Basic Information

Insect: Bactrocera oleae
Gene Symbol: -
Assembly: GCA_001188975.4
Location: LGAM02035380.1:889134-894796[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5 4.3e+02 1.9 0.4 1 10 195 204 195 218 0.81

2 7 0.00045 0.039 14.6 0.2 1 23 226 249 226 249 0.96

3 7 0.00018 0.015 15.9 0.6 1 23 258 281 258 281 0.94

4 7 0.00012 0.01 16.4 1.3 1 23 286 311 286 311 0.97

5 7 0.27 23 5.9 1.8 1 23 319 342 319 342 0.88

6 7 0.00028 0.024 15.3 0.2 2 21 348 367 347 368 0.93

7 7 2.4e-06 0.00021 21.8 0.6 2 23 377 399 376 399 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5	4.3e+02	1.9	0.4	1	10	195	204	195	218	0.81
2	7	0.00045	0.039	14.6	0.2	1	23	226	249	226	249	0.96
3	7	0.00018	0.015	15.9	0.6	1	23	258	281	258	281	0.94
4	7	0.00012	0.01	16.4	1.3	1	23	286	311	286	311	0.97
5	7	0.27	23	5.9	1.8	1	23	319	342	319	342	0.88
6	7	0.00028	0.024	15.3	0.2	2	21	348	367	347	368	0.93
7	7	2.4e-06	0.00021	21.8	0.6	2	23	377	399	376	399	0.95

Sequence Information

Coding Sequence: ATGAAGAGTTTTATAAACACGCGCGTATTCAACAAAAACTCAACCGTATTCATTCGATGTCCGACAAGAACTGAAGTTGTAGAACAGGAACATGAACGGCTAACCAGGCAGCCAGGCAGCAATGAACACCCAAACGCAACCACCCAGTTACCATTCGGCATCTATCCTATAGGAGTTTCAAAAAAGCTTGAGCCAGAGGCAACCATTTGCCGTCGCTGCGCTGCATCGATATTGGTTGCTGAAAACATTATATTGCGATGCCAAGAGTCAGAAGAATATCTCCAGTTTCGTCGTTTAAAGGAAAGTTGCTTACCCAGGCAATCGCCAACTGCGAAGACAGAAAGCTTTAACGTAAGAAGCTATGGAAAATATCAGTCTGCTTCGACCTGCAGTGATTTGGAAGAAGCATTACCATTGGAACCAAATGGTGGGCATATGTTACAATCTGTCAAAGaacttcatataataaaaaatgatgtGAATACTTTTAAACGGCTTGGAGACGACCAAAGTCAGTTCTCAAATAATTACGAACCAGCAATAAAACGTTTGAAGAGTAAAGAAGTTACATCAGTGTCCATCTTTTATTGCGATCAATGTGACTATAACACCAAGATAGGTAAACGTATTATAGAACACAAACAAATTGAGCATGGAGTGTACGATCCAAATATCTATACCTGCAGTATTTGTTCTGAAAGCTTTTCTTGGAAACCAACACTGTATAGACATATAGAGATAGACCACAAAATACTTCCtgcagataaaaaatatttatgtaatgaaTGCGGTCGTGCCTACATGCGAGAAGTGCACTTGTTAGAACATATAAAGCAGCGACATGGACCTCGTAGTTTCAAATGTCCTGATCCACTATGTGAGCAATCATTCACTCGAACGTTCACTCTTAGACGTCATTTCATCACTACACATACTGAACAAACAAGCTCTCGTTATCATTGCATATATTGTGATAAATACTTTAAGGTTTATGATCAATGGAAATACCATAATGAAGTTATTCACAAAAATGAAACTGTATATTGCCCACATTGTGGCTATCCTTTTCGCTTCAAAGAAAAGCTAgatgaacatattttgaaggatATTTGCAAACGTAGTATTGTGCCCTGCTCTTATTGCCAAAGACGCTTCACAACAAAGTCTGGTCTGAGAGAGCACGTGCGGAATATACACAACATCTACTAG
Protein Sequence: MKSFINTRVFNKNSTVFIRCPTRTEVVEQEHERLTRQPGSNEHPNATTQLPFGIYPIGVSKKLEPEATICRRCAASILVAENIILRCQESEEYLQFRRLKESCLPRQSPTAKTESFNVRSYGKYQSASTCSDLEEALPLEPNGGHMLQSVKELHIIKNDVNTFKRLGDDQSQFSNNYEPAIKRLKSKEVTSVSIFYCDQCDYNTKIGKRIIEHKQIEHGVYDPNIYTCSICSESFSWKPTLYRHIEIDHKILPADKKYLCNECGRAYMREVHLLEHIKQRHGPRSFKCPDPLCEQSFTRTFTLRRHFITTHTEQTSSRYHCIYCDKYFKVYDQWKYHNEVIHKNETVYCPHCGYPFRFKEKLDEHILKDICKRSIVPCSYCQRRFTTKSGLREHVRNIHNIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193886;
90% Identity: -
80% Identity: -