Btry011647.1
Basic Information
- Insect
- Bactrocera tryoni
- Gene Symbol
- grau
- Assembly
- GCA_016617805.2
- Location
- NC:28511546-28524176[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 8.8 5.2e+02 1.1 0.1 2 23 267 289 266 289 0.92 2 31 3.7 2.2e+02 2.3 0.1 6 23 298 315 298 315 0.97 3 31 0.0062 0.37 11.0 0.7 1 23 321 344 321 344 0.95 4 31 5.9e-05 0.0035 17.4 1.0 1 23 351 373 351 373 0.97 5 31 7.7e-05 0.0046 17.0 2.3 2 23 382 404 381 404 0.96 6 31 0.002 0.12 12.5 0.6 3 23 412 432 411 432 0.96 7 31 0.001 0.062 13.4 0.1 2 23 441 463 440 463 0.96 8 31 1.4e-06 8.3e-05 22.5 2.8 1 23 500 522 500 522 0.97 9 31 0.00036 0.021 14.9 2.2 1 23 528 551 528 551 0.98 10 31 0.049 2.9 8.2 1.9 2 23 796 818 795 818 0.94 11 31 0.0023 0.13 12.4 5.8 1 23 850 873 850 873 0.96 12 31 4.5e-06 0.00027 20.9 0.8 1 23 881 903 881 903 0.98 13 31 0.0007 0.042 14.0 3.7 2 23 912 934 911 934 0.95 14 31 0.0026 0.15 12.2 0.1 3 23 942 962 941 962 0.95 15 31 0.00017 0.0099 15.9 1.5 2 23 971 993 971 993 0.98 16 31 1.9 1.1e+02 3.2 0.4 3 23 1003 1024 1001 1024 0.88 17 31 0.00014 0.0081 16.2 2.6 1 23 1029 1051 1029 1051 0.97 18 31 0.0029 0.18 12.0 1.8 1 23 1057 1080 1057 1080 0.98 19 31 2.2 1.3e+02 3.0 0.0 6 23 1303 1320 1303 1320 0.98 20 31 0.053 3.2 8.1 3.7 1 23 1326 1349 1326 1349 0.95 21 31 8.2 4.9e+02 1.2 0.1 2 11 1369 1378 1368 1382 0.85 22 31 0.61 36 4.7 5.7 1 23 1612 1635 1612 1635 0.95 23 31 8.3 4.9e+02 1.2 0.1 6 23 1644 1661 1644 1661 0.95 24 31 0.025 1.5 9.1 2.6 1 23 1667 1690 1667 1690 0.95 25 31 0.0011 0.063 13.4 5.5 1 23 1697 1719 1697 1719 0.98 26 31 1.8e-05 0.0011 19.0 0.1 2 23 1728 1750 1727 1750 0.95 27 31 0.01 0.6 10.3 0.0 3 23 1758 1778 1757 1778 0.96 28 31 0.00018 0.01 15.9 0.1 2 23 1787 1809 1786 1809 0.97 29 31 1.6 95 3.4 0.6 2 23 1818 1840 1817 1840 0.84 30 31 1.2e-05 0.00072 19.5 2.2 1 23 1846 1868 1846 1868 0.97 31 31 0.00071 0.042 14.0 3.4 1 23 1874 1897 1874 1897 0.98
Sequence Information
- Coding Sequence
- ATGATGTTTGACAAACTGTCCTGTTTATTATGCTTGGAAAAAAACAATGTTTCAAACagtcaaataaatattgattctGATGATCCGCAAGCAGTAAAAGCTCGCGCGATGGTTGAACAACATTTCAAGGAAGAGCTCAGCATGAAGCCGTACCTTACAAACAAAGTGTTATGTCAACAATGCTGGGAACTGTTACTATCATTTCATGAATTCTATGTGCGCGTACAAAACGCTCACTTGACGGCAACTAACACGCTAAAGTCCTTGCAAGAGTTAGAGATAGCGGTTactgaaataaaaatggaaCCTGATGCATTAGACGAGCTGGCTTCGCCCCCAAAACGTCGTCGGGGGCGACCGCGGCGAGAAAAGCCGAACGAACATGTTTTGGAATCACAGCCATCAATTGTTTTAAAAGAGTGCAGTGTTCGGATTGAACCACTAACTTTTCCTTATAACAGTAACATCAACAAAACCGAAGATAAAAACTTGGAGTTTTTGGAAGTTAAGAGTGAGGTAATACCTGATGAAAATGAATCTATTGATCCAATTTATTCACCACAAATGTCTAATAATGAGAGCGAATCAGGAATTGCGACAGTACCTACCAGTCCTGCAAAGAACTTAGAAACCGGTGCGccacaaaaacagaaaacagtCCGTACCAAGAAGAGGCAAAAACGAAAGCGTACCGAGAAAAATAGTAAGGCATTAAATACaggaattaaaaatgaattaaacaCGCAACGAAATAAAACATCGGATTATGATGAGtttattgccaaaaattttaaactaacatGCGCTCTTTGCGAAAACCCACTAGAAAACTTTAGAGaacttaaaatacattttcggGAAGAGCATCAGACTAATGGATATGTGAAATGTTGTGGTAAAAAACTAATTAGACGTGGCGTACTTGTTGatcatataaaatttcatacCAACCCAGAATACTTCAAATGCGAACATTGTGAAAAACTGTTTGCCGATGGGCGTGGCCTTGAGGCGCATCTTCAATTTTCACACGGTTCTAGAGAACGTATTTATCGCTGTGATATTTGTTCCAAAGGATTCTTTCGTCGTGAATTACTCACTCGGCACTACGTTATACACGCACCTGAAGAACAGAAGAACATCAAATGCCCTCAGTGTGAGAAGACGTTCTGCTATAAATACAATATGCTACAGCATTTAAAAATAGTTCATCTACATTCGTATTCGAAAATATGTGACATTTGTGGAAAATCCTTCCATGGAGGTGAAGCATTCCGCCGGCATCAGCAGGAGCACGCTGGTATACCAAGATTACCGATTAAGTGTGAATTATGTAATGCTGAACTGACGACAAAGTATGGTTTAGCACGGCATATGAAAGTAATGCACACGGAGGAATATCAAACACCTCAAGTTTGCCCAGTATGCTCTAAAATATCACCGTCTCTCCGCGCACATCAtacccattttaaatttatgcatgCCACCGAGAAAAAACACTCCTGCAAAATGTGTGACAAAGCTTTTAAACGACCCAAAGACTtacgaGAACATATGACAACTCATACCGGAGAAGTTCTATATACGTGCACATTTTGTCCACAAACATTCAACTCGAATGCGAATATGTATGCACATCGAAAGCGAAAACATCCTAAAGAATGGGCTGAAAAATGTGCAAAGCGAAATACTTCTATAGGAATGGGACAACAGATACAAAAGGACTTAGAATCCATAATCGAATCAGTAAAAGATACGGATGAAACAAATGATAATATTTACAGAATGCCTTTTGATCAGTGTTGTCTGTTATGTTTAGAAAAAGTTAGTCCCACTGACAACAGAATAAATATCAATAGCGATGACTCGGAATCGGTAAATGTGCGGAATATAATTGAACAACATTTCAAGGAAGAGATCTTCACGATGCCAACATTATCAAATCACattgtatgtaaaaaatgttgGGAATTGCTGAAGTCATTTCATGAATTTTATATCCAAGTAACACAAGCCCATCTGCAAGCGCATAACAAACTCAAGGCTTTGCAAGAGTGTGAAATATCGGTTACAGACATTAAAGTGGAACCGGATGCTGAAGACAAATTGGCTTTGCAAGAGTTGGAGGAAATAACGATTACAGACATTAAAGTGGAACCGGATATTGTTGACACATTGGCTTCATCACCAGTCGGTGAAGAAAAAGATTCCGATTACTCGGATGATGAAAATAGTAGCTCATCTTCTGTAAACTCTGAAAGTCAAGAAGATGTCCAGGAAGAGAAAagacagaaaacaaaaacaaaaagagccCCTAAACCCCGAAATAAGAAACGACACAAAACATTGGACCATGATCAATTTAttgcacaaaattttaaattgatctGCTGTTTATGTGAAAAATCGTTGAAAGATTTTCGAGAATTGAAAATTCATTATCGCCAAGAACATCAAACAAATGGCTATGCTAAGTGTTGTAATAAAAAGTTGTACAATCGTGGCGTTCTCGTTGATCATATTCACTTTCATATTAATCCAGAATACTTCAAGtgtaaattttgtgaaaaagtgTTATGCGATCGAAGTAATCTCGAATCACATTTACAACATTTTCATGATTCCAAAGAACGTACGATATATAGATGTGAAATATGTGGCAAAAGTTTTTATCGACGCAAAGTTCTTGCACGGCATTACCTAATCCATGCACCCGAAGAACAAAGAAATGTGAAATGCACCCAGTGTGAAAAAACATTCTGCAATCAGTACCTTATGAAACAACATCTAAATCTGAGCCATCTCAATTTATATGCTAAAATTTGTGATATTTGTGGCAAATCCCTAAACGGCAGCGAAGCTTTCCAACGGCATCAGGATGAACATGCTGGTGTGCAACGAACAAGGGAGAAATGTAAAATATGCAATATGGAGCTAAAGACGAAATATGGTCTGGCGAGACATATGAAAACAAGGCATACCGAACCGTTTCAAACACCGCAGATCTGTCCAGTTTGCTCTAAAGTATCTCCCACTCTACGGGCGCATAAAAGTCACATGGAGTATATGCACAGCGGTAAAAAACACGTTTGCACTGTTTGtgacaaaatatttaaactgcCTAAATGTTTAAGGGAACATATGGCCACACACACCGGAGAAAAATTATATACGTGCACATTTTGCCCACAAACATTCAATTCAGATGCGAACATGTACGCACATCGAAAGCGAAAACATCCTAAAGAATGGGCTGAAAAATGTGCGAAGCGAAGTACTTCTACAGGAATGGGACAACAGCTAATAAATGACTTACAATCCATAACCGAAACAGTGAAAGATACGGATGAAACAAATTTGGATATTATATctcaaattgaaataaaattcctTTGTCGGATATGTTGGGATTATGTACAAacatttcatacattttatgaaaatgtgaAAGAAGTGCACAAGGAAGCGGCGAACTCATTGAAAAGCGTGACTTTGGaagaagaaattttagaaataaaagagGAAATCTTAGAACTAAAAGAGGAACTCATACATATTGACGACGTACAAGTTGAACCAAGACGTCGTAGGGGACGTCCAAAACGTCAAAGAGAACTTGAAACTGTCGAAGTCCCTTGTGAGTCTTCCATACCGCTTAAAGAATGTCAAGTTAAAATTGGAGAACTAAAATTACCCGTTTCCGGTTCAACTAGTCGGACAGATATATGtaatcaatctgaaattttttctgaagTATTAGAGGTTAAAGATGATATTTTACTCAAAGAACATATGGAGAACTCGGTATCAGAATACAGTTCGGACCCTGAAGAAATAGAGAAAAACTTCAAACATTTAAAAAGCCATTTTCGTGTAGTACATCAAACTCGTGGCTATGTGCTATGTTGTGGTAAAAAATTGCCTGAACGCGGTTTGTTAATTGATCATATTAATTTGCATGAGGATCCTGACTACTTCAAATGTAAGCATTGTGGAAAGAGAATGACGGAACGTCGTAGCCTTGATCTTCATCTCCAGTATAAGCATGCATCTTGTTTGAAACAGcattataaaattaaagataCAGAAAATCAAAAATCGATATCGTGCTTAGAATGTGACAAAACatatataaaaatgtttaatgagTCATGTTGTTTACTATGCTTGGAAAGTTCAAAGGATCAAATAGATTTGGACTGCAAAGAAGGTATCGGTTTGAATGGGCGGGAAGTGATTGAATTGCATTTTAAAGAGGAGttggATATGATGTctcaaattgaaataaaattcatttgtcGAAAATGCTGGGATTTGGTAGATACATTTCATAACTTTTATGAACATGTGAAGCAAGTGCACCAGGAAGCGGCGAACACATTGAAAAGCGTGACTTTAGAAGAGGAAATCttagaaataaaagaagaaatcatAAATAATGACGACGCACAAGTTGAACCAAGACGTCGTAGGGGACGTCCTAAACGGCAAAGAGGAGCTGAAACTGTCGAAGTCCTTTGTGAGCCTTCCATACCACTCAAGGAATGTCAAGTTAAAATTGAAGAACTAATATTACCCGCCTCCATGAGTCCCAAAGATATATGTAATCAATCTCAGATTGTTTCTGAAGCCTTAGAGGTTAAAGATGAGTCCTTGCTCGAAAAATGTATGGATAATTCTATATCGACATTTAGTTCAGACTACGAAGAATCGGAGAGTGAGAATGAAGAagataaacaaacaaaaagaaaatatcgtaaaataaataaaagaaaaggtgttaataaaaaaactgcGGAATCGGATGAATATAtagcaaagaaaaattttaaattttcttgttgCATTTGTCAAACTTCATTGGAAAACTTCAAACATTTGAAAAGTCATTTTCGTGAAGAACATCAAACGAGTGGTTATGTGCTATGTTGTGGTAAAAAATTACCTGAACGCGGTTTGTTAATTGATCATATTCATTTTCATGAAGATCCTGACTACTTCAAATGTAAACATTGCGGAAAGCGAATGTCGGAGCGACGTAGCCTCGATCTTCATCTTCAGTATGCGCATGGAAATCGGGAACGAGTACATCGTTGTTCAATTTGTTCTAAAGGATTTTTCCGAGCATCTTGTTTAAAACAGCATTATAATATTCACGTTACAGAAGATCAAAAAACGGTACCGTGTTTAGAATGTGGTAAAACCTTCCCAGACGACGTTGAATTAAGAAAACACATGCGTCTAACCCATTTGaatgtttatgcaaaaatatgtgaTATTTGTGGTATATCGATAAAGGGGCGCGATGCTCTGGAACGGCATCAGGCCGAGCATGCTGGTGTGCCACGAAAACTAATCAAATGTGATCTATGTGATGCTGCGCTCACTACAAAATATGGTCTAGCACGTCATATGAAAACTATGCATACTGAAGAGTATCAGACGCCACAGGTCTGCCCAATGTGCTCTAAAGTGTCACCATCTCTGCAGGCTCACCGTaaccatataaaatatatgcattctTTGCAAAGGAAACATGTCTGCAAATTATGTGACAAGGCCTTTAAGCGGCTTACCGATTTCAAAGAGCACATGGCCACCCATACCGGAGAAGCTTTATATACCTGTAGTTTTTGTCCACAAACTTTCAAATCTAATGCCAATATGTACTCTCATCGAAAGAAGAAACACGCTAAGGAGTGGGCACAGCAATGCGCGTTGAAGAAAAGCTTAGCGGTACCCTTGAAGCAACCTGTCGTAACTgactaa
- Protein Sequence
- MMFDKLSCLLCLEKNNVSNSQINIDSDDPQAVKARAMVEQHFKEELSMKPYLTNKVLCQQCWELLLSFHEFYVRVQNAHLTATNTLKSLQELEIAVTEIKMEPDALDELASPPKRRRGRPRREKPNEHVLESQPSIVLKECSVRIEPLTFPYNSNINKTEDKNLEFLEVKSEVIPDENESIDPIYSPQMSNNESESGIATVPTSPAKNLETGAPQKQKTVRTKKRQKRKRTEKNSKALNTGIKNELNTQRNKTSDYDEFIAKNFKLTCALCENPLENFRELKIHFREEHQTNGYVKCCGKKLIRRGVLVDHIKFHTNPEYFKCEHCEKLFADGRGLEAHLQFSHGSRERIYRCDICSKGFFRRELLTRHYVIHAPEEQKNIKCPQCEKTFCYKYNMLQHLKIVHLHSYSKICDICGKSFHGGEAFRRHQQEHAGIPRLPIKCELCNAELTTKYGLARHMKVMHTEEYQTPQVCPVCSKISPSLRAHHTHFKFMHATEKKHSCKMCDKAFKRPKDLREHMTTHTGEVLYTCTFCPQTFNSNANMYAHRKRKHPKEWAEKCAKRNTSIGMGQQIQKDLESIIESVKDTDETNDNIYRMPFDQCCLLCLEKVSPTDNRININSDDSESVNVRNIIEQHFKEEIFTMPTLSNHIVCKKCWELLKSFHEFYIQVTQAHLQAHNKLKALQECEISVTDIKVEPDAEDKLALQELEEITITDIKVEPDIVDTLASSPVGEEKDSDYSDDENSSSSSVNSESQEDVQEEKRQKTKTKRAPKPRNKKRHKTLDHDQFIAQNFKLICCLCEKSLKDFRELKIHYRQEHQTNGYAKCCNKKLYNRGVLVDHIHFHINPEYFKCKFCEKVLCDRSNLESHLQHFHDSKERTIYRCEICGKSFYRRKVLARHYLIHAPEEQRNVKCTQCEKTFCNQYLMKQHLNLSHLNLYAKICDICGKSLNGSEAFQRHQDEHAGVQRTREKCKICNMELKTKYGLARHMKTRHTEPFQTPQICPVCSKVSPTLRAHKSHMEYMHSGKKHVCTVCDKIFKLPKCLREHMATHTGEKLYTCTFCPQTFNSDANMYAHRKRKHPKEWAEKCAKRSTSTGMGQQLINDLQSITETVKDTDETNLDIISQIEIKFLCRICWDYVQTFHTFYENVKEVHKEAANSLKSVTLEEEILEIKEEILELKEELIHIDDVQVEPRRRRGRPKRQRELETVEVPCESSIPLKECQVKIGELKLPVSGSTSRTDICNQSEIFSEVLEVKDDILLKEHMENSVSEYSSDPEEIEKNFKHLKSHFRVVHQTRGYVLCCGKKLPERGLLIDHINLHEDPDYFKCKHCGKRMTERRSLDLHLQYKHASCLKQHYKIKDTENQKSISCLECDKTYIKMFNESCCLLCLESSKDQIDLDCKEGIGLNGREVIELHFKEELDMMSQIEIKFICRKCWDLVDTFHNFYEHVKQVHQEAANTLKSVTLEEEILEIKEEIINNDDAQVEPRRRRGRPKRQRGAETVEVLCEPSIPLKECQVKIEELILPASMSPKDICNQSQIVSEALEVKDESLLEKCMDNSISTFSSDYEESESENEEDKQTKRKYRKINKRKGVNKKTAESDEYIAKKNFKFSCCICQTSLENFKHLKSHFREEHQTSGYVLCCGKKLPERGLLIDHIHFHEDPDYFKCKHCGKRMSERRSLDLHLQYAHGNRERVHRCSICSKGFFRASCLKQHYNIHVTEDQKTVPCLECGKTFPDDVELRKHMRLTHLNVYAKICDICGISIKGRDALERHQAEHAGVPRKLIKCDLCDAALTTKYGLARHMKTMHTEEYQTPQVCPMCSKVSPSLQAHRNHIKYMHSLQRKHVCKLCDKAFKRLTDFKEHMATHTGEALYTCSFCPQTFKSNANMYSHRKKKHAKEWAQQCALKKSLAVPLKQPVVTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -