Basic Information

Gene Symbol
-
Assembly
GCA_016617805.2
Location
NC:69432593-69433745[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5 2.1e+03 -1.4 0.0 26 41 11 28 9 28 0.80
2 2 8.3e-09 6.8e-06 25.7 2.1 6 45 31 86 30 87 0.83

Sequence Information

Coding Sequence
ATGGATTCAAACACTTGTAGGATGAAGCAGCTTTCTAAACATTATAAGCCTTATGGAAGAGCACGTACGGATATAAAGAACAAAAAGACTTTAAAAGAAGATAAAAAGTTATGTAATTTGGTGGAGCAGCATCCGCAGCTGTACGACGAAGGACACAAGGGTTACGGTCAGAAAAAGGCTACAGATGAGGCATGGCGCACGATTGCGGACTTGTTGGGGAAGTCAGTGTCTCAATGCAAGGCTCGTTGGGAAAAACTGCGTGCTGAGTACATCGCATATCTACGTGCCGTAGAGGCCGACAAGAAACAGCGTGGTCGTAAAGGTCAATGTAAAGAAATCTCGGTTGCCGCAGAAAATAAAGACCTCcgcaataaacaattttttgaaagtctacGATGCTACATGCAAGATATGACCCAAAGAGAGCAGAGTCTATGCCACATTAGCGTGTTGCAAGTTGTACACGAAATCAGCGGAATGAAAAGTAGTGCAAGCGGGGATGGCAATGATTACATGCAAAATGAGATAAAGTATCTAGTGGACAAAATAGACGAACAAGGACTCCGTACTTTGCAGGAAAACATTCAGAAAAGAATGAATAAATGTAATAACGCAGACATGTTCTCTACATCAAAACCGCAGCTGGTAAATGACGAAGTTACCATTAAGAATTAA
Protein Sequence
MDSNTCRMKQLSKHYKPYGRARTDIKNKKTLKEDKKLCNLVEQHPQLYDEGHKGYGQKKATDEAWRTIADLLGKSVSQCKARWEKLRAEYIAYLRAVEADKKQRGRKGQCKEISVAAENKDLRNKQFFESLRCYMQDMTQREQSLCHISVLQVVHEISGMKSSASGDGNDYMQNEIKYLVDKIDEQGLRTLQENIQKRMNKCNNADMFSTSKPQLVNDEVTIKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00189895;
90% Identity
-
80% Identity
-