Basic Information

Gene Symbol
grh
Assembly
GCA_016617805.2
Location
NC:5355623-5611075[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-63 4.7e-59 199.0 0.2 26 221 815 1005 801 1007 0.94

Sequence Information

Coding Sequence
ATGTCCGCATCGCCTGCCACTACTAGTGTCATCACTTCGAACGAACTTGCCATACAACAACAGCTTCAACACcagcagcatcaacaccaacaacaacttcaaACGCACAGCTCTCCGACGCGCGTCTCACTACCACCCGGTGTTACTGTGACCAACGTTGTGACCACAACGTCTGCAGCCGCTGCCGCCAACGCCAACGGTTTAACACTAATGCATCGCTCGCCCGACAGTCCACAGCCCGAGTTGGCCACCATGACAAATGTCAATGTGCTCGATCTACATACAGACTCGTCGAAACTCTACGACAAGGACGCGGTCTTTATTTACGAAAGCCCCAAGGTGGTCTTGCCGACAGTGGGCTCCGGTGCGACAGTCACCAGTGATGAGCATGTGATTGATGCACGCATGGTCGCCCAATTGAACGAACAGCAAGCAGCTGTTGcagcggctgctgctgctgcagctgcaGCCAACGATAATCAGCCGTTGGCCAAGATCGAATTCGATGAAAATCAGATAATTCGCGTTGTCGGCCCGAATGGTGAGCAACAACAAATCATTTCACGTGAAATAGTCAACGGCGAACATCACATACTGTCACGTAATGAAGCTGGCGAACACATACTCACACGCATCGTAAGCGATCCGACCAAATTGATGCCCAGCGATAATGCGGTCGCCGCCGCAATGTTCAATCAGGCACAGAAAATGGCCAACGATCATGGTGTGTATCAGACATCGCCATTGGATGCCTCAATGCTGCAGCATTACGAGCCAGAGAATGTCGTTAAGGCAGAGGTGGATATATATGATGATCCGAAGAAACCGCCGGGCAGCGGTGGTGGTGGTCAGCAAATACTCTATACAACAACTGGTCCGGACACTGGGAAGCAACTATCACATTTGCCTGTTGCCACGAAGCTGGAGTCGGAAATGTATCCGACAGACAAACATATCGATTTAATCTACAATGATGGCAATAAAACCGTTATATACACCACCACAACCGATCAAAAGGGTTTGGAAATATATTCGGGCAGTGACTTGAGTGGCCTGGTTGCTGATGGGCAGGTGGTGGTGCAAGGTGGATTGCAGTATGCCGGCGCTGGCACAGCTGGTGGACAACCGGTCTATATAGTATCCGATGGTAGCTTGCCGCCGGGCGTCGAAGGACATTTGCAAAGCACACCAACGGGCGGCAACAACAAATTGAATGGGCAAACCACACCTCTGGACGTGTCCGGCCTATCGCAAAATGAATTCCAAGGCCTGCTGCTTGGTTCACACCCATCGGCGGCCGGTGGCAACGGCAACGCATCCACAACACCAACAACCATCTCACAGCACTCGGCCATTGTGGCAGCGGCCACCGCCGCAGCAGCGGCAGCTGGTGGCGCCACAGCTGTAGTGGTCACCGCCGAGCAGCAGCGCCAACAACAGGCCCAACAGACGATCAGCATCAAACGCGAACCGGAAGATCTGCGCAAGGAGCCGAAAAGCGGCGTCAGCAGCACCATCGTCGATGCGACGAACAGCATCACCAATGGTGGCGTGATAAGCGGCACCGCACATCACCAGCAACACGGCGGAACGAAGGTTTTAGTTGTGCAGTCACCGACATCACCAACACAAACGACCATACAAATTAAAGAACCGCCCATTAGTCCTGGAAGTCCAACAACTGACACAATGTACGCTGCCAGTGGCGGCACACAAATCTACTTGCAGGGCGCTCATCAGTCCAATGCACCCGGTTCCGCTGGCGTTCCGAATAATGTGAATGTCAACGCACAGACACCCAGTCCCGGTCCCTACATCACACCCGACGGTTATGGCATGTACACCACCACACGCCTCACCTCGGGCGGACCGACATCAACCTTCATTACAGAGCCTTATTACCGCGAATTCTATACCACAGCCACCACGGCCGACACACAGACTGGCTATGGACAGGCGCCACGTAATATCGTGTATGGCGGTGCTGAGAGCGAGCCACCACATCCGGGCACCACGTATGAGGGGCGCTTCACCACGTCCGCAGCACCCGTGACCAGCATGCCATCGCACACCACAGCCAATACGGGGGGAATGAAGAACGGTACACCGGTGTATGCTAAGACCATCACAGCTGCTGGACTGACGGTGGATTTGCCGAGTCCGGATTCGGGTATTGGCGCTGATGCGATAACACCAAGGGATCAGAATAATATACACCAGTCTTTCGACTATACAGAGCTTTCTGGCACATTATTGGACAGCAATGGCGGCATTCCAGTCTCGGTGAATAGCATACAACGCGGCGCCGTGAGCGTTCATGGACAAAATAGCCCGACCACATCGTTGGGCGGCTCGACGCCGAATGGCGCCACACGCTCGAGGCCATGGCATGATTTTGGACGACAAAATGATGCGGATAAAAtacaaataccaaaaatCTTCTGCAATGTCGGCTTCCGCTACCATCTGGAGAGTCCAATCAGTTCATCACAGCGACGCGAAGATGATCGCATCACATACATCAACAAAGGACAATTCTACGGCATCACATTGGAGTATGTGCCCGATCCAGATAAGCCCATCAAGAACACAACTGTCAAGAGCGTTATTATGCTGATATTCCGTGAAGAGAAGAGCCCCGATGATGAAATCAAAGCTTGGCAATTCTGGCACAGTCGGCAGCATTCGGTTAAACAGCGCATTTTAGATGCAGATACGAAAAATTCCGTCGGCCTAGTTGGTTGCATCGAGGAGGTCTCCCACAATGCCATCGCTGTCTATTGGAATCCGCTGGAGAGCTCAGCCAAGATCAACATCGCCGTCCAGTGCCTGAGTACGGACTTCAGCAGCCAAAAGGGAGTTAAGGGTCTACCGTTGCACATTCAAATCGACACATTCGAAGATCCGCGCGATGCACAGGTCTTCCATCGAGGCTACTGCCAAATTAAGGTCTTCTGCGATAAGGGTGCTGAGCGCAAAACACGTGATGAGGAGCGACGCGCTGCTAAGCGTAAAATGACCGCCACAGGACGCAAGAAGCTCGATGAGCTGTATCATCCGGTCACCGAACGTTCGGAGTTCTATACAATGCAGGATTTGCAAAAGCCACCGGTACTATTCTCGCCCGCCGATGATATGGAAAAGAGCTTTTATGGCCATGAGACTGATTCACTGACCGGCGCACCAGATCTCAAAGGCACATCACCATTCTTGTTGCATGGCCAAAAAGTGGCGGCGCCAACACTCAAATTCCACAATCATTTTCCGCCCGACGTGCAGACCGACAAGAAGGACCACCTGCTGGATCAAGGTCTAGTACCCAGTGCCATGGGCGATTTTGTGCCACCAATGAAGCGCGGACGCATGACACCGCCCACCAGCGAACGCGTTATGCTGTTCGTGCGACAGGAGAACGAGGAAATCTACACGCCGCTGCATGTGGTGCCGCCCACCACTATTGGCCTCTTGAATGCGattgaaagtAAATACAAAATCTCAACAGCgagtataaataatatttatcgtACAAATAAGAAAGGGATTACTGCGAAAATTGATGACGACATGATTTCGTATTATTGCAATGAAGATATATTTCTGCTGGAAGTGCAACAGATCGAAGATGATTTATATGACATAACATTAACGGAGTTACCCAATCATTGA
Protein Sequence
MSASPATTSVITSNELAIQQQLQHQQHQHQQQLQTHSSPTRVSLPPGVTVTNVVTTTSAAAAANANGLTLMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKDAVFIYESPKVVLPTVGSGATVTSDEHVIDARMVAQLNEQQAAVAAAAAAAAAANDNQPLAKIEFDENQIIRVVGPNGEQQQIISREIVNGEHHILSRNEAGEHILTRIVSDPTKLMPSDNAVAAAMFNQAQKMANDHGVYQTSPLDASMLQHYEPENVVKAEVDIYDDPKKPPGSGGGGQQILYTTTGPDTGKQLSHLPVATKLESEMYPTDKHIDLIYNDGNKTVIYTTTTDQKGLEIYSGSDLSGLVADGQVVVQGGLQYAGAGTAGGQPVYIVSDGSLPPGVEGHLQSTPTGGNNKLNGQTTPLDVSGLSQNEFQGLLLGSHPSAAGGNGNASTTPTTISQHSAIVAAATAAAAAAGGATAVVVTAEQQRQQQAQQTISIKREPEDLRKEPKSGVSSTIVDATNSITNGGVISGTAHHQQHGGTKVLVVQSPTSPTQTTIQIKEPPISPGSPTTDTMYAASGGTQIYLQGAHQSNAPGSAGVPNNVNVNAQTPSPGPYITPDGYGMYTTTRLTSGGPTSTFITEPYYREFYTTATTADTQTGYGQAPRNIVYGGAESEPPHPGTTYEGRFTTSAAPVTSMPSHTTANTGGMKNGTPVYAKTITAAGLTVDLPSPDSGIGADAITPRDQNNIHQSFDYTELSGTLLDSNGGIPVSVNSIQRGAVSVHGQNSPTTSLGGSTPNGATRSRPWHDFGRQNDADKIQIPKIFCNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVPDPDKPIKNTTVKSVIMLIFREEKSPDDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDAQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTERSEFYTMQDLQKPPVLFSPADDMEKSFYGHETDSLTGAPDLKGTSPFLLHGQKVAAPTLKFHNHFPPDVQTDKKDHLLDQGLVPSAMGDFVPPMKRGRMTPPTSERVMLFVRQENEEIYTPLHVVPPTTIGLLNAIESKYKISTASINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQIEDDLYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00190454;
90% Identity
iTF_00190454;
80% Identity
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