Basic Information

Gene Symbol
RERE
Assembly
GCA_016617805.2
Location
NC:47307665-47361837[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-07 9.9e-05 22.0 0.3 2 45 125 169 124 170 0.87

Sequence Information

Coding Sequence
ATGGCGGCCTCCACTCAGGGAGAAATTCGAGTGGGTCCCGGCCACCAGGTAAACGATGTCTATGCAAAATTGCCCGATTATAATCCAATTTCAAGCTTCCCCGTTGACAAAGAGAGCGACGAACGTGAATTAGAAGAATCAAGATGGAGTCCTGGCATTGTGGCCGATGGCGATTTGTTAATGTTTTTGCGTGCGGCGCGTTCTATGGCTGCATTTCAAGGAATGTGTGATGGAGGTTTAGAAGACGGTTGTTTGGCTGCTAGTCGTGACGATACAACAATTAACGCATTGGATATTTTACACGATTCTGGTTACGATCCAGGCAAAGCACTACAAGCACTCGTTAAGTGTCCCGTTTCGAAGGGCATCGATAAAAAGTGGACCGAGGACGAAACAAAGAAATTCATTAAGGGCTTACGGCAATTCGGTAAGAATTTCTTTCGCATACACAAAGATTTACTACCGCACAAAGAGACACCCGAATTGGTGGAATTTTACTATTTGTGGAAGAAGACACCGGGTGCCAATAATAATCGACCGCATCGTCGACGCCGGCAAAGTGCCTTGCGTCGCAATCGTGTCACACGCGCTAGTAATACACCTCCGAAGAAGGAGGATACACCGGAACCACAAACGGCGACGACGGCGTCAGCGGCGGCAGATTCGACGCGCTCGTCGCCCGTTGTCTCCAAGGAGGAGAATAGTTCTCTAACCGAGGACGATATCAGCGAGTGCGACAGCGATTCCAGTCTGACAAACAAAAGGGATGAATCACCATCTAGAATGAGGACACGCaataaacagcagcaacaacaacaacagaataaCAATACAAAAGACCAAGTAGCGAATGGTAAACGACCCAAACGTGGTACTGAAACTCCCGATACAGTAACAGCAGCCGATAGTCCAAAGACACCAACTAAAGGAGCAAACGCAAACGCTGAGAATAATACGACAACGACGGTGGCGGCGAATAAGCGTAAAGGCGGTAAGCAGGATACGCCGAACAAGAAGAAGCGTACCGATGTGGATGGTAGCGCAGGTTCtggcagcggcggcggcagTGGTGATGTCACCGATGATGGCAGCAGCCTTAGTAAGGACAGTGGTAAGCGTAAGCGACCCGATAGTCCGGCGGAAGAGAGCATGAACTCGGATAGTCGACCTGATTCGGTAATGGATGATGCCGAGTCAAATACGACCGATACCGTAGAACAGTCGTTAAAAGAGGGCAAGGATAGCTCCGCCGGCAAAGAAGATAGTGGTGCTGCAGATGGCGATTCAAAGGCGGATATTATTGAGAAATCGGAAAAGCCTGCTGAAGACACCAAAGAGACGATCAAAAATGATGATGAAGAGACAAATATACAAGCGCCAGTTAGCGGGCAAGCGCCTGTAGCGCCACCAACAAGCGATGCCGGTAGCGTTGCGACTAAAGAGCCGATCTCCAATGCTAACGAGGAGAACATGAGTGTGGTCAGTGCGCCGCCAACACCCATGAAAGTGCCGACAATAGCTACCGTTGAAGCGTTAAATGCTTCGATTGGCCGCGGCGAATTGTCCACGGAACGAAAAGACACTGTTGAAAAAATGGATGTGTCGGAAAGTAATTCTGTTGCCGTTGATATAGCGAAGGAGCAGGAGATGATGAAGAAGATCGCCAATATGAAGCAAGAATcaatgcagcaacaacagcagcagcaacaacaactgccacCAAACAATACtaatgtgaatatgcaagaaacCGCAGTATTCATTAAGAAAGAACCTTTGGATGATTCCATGGATGCTACTTGCAATCAGAACAGTAATGAACCGCAAGATCTAAAAGTTAAAGTGGAGATTAAAAACGAGGAGTGCAAAAATAATGTGGGCATGCCGCCGACATCAATGTCTTCAGCGGTCAATGACTCAGGCGGAGGTCCAGAGGCACCGCCACAGCCGCCGCACATGCATATGCACCTACCACCAACCGGTGTCCAACCACCACCCGGATATATTTTAGATGGGCAACTCAAGTATGGACCGCCGCCACCACAATCGATGCCAAGTAATGATAACAACGCACCGCCACCGTCGGGCATGCCCTTAGGTGGCCCTCCACCAACGCACAAGTATCCTGGTGATATGGAAATGAAGTACAATGAGTCTGCAGcggcggctgctgctgctgttgctggcaTCAAATATGAAGGTGGCAAATTTGCAATGCAGGATATCAAGTATCCACCACCTCCACTGGAACACGCCATGAAGTATGGCACAGTACAAGATATGCAAGCAGCAGccgcggcggcggcggcagcagctGCTGCAGCAGCGGGTAAATATGATATGAAATTTGCCCTGGAACAACCGGGCAAGTATCCCGGCGATCTATCTGCACATCAACAACCGCCGAAAGGTTTCCCAGGTGAGCAGCTAAAGTTGCCTGAGATGAAGGCCTCAAGTATTTATAACATGCCAAATGCTGAAAGCAAATATGCGCCTGCGGCCAGTCAGCCGGGCGATGTAGGTGGTTTGAAGTACGTTGGCCCAGGTGTACCGCAAGATCCGCAGCCACCACCTACGCACGGTGCGCCACCTGGTGCTACGCCGCCACCCGGCATTGCGATGCCGAAGCCTCACTATCAGCATGAGGTGCAACATCCCTTGGCGCGTTCTGCTTTTGAGTCAAGCTTAATGCTAAAGTATGGCGATCCAATGTCTGCAAAGTATGGACCGCCACAAGATTTGAAGTATCCGCCACCGCCTCAAGGCTCAAATGATGGTGGTCCAATGAAACCATCACCGTATGCGGAAAATCTGGTTAAAGGTTCTCCTTACGGCACTCAAGAGCCTGGTGGTATGAAATACCCGCCTTCAGAAAGCCCAATAGATGCATCATCTCGTTCGACCCCGGGTCAGGACAGTCAGGGAAGCAATAGTAGTTCACAGCCGTCGTCACAGCAACAGCAATTCCAATCGCCGCATCCATCACCACATTTGCCTTCACCGGCTGGTGGTGGTTTACCGCCTGGCATGCatccacaaaatttggtatcACCCCACGGACCGCCATCTCATGGTCAGTTGAATTCCGGTATGCCACCTGGTGCATCTGGTCCACCACCACCCAGTTCAATGCATCATCCACATCTAACGCCATCCCCGAACAACTCGCAACAATTACAAGGACCACACCCACAGTCGTCTGTAGCTTCATCGATGCCACCGTCTTCAGTTGGCGCACCTCCGCCATTGTCAACGGTAGCACCGTCAGGCCTACATCCCCAGCACCTCCCGCCCAGTCACCTGCAACAGTTGCATCGTCAGCATCCAGATATGCCCGCTGGTATGCATCCGCATACCCCAATTCCACTCACATTACAAGGTCATGATCCGAGAGGTGGTCCGCCGCCACCTACACATCAAATGCCACCCCAGCCATTGCAATCGAGCACAGTGCGCACGCCGTCGCCAGCACAGCAACCGCAGTCGCGTAGTTTGCACGAGGAGCGCATGAATATCAATAGTGGCACACCGACTGGACCGCCACGTGAACCACCAACATCGCAAGCATCGATGCCACCCCAACAGTCACCGCATGCACACCGCAGTTCTCCTTTAACTGGTATGCCAGGAAATCCACCACCAGGTCTCATTGGTCATCCTATGCCCATACATCCACATTTAGCGCATTTGCCCCCTGGTCATCCAGCACACGCTGCTGTCGCTGGCGTTGGCCATCCGGGACATCCAATGTTATCGCACTCAATGGCCGGTTTGGGTCCGGGAGGTGGTGGCCCAATCGCTCTATTGGCTGGGCCACCATCGTTGACTGGCATGCCAGAGTCGGCACTCAGTAGACGCACACCGCCATCACATATTGCACCACCGCATTCCTCGTCTGCACCGCCACATTCATCTGTTTCTGGTAGTTTGTCTTCTACCACAACGTCAGTCAGCACTGCAACAAGCACGAATACTGTGCCATCATCTGCCTTTAGTCGCGCTAGCCCGAGCGTGCAGGGACCTAACTCCAACATTGGTGGACCTCAAAGCATCGGCGGCGGTGGTAGTGCTGGATTGCCTGGAAATAGCGGTACACCTGGTTCAAACGCTGCGCATCGATCAACATCGCCTGCTTCAAGTGTTAGCAGCTTGAGTCGTCAGAGTCCGCTACATCCGGTACCGCAAAGTCCACTCAGCCATCATCCGTCGTCATCGGCACTATCGGCGGCGGCTGCCGCAGTAGCAGAGCGAGATCGTCATGCACTCTTACGACAGCAATCACCGCACATGACACCTCCACCAGTATCCAGCGCTTCCACGTTGATGGCCAGTCCATTGAGCAAAATGTACTGCCCTCAACCGAATCAACGCGTACTGGGCACTTCACCGCCACCGCATTTAAGGCCTGGCGCTTCACCGCCTGTCATCCGACACCCACAAATGCCACTGCCATTGCCATTAATTCCGACAGGCGCTGGTATACCGCAAATAGCCGTACATCCCGGTCAGTCGCCATATCCCCATCCACTTTTACATCCCTCAATGTTCTACTCCCCGCATCATCACAATCCCTTCAATTATGGCTACGGACCATACGGACCTGGTTTCCCCACAGCCTACATGAAACCACCACCCCCTGGTGGACCACTTGACCCAGCTTCGGTGCTAGGTGGACATCATCCTGGTCTACCGGGACCGCCGCCCACACGTCCCGACGATCCAGCAATGGCAGCtgcagcagcggcggcggccGAAAAACAAGCAGTAGCTGCTCACCAgttaaaacaacagcaacaacatcatcagcatcaacaacaacaagcggcaGCACAAGCGCAAGCTCAGGCTCAAGCTCAAGCACAGGCACAAGCGCAAGCGCAGGCGCAGGCACAGGCACAGAACAAACCCCCAACACCAAAGACGCCGCAGGGCAGCAATAGCAGTGGCGGTCCGCCGGGCAGTTCACATTCGGCCCCTACTGGTCTGCCACCAGCTGGTTATCCAGGAGGGCATTTAGCCGGTTATCCACCACCGCCGCACTCCTCGCCATTCCAAGATGGTCAGCCAATGGGTATGAAGCCAACGTCGCACATGGATGCGCTGCGAGCGCACGCACACTCGGCTAATCTGGGCGGCCCACATCACCCGACGGAACCATTACCGATTGACATCGAGCCCGATCCAGAGCCAGAAATTCCAAGCCCAACGCAAAATATACCGCGTGGTCCTAGTCCCGAAGCCAAACCTGACGACACCGAATGCCATCGCTCGCAGTCCGCTATctTTGTGCGTCACATCGATCGTGGTGATTATAACTCCTGCACGCGTACGGATTTGATTTTCAAGCCTGTGGCAGACTCGAAACTCGCGAGAAAGCGTGAAGAGCGCGACAGAAAGCTAGCCGAAAAGGAGCGTGAGCGGCGTCAGcaacaacagcaacagcaacaacagcagcagcaacaggcTGTCGCAGCACAACAGGCAGCCCAACAGGCCAAATTGAAGGCCGAACTCAAACCGCCATATGCGGATACGCCAGCACTGCGTCAGCTATCCGAGTACGCCAGGCCACATGTGGCTTTCAGCCCTGTTGAACAGATGGTACCATATCATCACCCAATGGGGCCAATGTATAGTAGAGAGAGggAATTGGAAGAGATAAAGAACGCACAAGCGGCCGCCGCCAGTCAGTCGCGCATGGATCCGCATTGGATGGAATACTACAGACGTGGCATACATCCATCACAGTTCCCGCTGTACGCCAATCCTGCGGCTATTTCACAAATGGAGCGCGAGCGTTTGGGCATACCGCCGCCACATCATGTTGGCCTGGATCCCGGCGAGCATatgatacGATTGACGAGAGAATATCATGCACACTCTCATACTCATTTACATTTGCCTTTGCCTTCACAGCCGCAACCACCGGAGGCCGGATTTCAACTGCCACCGAATGTTGGCCAGTATCCACGGCCAAGTATGCTTATGCCTAGAGAACCGGATGTTTTGCTGCGCATGTCCTACGCCGATCAGCTTCAGTATTTGCAGGCTGCGGAATTTCAGCGACAGTCACTGCACGAGCAGTACTTTAGACAACGGCCCAGATAA
Protein Sequence
MAASTQGEIRVGPGHQVNDVYAKLPDYNPISSFPVDKESDERELEESRWSPGIVADGDLLMFLRAARSMAAFQGMCDGGLEDGCLAASRDDTTINALDILHDSGYDPGKALQALVKCPVSKGIDKKWTEDETKKFIKGLRQFGKNFFRIHKDLLPHKETPELVEFYYLWKKTPGANNNRPHRRRRQSALRRNRVTRASNTPPKKEDTPEPQTATTASAAADSTRSSPVVSKEENSSLTEDDISECDSDSSLTNKRDESPSRMRTRNKQQQQQQQNNNTKDQVANGKRPKRGTETPDTVTAADSPKTPTKGANANAENNTTTTVAANKRKGGKQDTPNKKKRTDVDGSAGSGSGGGSGDVTDDGSSLSKDSGKRKRPDSPAEESMNSDSRPDSVMDDAESNTTDTVEQSLKEGKDSSAGKEDSGAADGDSKADIIEKSEKPAEDTKETIKNDDEETNIQAPVSGQAPVAPPTSDAGSVATKEPISNANEENMSVVSAPPTPMKVPTIATVEALNASIGRGELSTERKDTVEKMDVSESNSVAVDIAKEQEMMKKIANMKQESMQQQQQQQQQLPPNNTNVNMQETAVFIKKEPLDDSMDATCNQNSNEPQDLKVKVEIKNEECKNNVGMPPTSMSSAVNDSGGGPEAPPQPPHMHMHLPPTGVQPPPGYILDGQLKYGPPPPQSMPSNDNNAPPPSGMPLGGPPPTHKYPGDMEMKYNESAAAAAAAVAGIKYEGGKFAMQDIKYPPPPLEHAMKYGTVQDMQAAAAAAAAAAAAAAGKYDMKFALEQPGKYPGDLSAHQQPPKGFPGEQLKLPEMKASSIYNMPNAESKYAPAASQPGDVGGLKYVGPGVPQDPQPPPTHGAPPGATPPPGIAMPKPHYQHEVQHPLARSAFESSLMLKYGDPMSAKYGPPQDLKYPPPPQGSNDGGPMKPSPYAENLVKGSPYGTQEPGGMKYPPSESPIDASSRSTPGQDSQGSNSSSQPSSQQQQFQSPHPSPHLPSPAGGGLPPGMHPQNLVSPHGPPSHGQLNSGMPPGASGPPPPSSMHHPHLTPSPNNSQQLQGPHPQSSVASSMPPSSVGAPPPLSTVAPSGLHPQHLPPSHLQQLHRQHPDMPAGMHPHTPIPLTLQGHDPRGGPPPPTHQMPPQPLQSSTVRTPSPAQQPQSRSLHEERMNINSGTPTGPPREPPTSQASMPPQQSPHAHRSSPLTGMPGNPPPGLIGHPMPIHPHLAHLPPGHPAHAAVAGVGHPGHPMLSHSMAGLGPGGGGPIALLAGPPSLTGMPESALSRRTPPSHIAPPHSSSAPPHSSVSGSLSSTTTSVSTATSTNTVPSSAFSRASPSVQGPNSNIGGPQSIGGGGSAGLPGNSGTPGSNAAHRSTSPASSVSSLSRQSPLHPVPQSPLSHHPSSSALSAAAAAVAERDRHALLRQQSPHMTPPPVSSASTLMASPLSKMYCPQPNQRVLGTSPPPHLRPGASPPVIRHPQMPLPLPLIPTGAGIPQIAVHPGQSPYPHPLLHPSMFYSPHHHNPFNYGYGPYGPGFPTAYMKPPPPGGPLDPASVLGGHHPGLPGPPPTRPDDPAMAAAAAAAAEKQAVAAHQLKQQQQHHQHQQQQAAAQAQAQAQAQAQAQAQAQAQAQAQNKPPTPKTPQGSNSSGGPPGSSHSAPTGLPPAGYPGGHLAGYPPPPHSSPFQDGQPMGMKPTSHMDALRAHAHSANLGGPHHPTEPLPIDIEPDPEPEIPSPTQNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVADSKLARKREERDRKLAEKERERRQQQQQQQQQQQQQAVAAQQAAQQAKLKAELKPPYADTPALRQLSEYARPHVAFSPVEQMVPYHHPMGPMYSRERELEEIKNAQAAAASQSRMDPHWMEYYRRGIHPSQFPLYANPAAISQMERERLGIPPPHHVGLDPGEHMIRLTREYHAHSHTHLHLPLPSQPQPPEAGFQLPPNVGQYPRPSMLMPREPDVLLRMSYADQLQYLQAAEFQRQSLHEQYFRQRPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00192029;
90% Identity
iTF_00190618;
80% Identity
-