 1 23 504 526 504 526 0.96

7 12 3.7e-05 0.0022 18.0 0.3 1 23 532 554 532 554 0.97

8 12 2.2e-06 0.00013 21.9 0.6 1 23 560 583 560 583 0.98

9 12 1.3e-05 0.00076 19.4 2.6 1 23 589 612 589 612 0.95

10 12 0.00013 0.0078 16.3 1.8 1 23 618 640 618 640 0.97

11 12 8e-05 0.0048 16.9 1.5 1 23 646 668 646 668 0.97

12 12 0.0008 0.048 13.8 0.1 1 22 674 695 674 698 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.1	1.2e+02	3.0	0.0	1	23	353	376	353	376	0.87
2	12	8.2e-07	4.9e-05	23.2	0.6	1	23	390	412	390	412	0.99
3	12	0.013	0.79	10.0	2.8	1	23	419	441	419	441	0.98
4	12	4e-06	0.00024	21.0	2.0	1	23	447	469	447	469	0.99
5	12	0.0083	0.49	10.6	6.7	1	23	476	498	476	498	0.97
6	12	7.9e-06	0.00047	20.1	1.2	1	23	504	526	504	526	0.96
7	12	3.7e-05	0.0022	18.0	0.3	1	23	532	554	532	554	0.97
8	12	2.2e-06	0.00013	21.9	0.6	1	23	560	583	560	583	0.98
9	12	1.3e-05	0.00076	19.4	2.6	1	23	589	612	589	612	0.95
10	12	0.00013	0.0078	16.3	1.8	1	23	618	640	618	640	0.97
11	12	8e-05	0.0048	16.9	1.5	1	23	646	668	646	668	0.97
12	12	0.0008	0.048	13.8	0.1	1	22	674	695	674	698	0.92

Sequence Information

Coding Sequence: ATGGTGTTAACTTCAGAGAGAAAATACTTCAGTGGTGAATCACATATTGATGAAGGGAATACTTTAGTCCAGAATGACTTTATGTTAAGAAATGCCAAATGTTTTCTCTGTGATCGCGATTTCGTTGAAGGAGAAGACACTTTCCTAATTTTTGAAATGCGGCTGCGTGAGGATGGTGGAATTGATAACCCTTTGTCTCTTGTATTAGCAACTGCTTTAGGCAgagaattaaatgaaattaactcGCATTCCAACTTACTCTGCTTGTCTtgcaatacaaatattttggagTTTGAGAAACTACTTCATAACTTTTGCGAAGTGcgaataaaaataatcaaagcaTATAATCGAACTGTTCAAATGTACAACATAGATCCCATACTTATTGATTGTGAAAACGAGATATCTCGAATAGAGAAGCCTGAATTAGgtgaattaattgaaaatataattattgatGAATTGCAAAGCAAAACTCTAAACGGAAATTCAACCGAATGCCAGAGTGAAAGCTTAGGATCATTTGGCGATGACACTGCAGAAGCTATTGAGACGAATGTTCTTGTGAACACAGAACTCACGTTGGATGACACTGTAGTGGACTTAATAGAAGAACTTACCGATAGCGAAGAAATGATTGCTGAatctaaacttttaaatattgaaacgCAATACGAGGCACAAAGTGAAAGTTCCCAATTCAATAATTACAGCGGCATTATTGCGAACTTAACAGAAAATCCTCAGCAAGATTTGATGATTTTCCATATGCAAAATGCCGACTCCAGAATCTCTGAACCCTTAATACATTCCGTAGACAAAGAACCCTCAACATGTGGTCCAGATGAAAGTTATAACAGTTcTTCCACTATAAATTGTGCAATTACAACTGACAACCCTGAAGATGTGAACGTTGTGACAGTGGATGCGCAAATTAAAATGGTTTTCGAACAAGTGAATAATCTATATTTTTGCTTATTGTGCGAGGAAGAAAAGACAATGGCACCAGAAGCATTTGCAGAGCATATGCTCAAAAACCatgatttaagtttttattcttGTGAGATTTGTTCTGCTGGTTTTCTTTCTATTGAAAGCATAAAAGAGCATATAGAAAGTATGCATTCAAATTTTTCTAGCACTAAACAAGTTGAAAATTCAGAATATCAATGTGAAGAATGTCAAGAAGTTTTTAGCGATAATCAATTGTTGCGTGTACACAAACGAACGCACAGTAACGTTTCCTTACAATACGAATGCTCAGATTGTCAGAAGAGATATAGTTGCCGAAGAGTGTTGCTTGATCACATGAATATGCATACCGGCCGTCGACCATACAAGTGCACGAAATGCTCAAAGGACTTCGCATCAAAATATACATTGCAAGGGCATATGAAAATTCATAGTGAACGCGTACGCCCATATAAATGTGATAAATGTAATAAATCATTTCTTAACCAACAAACCTTCACTCATCATAAGAAGCTTCACATGGGAGAAAAGTCATTCATATGTGATATTTGCTCAAAGACCTTTAGCACCCAACACAATTTAGATGTTCATAAGATTGTGCATACTGGTCAGCGACCGTTCATATGTCGAACTTGTGGAAAATCTTTCGCACGTCGTGCTGAAATTAAAGATCATGAACGTATACATACGGGAGAGAAACCTTATAAATGTGATATGTGCGATGCTGCATTCGCTCAGCGTTCAAACTTGATGACGCATCGAAAGTCCACACATTTAAATGAGAAATTACACAAGTGCGATCAGTGCGACCGTTCGTTTAAAAGACGCCGTTTGTTGCAGTATCATATCAATGCAGTACACACAGGTGTGCGTCCTCACGAATGCGAAATATGCGGTTCTTCATTTGTTTATCCTGAACATAAGAAAAAGCATATGCTTATACACGGCAATACAAAACCATATACTTGTGAAATATGCGGTAAAGAATTTAACAGTTGCGCCAATCGCAATGCTCATCGTTACGTACATAGTACAAAAAAGCCATACGAATGTCTGAAATGTGGTGCCGGCTTTATGCGCAAACCTTTATTGTTGGCACATATGAAACTTGCTCAACATACGAACGACACCATTATTATTAACCAACCACATATCAGTGACAAAAGGCCGCTAAATTCAAAAAGAGAAATTAGCCTTGTTGACTTGTGTAATGAAACTAACGATGCTCCCGCGAACTCAAACTCACAAGATTCTAATTCAAGTGATGACAAAGCACTGCAATTAATTACTCAAAACACAGAAGATGTTGCCGAAGTAGATAGTGTACAGTACCTGCAATTTGATGATTTAGATAAAGATGGTCATCAAATAATAACTTGGGTGGATATTGGGCGGGATAAAGATCGtaattaa
Protein Sequence: MVLTSERKYFSGESHIDEGNTLVQNDFMLRNAKCFLCDRDFVEGEDTFLIFEMRLREDGGIDNPLSLVLATALGRELNEINSHSNLLCLSCNTNILEFEKLLHNFCEVRIKIIKAYNRTVQMYNIDPILIDCENEISRIEKPELGELIENIIIDELQSKTLNGNSTECQSESLGSFGDDTAEAIETNVLVNTELTLDDTVVDLIEELTDSEEMIAESKLLNIETQYEAQSESSQFNNYSGIIANLTENPQQDLMIFHMQNADSRISEPLIHSVDKEPSTCGPDESYNSSSTINCAITTDNPEDVNVVTVDAQIKMVFEQVNNLYFCLLCEEEKTMAPEAFAEHMLKNHDLSFYSCEICSAGFLSIESIKEHIESMHSNFSSTKQVENSEYQCEECQEVFSDNQLLRVHKRTHSNVSLQYECSDCQKRYSCRRVLLDHMNMHTGRRPYKCTKCSKDFASKYTLQGHMKIHSERVRPYKCDKCNKSFLNQQTFTHHKKLHMGEKSFICDICSKTFSTQHNLDVHKIVHTGQRPFICRTCGKSFARRAEIKDHERIHTGEKPYKCDMCDAAFAQRSNLMTHRKSTHLNEKLHKCDQCDRSFKRRRLLQYHINAVHTGVRPHECEICGSSFVYPEHKKKHMLIHGNTKPYTCEICGKEFNSCANRNAHRYVHSTKKPYECLKCGAGFMRKPLLLAHMKLAQHTNDTIIINQPHISDKRPLNSKREISLVDLCNETNDAPANSNSQDSNSSDDKALQLITQNTEDVAEVDSVQYLQFDDLDKDGHQIITWVDIGRDKDRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192971;
90% Identity: iTF_00191505;
80% Identity: -