Basic Information

Gene Symbol
Zfy1
Assembly
GCA_016617805.2
Location
NC:17514456-17519283[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0048 0.29 11.3 2.7 2 23 370 392 369 392 0.94
2 11 0.14 8.2 6.8 1.0 1 21 461 481 461 482 0.92
3 11 6.9e-05 0.0041 17.1 0.5 1 23 490 512 490 512 0.97
4 11 7.8e-05 0.0046 17.0 0.2 1 23 516 539 516 539 0.91
5 11 3.7e-06 0.00022 21.1 0.2 2 23 546 567 545 567 0.98
6 11 3.8e-08 2.3e-06 27.4 1.0 1 23 573 595 573 595 0.98
7 11 6.4e-06 0.00038 20.4 2.9 1 23 601 623 601 623 0.99
8 11 0.00021 0.012 15.6 0.5 1 23 629 651 629 651 0.98
9 11 1.6e-06 9.6e-05 22.3 2.1 1 23 657 679 657 679 0.98
10 11 0.025 1.5 9.1 7.3 1 23 685 707 685 707 0.98
11 11 2.4e-05 0.0014 18.6 4.7 3 23 715 735 715 735 0.99

Sequence Information

Coding Sequence
ATGGCGATGGATCTTGAGAAAATCTGTCGAACTTGTTTGGGTCTTGGTGGTCCATTACTTTCTATATATGATGGTGGTGGAGGCGGTGGATGTATCGCTGACATGCTACGAGATTTTACCAAAACCAAGCCACGACGAGAAGATAAACTGCCCGAAAGGGTTTGTTTATCTTGTATTAGCGAGATTAATCGTTGCTACTCATTTAAGTTGAAATGTGAGAACTCGTGCAGAACACTGAGGCAACTGGTACCTGATGCGCCTCCAGAAGAATCGGAAAAGGAGTTATCAAAAGCAAAGGTAGTACAAGTTAATAAGTGTGTGCAAACGAATGCTGATGTGCCGAAACAACTTACTACTGTTCATacacaaacaaaagaaaacgtGGTTTCCCAGACTAACCGGTATGTGCAAACGACACCAATATGTAATATAACACATAACAAATCAACGTCCCCTATAAGTGTGAAACCAAATAATACGTTAagatttgataaaataaaattggaaaaaacttTAGGAGTTGAATTTGGcgaagaaattgaaattgtcgaaAGTAGTAAACTTCAGCGCCGAAATAATGTGCAACACACTTTAGCACTCAAGCGCCGACGAATAGATGAATGCTACGAAGAGGTTGGGGAAGATGGAGAAGAAATTATAATGGAATTGCATACAGATGATCCGGATATTGTTGATAATTCAGAAGGAATTACATTATATTCGGCACTGAATGCCGCCGTACAGGATACAGAAGAAGTTAACGATGATACAACCACGTATTATCAGCTTACCCATTCACAATCAGAAAATGAAAGCGAAAGCGGAAACGTTGCAAATAATGAGAATATCATTAGCGAAACGAATCAATTGCGAGATTGTGATGAAGAATTTGATGAAGACGGTGTTTATGCACGATTTATATACACCGCAGAAGAAAATGAGGCATTTAATACTGGCGATGGGAATACGCAATCCGAGGAttacaatttcacaatttttaaaaatgatacTGGCGAAGCTGAAGTCTTAGCAAAGTCCACAGTGACAACGCGATCATCATCAAAAGCGACTGAAGGAAAAAATGTTCGTGTGCTTAAAGAGGAGTTAAAGTGTTGTTATTGTCCGATGACATTTGTTAGTTCTAAGCGCTTAGCACGGCATGAATTAAAGCGACATGCGAGTGAACAAACACGCAAAGAAAATGATTCCATCTCTGAACAGGAACCATCTAAgtcaaaaGGCAGTTTAGAAAATTCGGAAATGAAGAATGATCATAATgaagataaaaatttaatcataGCCGAACCGACACCTATAAAGACCACAATCTCAAGTACGTTGCAACCGATTGTACAGAAGACACAACCGGCTAAATTGATTCACTTCTGTGAGACTTGTGGAGCCGGTTTTGCGCTAAGAAGATCGCTAGTTCATCACAAAAAGCAAAATCTTTGCAATAAAATAACCTTTGATTGCGACAAGTGCCGACGTGTTTTCATTTCGGAAGAGACATTGAAGGAACACCTACTAACACATTTGCAAGATCATGAGTGCACCGAATGTGGCAAGCAGTTTGGCACAAATGATGAACTCGGTCAACATATGGTAGACGAGCATAAACGTAATTTACGGAATCAATGCCCCATTTGCAAAAAAGTTTTTACCATACTATCCGCACTAAAAGATCATTTGCGTGTGCATAGCGGTGAAAAGCCGTTTGTATGCGACATATGCAACAAAGCGTTTAGCCAAAAGACGAACTTGAAGCAGCATATAATGCGACATTCCAAGGAAAAGAAATTCAAATGCGATGAGTGTGCGAGGACTTTTGTTACTAAGGGCGAACTATGCTCACATAGGCGTACACATACCGGTGAACATCCATTCCGCTGCGAAGAATGCTTGGCTACATTCACAATATCAAGTTCGTTGGTGAAGCACAAACGTATACATACTGGTGAACGACCATACGCATGCGATCTGTGCCCGAAACGTTTTACGTCATCATTTACGCTAAAAAATCATAGACGCACTCATACCGGTGAAAAACCGTTCAAGTGTCGCTGGTGCAGCAAAACATTTACACAGAAACAGGATTGCGTTATTCATCATCGTACGCATACTGGTGAACGAAATCATTGGTGTCATGTGTGTGGCGAGAAATTTACACATTTGGGTACATTACGTACGCACATGAAAACACATGAGGCGAAAGATGTCGATGGTGTACCGAAAACTGCTGGCCGAGGAAAAAGGGTTTCGACACGTAGCATGCTCAATACTTCTAAAAGAGATAGTATTGATGGTTCAGCTTACAACATCACCATATTGGATGTTGAAGAAGACGATGGTGATGCTGATGGTGATGTCGATGAAGACACAACTACAGTTGTAACGGTGGCTCGTGAGGATATGGAACGTCTGGTGGCAGGTGGAACGCTAAGACGTAGTGAAGAAGCTACTGTCGGGGAGGAAAAACTTGTTCAACTAGCTATTGAGGAAGTTTAA
Protein Sequence
MAMDLEKICRTCLGLGGPLLSIYDGGGGGGCIADMLRDFTKTKPRREDKLPERVCLSCISEINRCYSFKLKCENSCRTLRQLVPDAPPEESEKELSKAKVVQVNKCVQTNADVPKQLTTVHTQTKENVVSQTNRYVQTTPICNITHNKSTSPISVKPNNTLRFDKIKLEKTLGVEFGEEIEIVESSKLQRRNNVQHTLALKRRRIDECYEEVGEDGEEIIMELHTDDPDIVDNSEGITLYSALNAAVQDTEEVNDDTTTYYQLTHSQSENESESGNVANNENIISETNQLRDCDEEFDEDGVYARFIYTAEENEAFNTGDGNTQSEDYNFTIFKNDTGEAEVLAKSTVTTRSSSKATEGKNVRVLKEELKCCYCPMTFVSSKRLARHELKRHASEQTRKENDSISEQEPSKSKGSLENSEMKNDHNEDKNLIIAEPTPIKTTISSTLQPIVQKTQPAKLIHFCETCGAGFALRRSLVHHKKQNLCNKITFDCDKCRRVFISEETLKEHLLTHLQDHECTECGKQFGTNDELGQHMVDEHKRNLRNQCPICKKVFTILSALKDHLRVHSGEKPFVCDICNKAFSQKTNLKQHIMRHSKEKKFKCDECARTFVTKGELCSHRRTHTGEHPFRCEECLATFTISSSLVKHKRIHTGERPYACDLCPKRFTSSFTLKNHRRTHTGEKPFKCRWCSKTFTQKQDCVIHHRTHTGERNHWCHVCGEKFTHLGTLRTHMKTHEAKDVDGVPKTAGRGKRVSTRSMLNTSKRDSIDGSAYNITILDVEEDDGDADGDVDEDTTTVVTVAREDMERLVAGGTLRRSEEATVGEEKLVQLAIEEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00191503;
90% Identity
iTF_00190814;
80% Identity
-