Btry003158.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera tryoni
Gene Symbol
-
Assembly
GCA_016617805.2
Location
NC:28810911-28816796[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.00079 0.047 13.8 0.6 1 23 309 332 309 332 0.95
2 26 0.19 11 6.4 0.0 3 23 338 359 336 359 0.90
3 26 4.1e-06 0.00025 21.0 0.9 1 23 416 438 416 438 0.99
4 26 0.84 50 4.3 5.2 1 23 440 463 440 463 0.97
5 26 0.0012 0.074 13.2 1.3 2 23 485 507 484 507 0.95
6 26 0.0058 0.35 11.1 1.0 1 23 583 606 583 606 0.94
7 26 0.12 7.1 7.0 0.3 2 23 615 636 614 636 0.95
8 26 0.00021 0.013 15.6 0.1 3 23 644 664 643 664 0.96
9 26 6.9e-06 0.00041 20.3 0.3 2 23 671 692 670 692 0.97
10 26 0.036 2.1 8.6 5.6 1 23 698 720 698 720 0.96
11 26 0.0014 0.081 13.1 0.8 3 23 727 747 726 747 0.90
12 26 0.92 55 4.2 3.4 1 23 753 776 753 776 0.97
13 26 0.11 6.4 7.1 2.4 1 23 1011 1034 1011 1034 0.90
14 26 0.14 8.3 6.7 0.0 3 23 1040 1061 1038 1061 0.90
15 26 0.15 8.7 6.7 0.3 1 23 1067 1089 1067 1089 0.96
16 26 0.018 1.1 9.6 0.5 1 23 1113 1135 1113 1135 0.97
17 26 0.00041 0.024 14.7 2.1 1 23 1137 1160 1137 1160 0.97
18 26 0.0018 0.11 12.6 2.3 1 23 1182 1205 1182 1205 0.98
19 26 0.015 0.92 9.8 4.4 1 23 1221 1244 1221 1244 0.97
20 26 0.11 6.5 7.1 0.2 2 23 1306 1328 1305 1328 0.93
21 26 0.0062 0.37 11.0 0.3 2 23 1337 1358 1336 1358 0.94
22 26 0.0065 0.39 10.9 0.8 1 23 1364 1386 1364 1386 0.97
23 26 2.4e-07 1.4e-05 24.9 0.5 1 23 1391 1413 1391 1413 0.97
24 26 0.0026 0.16 12.2 3.7 1 23 1419 1441 1419 1441 0.98
25 26 0.0022 0.13 12.4 3.1 2 23 1447 1468 1447 1468 0.95
26 26 0.018 1.1 9.5 1.9 1 23 1473 1496 1473 1496 0.97

Sequence Information

Coding Sequence
ATGCAATGTCGCGTGTGTATGCAAAGTAAATGCCAAATATTGTTCGAGATGAATATACTTGGAACGGATGACGGCAAGAACCTTTACGAATGCTTCAATGAATGTACACAACTAGATGCATCAGCAAAGGACCATCTGCCCAAAACGCTATGTAAACTATGtgcacaaaaacttcaaatagcGTATAACTTTAGAAGAAATGCACGACAGTCGAATGAGGAATTTAAGAAACttttaatatctcaaaaattggaAACTGATTCGGTTGATAGTTCACCAGAGGAATTATGTACGCTTGAGGATACCGAAGAAAGTACAGATGATCCATTAGATATGAGTTTTCATGAAGCATTAAAGGCTCTTAAGAAACCTTCGGAGGAATTGACAACGGAAGAGTTTTGTTTAGAGGAAGATCCGGATCAGTCTTTGGAGGAACGTTTAATGGGATTTCCAATGGAAAAGTCGTGCTTAGAAGAAGCTCCAAATCGATTGGAGGAATCTTTGGTGGAATTTCCAACAGAACAGTTTTGCTTAAAGAAATCACCAAATCGATCCTTGGAGGAAGGTTTGATCGAATTTCCAACGGAAAAGTCAAACTTAGAAGTAGCCGCGAATCGACCTTTGGAAGAAGACTTGATGGAATTTTCCACGGAAAAGTCGTGCTTAGAAGTAGTTCCAAGTCCATCTTCCGAGGaacattttaaagaatttcCAACGGAAAAGTCTTGCTTAGAGGAATCCTCAAATCAATCTTACGAGGAAACACATATAGAAATCGTAAGGGAAAGCACACCGGTGGACAATACGGCATTGCATGATAATGATGAACAGTCGCAAGTAATCATGGAGAATGAAATTGAAACACGTAATTCATTTCGGCAGGACGAATATGAGAGTGAAACGGAGCCCGTAAAAAAAGTGGATTACGATTGTGAGATATGTAGTAGTACATACACAAGCaaaaatgaacttgaaaaaCATATATCCCAACAGCATAAATctgAAGTAATTTGTTTAAGTTGTCCAAAGGTATTTGATATGCCTATTGAGTTGAGAATTCACAACCAACTTGTACACGGAACCGATTCACCAGTACAATGTAATTTCTGCAGTGAAAAGCCCCTATTGCCTCGTAATGAGCTTGTCAAACACTTTCAAACAACTCATAATTCTCGCTACTATTGGTATTTCCCACACGTACAAAAACGACATTCAAATGATACGGAGGTTCGTTCGGCCATaaaatacacatgtaaatattgccaaaaaattttcacaacggTTATTGATTTGACAGAACATATTAGATCCCACCTCTTTAAATGTCCATtctgtttgaaaaattttcacagAATGCGTACATATTACTTACATGTTAAACGTTTGCATAACAGTTCAGCAAGCCAATTCCCGGCTATACCATTAGCGGGAGATAGCAAAGATAAGCCGATTCGATGCAAAGCTTGTAACAAAAGCTATACAAATTTAGCCTCCTACAATAAGCATCTAAAAGAAAAGCATAATAAAGGAACAAGATCAAAAGCTAAACAAAAAACGACAGAATATGAAGCAAAGGAAGCTTCGATTGCGGAAGACGAAGACAGGGATACCACCACAGATGCCACTATTGCAGAGGGCGAAGCTTTTGAAAATGAAGACGAAGATGCCGTTCAAGCTCTAAATAAATCGGTTAAAAAGgaacaaagaaaaaagaaaaatgtaccacaaataaaggaaaaaaagagATTTCTCTGTTCATATTGTCCACGTGTGTTATGTTCAAACGTGTCGCTGGCGTCGCACGAAAGAAGTCAGCATCTCAATTCAAAAACAGATATTAAGGAGTGTCCAATATGTCAGAAGAAATTGAAGTCGGATTATATAAGaaatcatattaaaattgtACACATAGGGGAACGTAATAACATTTGCGATATTTGTGGTGGTGCCTATAAGAGTCCTAGTCAACTTAAACGGCACAAGCTGTTGCATATGCCAGACCGTCATTTGCCATGCAGTGTATGTGATAGGAAATTTACGGAAACATCTGCCCTCAAAGTACATATGCGCAGTCACACGGGCGAATTGCCATATGCTTGTCATTTGTGTGATCGTCAATTCCGTATCCGTGTACACCTTACCTATCATTTAGAACACCATgctaatataaagaaaatatgcaaagtttgtGGCAAGGAATTCAAAGATGGCACAACACTGCGGAGACACTCGTTCGAACATAATGGCAAAATGCCATATAGATGCACTGCTTGCCATTATCAAACTGCCAAACGTGAATATATAACGACACATATGCTCCGAAAACATGACATACAAATTACTGACGAAGAATtatatttaatgtttaaaaCGAATACTGGTAAATCGCCTCgcgtaaaaaatgttgaataccTGAAAAAGTTGACTGAAAATTTACAAACGTCAGATAATTCAAATTATAATTGTAACGAAAACAAAGCTtaaaaaatgcactgccgtgctTGTATGCAAGTGGATTGTCATACAGTTGTGGATATGAATTGTGTCGGAACTCCGGAGGATGGTAAAACACTATACGACTACTTTAATGAATGCACTCAACTGCAAGCAACAGCGAATGATGAACTTCCACAAATATTATGTACAACTTGCACAGAAGAATTACATGATGcctataattttataaaaaaggcaCGTAAGTCCGATGGAGAACTCAAAAAGATTTTGACAATCCAAAAAGATGGCGTAGACATTTATACTACTACCCAAACTACACAGTATGCAGTTGAATGTACAAATGATCCATTATCGACGCCAGAACAACTAATTGTCGTAACTGAAACTTCCAACACTGCTAACGATGCTGAAGTGGCTATACCTGTGCCAGAAATAAAAGTAGAGTTAGAGTTAGATATTCctgaagattttgaaaaaataatggagGATCATGTTGTGAAAAGTGATTCCGAAACTTCGCTGCAGGGTAACAGTGATGATGACAGCGGTGACGTTATCAAGCCGGGTGTGTCACATTCTTGTGAAATATGCGATTGCTCATATTTAACGCAAAAGGAACTGAAAGATCATATATTTGATGTACACAAATctcACATCATCTGCATGAAATGTCCAAAAGTTTATGAGCTTCCCACGGAATTACAACTTCATGAATCTCTTGTGCATGGCACGGAATCACCATTTCAATGTACATGGTGTAATGAATCCTTACAACGTGAAGATCTACCTAAACATATTCAGATGACGCATAAGATTtcatattccaaatattttccgCGTACGAAAAGGCGTTGCAATAATAATGATGAGAATAATAGTTTTGAATGTGATGACTGCCAACTGCATTTTTCATCCATACTTGAGTTAGCCTATCATGTAAAGGAACACAAATTTGAATGTCCATTATGTTTAAAGAGTTTTCGAAAACATGGTACGTTTCGGGCACATGTTAAACGCATACATAATCATTCAATAAGTAGCTTAAAAGTTGCGGTTGGTGTTGAGGACGTCGAAGCAAATAAGCCGTACAAGTGTTCCTTATGCTCCAGACAGTTCAGATTGAAACGGTCTCTTCAAGGACATTTGAAAGTGAAACATAACCAGTATACAcggcaaaatgtaaaaaacgacgAGGATAAGCTATTTGAATGTGCGTTTTGCACTATGCGCTTTGCTAGCCAAAATTCGCTTTATCATCACAAAAGACGCAAACATCGAGATTTAATACAAACACCTGTTGCTGATAATGAAAACAATACTACGGTGGTGGAAATGGAGAATGACAAAGCAAACAGTGAATTTGTTAATTGCACATTTTGTCATAAGGATATACCAAGAAGTGAAATTAAGCATCACGAAAGACGACACAAGTATGCCTTGAatcgaaaaagaaaatttctgtGTGCATTCTGCCCGCGTGAATTTAACTCTGAAGCTTCTGTTAAATTGCACGAAAAGAAGGTTCATATGTGTGAAAAACCCGAACCCAAAGAATGTCCAATATGCCAGAAAAAAGTTGAtccgaaatatttaaaaaaccacATGGAGAACGTGCACACGTCCGAGCGTAAATTTATCTGTGATATTTGCGGTGATCCTTTCAAGAGTTACGTTTTGCTTCACAGCCATAAACGTTTGCACTTGGAGCGAAATTTCGCATGCACCGTGTGCGAGAAAAAATTTATACGCTCATCCGATCTGAAAGTACACATGCGCATACACACAGGCGAAGAGCCATATGAATGTCATTTGTGTGATCGTAGATTTAAAATCAAAGTGCGCCTTAATTATCACCTGCAGCGTCATGCTGGCATCAAGCGGAAGTGTCAGGAGTGCGGCAAGGAATTCAATCATGTTAAACAGTTAAAAATCCATTCATATAAACACACTGGCATGCCATATCGATGTTCTGTGTGTGAATACGGCTGTGCGCAGCGTGATGTttttcgaaaGCATTTATTGCGTATGCACGACATGACTATGACTGATGAGGAGTATTGTGCAATGTTCAAAGCGAATACTGGTCGTAATCCACATGTGAAGACTCTGGAGGAATTGCAGTCGGAGGCGCAAAGTATGGAGCAAGAGCAAGAGCAAGAGCAGTCAAACTAA
Protein Sequence
MQCRVCMQSKCQILFEMNILGTDDGKNLYECFNECTQLDASAKDHLPKTLCKLCAQKLQIAYNFRRNARQSNEEFKKLLISQKLETDSVDSSPEELCTLEDTEESTDDPLDMSFHEALKALKKPSEELTTEEFCLEEDPDQSLEERLMGFPMEKSCLEEAPNRLEESLVEFPTEQFCLKKSPNRSLEEGLIEFPTEKSNLEVAANRPLEEDLMEFSTEKSCLEVVPSPSSEEHFKEFPTEKSCLEESSNQSYEETHIEIVRESTPVDNTALHDNDEQSQVIMENEIETRNSFRQDEYESETEPVKKVDYDCEICSSTYTSKNELEKHISQQHKSEVICLSCPKVFDMPIELRIHNQLVHGTDSPVQCNFCSEKPLLPRNELVKHFQTTHNSRYYWYFPHVQKRHSNDTEVRSAIKYTCKYCQKIFTTVIDLTEHIRSHLFKCPFCLKNFHRMRTYYLHVKRLHNSSASQFPAIPLAGDSKDKPIRCKACNKSYTNLASYNKHLKEKHNKGTRSKAKQKTTEYEAKEASIAEDEDRDTTTDATIAEGEAFENEDEDAVQALNKSVKKEQRKKKNVPQIKEKKRFLCSYCPRVLCSNVSLASHERSQHLNSKTDIKECPICQKKLKSDYIRNHIKIVHIGERNNICDICGGAYKSPSQLKRHKLLHMPDRHLPCSVCDRKFTETSALKVHMRSHTGELPYACHLCDRQFRIRVHLTYHLEHHANIKKICKVCGKEFKDGTTLRRHSFEHNGKMPYRCTACHYQTAKREYITTHMLRKHDIQITDEELYLMFKTNTGKSPRVKNVEYLKKLTENLQTSDNSNYNCNENKA*KMHCRACMQVDCHTVVDMNCVGTPEDGKTLYDYFNECTQLQATANDELPQILCTTCTEELHDAYNFIKKARKSDGELKKILTIQKDGVDIYTTTQTTQYAVECTNDPLSTPEQLIVVTETSNTANDAEVAIPVPEIKVELELDIPEDFEKIMEDHVVKSDSETSLQGNSDDDSGDVIKPGVSHSCEICDCSYLTQKELKDHIFDVHKSHIICMKCPKVYELPTELQLHESLVHGTESPFQCTWCNESLQREDLPKHIQMTHKISYSKYFPRTKRRCNNNDENNSFECDDCQLHFSSILELAYHVKEHKFECPLCLKSFRKHGTFRAHVKRIHNHSISSLKVAVGVEDVEANKPYKCSLCSRQFRLKRSLQGHLKVKHNQYTRQNVKNDEDKLFECAFCTMRFASQNSLYHHKRRKHRDLIQTPVADNENNTTVVEMENDKANSEFVNCTFCHKDIPRSEIKHHERRHKYALNRKRKFLCAFCPREFNSEASVKLHEKKVHMCEKPEPKECPICQKKVDPKYLKNHMENVHTSERKFICDICGDPFKSYVLLHSHKRLHLERNFACTVCEKKFIRSSDLKVHMRIHTGEEPYECHLCDRRFKIKVRLNYHLQRHAGIKRKCQECGKEFNHVKQLKIHSYKHTGMPYRCSVCEYGCAQRDVFRKHLLRMHDMTMTDEEYCAMFKANTGRNPHVKTLEELQSEAQSMEQEQEQEQSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00191497;
90% Identity
-
80% Identity
-