Basic Information

Insect: Bactrocera oleae
Gene Symbol: salm
Assembly: GCA_001188975.4
Location: LGAM02023434.1:415990-424338[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5e-06 0.00043 20.8 0.9 1 23 626 648 626 648 0.98

2 7 9.9e-06 0.00085 19.8 2.1 1 23 654 676 654 676 0.98

3 7 0.017 1.4 9.7 1.5 2 23 1041 1062 1040 1062 0.98

4 7 7e-08 6.1e-06 26.6 0.5 1 23 1068 1090 1068 1090 0.98

5 7 0.00022 0.019 15.6 2.3 1 23 1100 1122 1100 1122 0.98

6 7 0.036 3.1 8.6 3.1 2 23 1568 1589 1567 1589 0.97

7 7 3.7e-08 3.2e-06 27.5 1.4 1 23 1595 1617 1595 1617 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5e-06	0.00043	20.8	0.9	1	23	626	648	626	648	0.98
2	7	9.9e-06	0.00085	19.8	2.1	1	23	654	676	654	676	0.98
3	7	0.017	1.4	9.7	1.5	2	23	1041	1062	1040	1062	0.98
4	7	7e-08	6.1e-06	26.6	0.5	1	23	1068	1090	1068	1090	0.98
5	7	0.00022	0.019	15.6	2.3	1	23	1100	1122	1100	1122	0.98
6	7	0.036	3.1	8.6	3.1	2	23	1568	1589	1567	1589	0.97
7	7	3.7e-08	3.2e-06	27.5	1.4	1	23	1595	1617	1595	1617	0.99

Sequence Information

Coding Sequence: ATGGCGAAGCGCAAGTGGACAGGAAAGTCAGTTGCTTGTAATCGCTTTGTTAGCTGTTGGCTCGTGAAGCGATCAGCTAATGGTTTGGCAGCCACGGACGCGTTGTCAGTGGAGTCAAGAAGTCAAGCCGCCGGTAGTTGTGACGCGATGGCAAGCAGCGACTATGAGTCGAGCGATCAGGAGGAGAATGGTGCTTGCTGCTCGCCCATTGCCAGTCAAGACGTGGCGAGCAATACCGAAACGACAGCAACAAGTGCAGCAGTAGCGGCAACAACAGCATTGCCCACAGTTATGCTTGCAACGCCGACACATAGCGCAATTGGCAATGATTTGTCCGTTGCGGCACAAGTGCAAGATCGCACACAAAGCGCTGCGGATGCGCTTGAacaaagtacaacaacaatgagcgAGGCGACCGAAGATCACAATCACAACAACActagcaacagcaataatactATGATGTCCGGTGTATCACCAACGCGACTAGAACAAGCGCGCGTTGCAACACCCGTAGAGCGCCTACTACAATTAAAACAACTTACCGATGCGGCCGCGTCGGCGATGGTGGAAGCGAGCGCAGCGTCGGCAATTAGCGCTGCCAGTACACcaacatacaatacatatccGCTAGATAGCGCTGGTGTTTTGgctaacaataataaatttgatgcGCCTACACCTATGGAAACGGAGGAGATGGAGGAAAGTACGCTTTATGCATCGGCTGGTACGATGACAAAGCAGCGCACCACACTAATAGAGGTAGATAATAAGGAAGTAGAAGTGGATGGTGAAGATGAAGATCAGCAAACTGCCGAAGAGTTGGCTGTAAAGCAACGCGCCATGGAATTAGCGTCAGCTAGCGCAGCGCTCACAAATCCCAACAGCATGGATGTTAGTAATGGCGCGGCCGCAAGCGAAGCAGATGACATTGCGAAGAGCACTGCTACAACGCTTACGCCCACTGCGAGCGCGCTTGCCGCCGCAGCCGGTTTGCCACAAGCTGCTGCCGCGGCCGCATTCGGCGCTGCGCCGGTCAATCTGGAAGCCatacaaaatatgcaaatggCTATCGCGCAATTTGCGGCCAAGACGATAGCGAATGGCGCACAGGGCGGTGATAATGATGCGGCAATGAAACAGTTGGCTTTCCTGCAGCAAGCGTTGTTCaatttgcagcaacaacaactcttTCAAATACAACTCATTCAACAATTGCAGTCACAATTGGCGATGAATCAGCCGAAAGCTGCAAGTGATGGTGAAGTGGTTGACGGCGATGAGTTGGAGGAAGAGCGTGAAGATGGCGAGGAAGATACATATGAAGAGGAGGAACGTATTGCGGAAATGGAATTGCGCCAGAAGGCGGAGGCGCGCATGGCCGAGGCTAAAGCGCGTCAACATCTCATCAATGCTGGTGTGCCGTTGCGCGATGAAGCAGCCACCACCGAGCAGGCAAATAGTTCAGCTAATACTAGCGGCAACGTGCTAAACGCTACAGAGTCACTCAAGCGAAAGCGCGAAGATGACACTGATGCTTTTGACGCTGTGGCCAGCAGACGCATAAGCATTGAGGCGGCACATCTCAGCGCTGCACGCGCGACTGAACAAATACCCACCGGTATGGATGCATTGAGCAAGCTGAAGGAAATGGAAAATATGCCACTGCCCTACGGTACTGATCTCGGCTCGAGCATAATTACCAATCACGATGATCTGCCCGAGCCCAATTCGCTGGAGATGCTGCAGAAGCGCGCGCAAGAGGTGCTAGACTCCGCCTCGCAGGGCATACTTGCCAACAATATGGCTGATGACTTTGCCTTTAGGGATAAAAACGGTGATAGCAAGAATCGGAATGAACCGTTCTTCAAGCATCGCTGCCGCTACTGTGGCAAGGTGTTCGGCTCCGATTCAGCgctacaaatacacatacgcTCACATACCGGTGAGCGGCCATTCAAGTGTAATGTCTGCGGCAGTCGTTTCACCACCAAAGGTAATCTGAAGGTGCACTTTCAGCGGCACGCGCACAAGTTCCCGCATGTGCCAATGAATGCTACGCCAATACCCGAGCACTTGGACAAATTTCATCCACCGCTGTTGGACCAGATGTCGCCGGATAGCTCGCCCTCACACACACCGTCTGCGCTGCCACAGCAAATGCCACAACAACAGATGCCGCCAGTGTCGTTGCCGCTACCCTTCCCACCAAGCGCCGCTTTTTCTCACTTATCCGGACTGTATCGGCCGCCAATGGAGCTGTTGAAGTCATTAGGTAACGCCGGCTTTCCAAATCCGTTCTTTCCCCAATTGTCCACTGCCGTAAGTGAGTCACGCGCTGAAGCGCCTACGGCACAGACTGCACCCAAAGAGCATAATCAAGACTTGCCTACTGATTTGCGTAAGTCATCGGCATCGAACTCACCGGAGTTGACAGTGAAGACTGAAGTCACGgaggaaaaagaagaagaagaaacagTCAAACAAACGACGACGGTGGCGTCTACTGCAGAAACCACGGTAGTTGTAGCTGCAACGGAGGACGTAACACCAACactgggtataaaaattaaagaagaaagGATCGACACGGATTCACAAGATGAACAGTTGGAACGTGCAGCAACACCAAACGCACAGTTGACACCATCACCTGCGCGTGTAAATGCTTCAACGCCAACAAAAACGTCCGCCAGCGCGCCTTTCACACCACCAACACCCACCTCAAAGTCGTTGGCAATGCCACCGGTTGTGCAGCCAGCGCAGCCGCCTATTACTATGCATCCGCATCCCTCATCCGGCTTGAATAATCATTTCGATCATCTACCCACACCAGGACAGCTGCCGCCATCTTTGCATCATCGCGACGACTTCTTTGCGGAACGTTTTTCGctgaattttactaaaaatctcTCACCTGAACATCACTCGCCCATACGCTCGCCTGCGCATCTGCAGCGCTCGCCATTCTTTAATCCAATCAAACATGAGATGGCGCTGCTGCCACGCCCACACAGCAATGACAACTCGTGGGAGAATTTCATAGAAGTTTCGAATACTTCGGAGACTCTGAAATTGAAGGAACTAATGAAGAACAAGAAATTGACTGACCCAAACCAATGCGTCGTGTGTGATCGTGTGCTGTCATGTAAGAGCGCTTTGCAAATGCATTACCGCACACATACTGGCGAACGGCCCTTCAAGTGTCGTATTTGTGGACGCGCCTTCACTACAAAAGGTAATCTAAAGACTCACATGGCTGTGCATAAGATTCGGCCACCCATGCGCAACTTCCACCAATGTCCTGTTTGTCATAAGAAGTACTCGAACGCGCTGGTGCTGCAGCAGCACATACGTCTGCATACCGGTGAGCCAACCGATTTGACACCCGAACAGATACAAGCTGCTGAAATACGTGATCCACCGCCATCGATGATGCCGGGCGCGTTTATGAATCCCTTCGCAGCAGCGGCCTTTCACTTCGGTGCCATGCCTGGCGCCGGCGCTGCCATGGGTCATTTAGGACCACACAACGGACTCGGTTCGGAGTCTTCGCAAGGTGATATGGATGAAAATATCGATTGCGGCGATGACTATGACGATGACATGTCGTCCGAACACATGTCCAGCGCGCATGACTTGGATGTGAGCGATCGGCCGCATTCTAGCGATGACTTCAAAGGTCTACTCTTCGAGCAGAAGCTACGTATCGATGCTACCGGTGTCGTGAATACCACACCACGTCCGCATTCAACCGCCAGCAATGCGAATTCCGTAAACTCAGCGCCAACCAGTCCCAACTCTGCGCCGCGCCACAGTTCCACGCGTAACAGTTCACCCGCGCGCTCCATGTCTGAGGCCTCGCAAGGCGCACTCGATCTCACACCGCGCGCCATGCCAACGCACGCCAAAAGTAGCTCCCACTCACCAGCACCGACGGCGACACTGTCTGCAAGTGGTCACAAATCGCCCACATCACCGTCGCAGCGCAACAGTAGCGCCAATAGTAGCGTCACTAGAAGTCCAAATCCAACGTCCACACAAAAGCCACAAACGAGTCCTGCTGCTACGCTCACCTCACCATTGGTGCCAACGTCAGCAGTCGATTGTCTGCCACCAGTGTTGCATCATCACCTGCAACAGCAGCATCAACAGCTAATGCAACAACAAGCAGTCGCGGCGGCAGCAGCGCACGCTCAAGCGCAAGCGCAACATCATCATCAGCAATTGCAACAGCATGCCGTCGCTATGCATGCCGAGCAATTGCGTCGCGAACATCAAATAAAACAGGAACATGCGGCACATCAGCATCACTTACGCCAACACCACcaccagcagcagcaacaacaacagcaagacaCGCATGCATCGGCGCATTCACCGCATCAGCTGCCATTGCCACCGTCGCCACATCTGGCGCATCACCTGCAACAGCAACACCAGCAagcagcggcggcggcagcagcagctgcagcagcgcaacaacaacaaccaaccgGTGCTATGCCACCACAAGGACCACAACCACCCAATCCATTGGTTGCTGCGCGCCCGCCGTTTGGCATGTTTCCGAATTTGCCGCTTTTCCCGCCGGCCACAGCGCAAACGATGTGCTCCGCTATGAATACGATTGCGCAATCGGTAATGCCGGCGGCACCGTTCAATCCACTTGCACTTTCCGGCGTGCGAGGAAGCACCACCTGCGGCATCTGTTTCAAAACATTCCCCTGTCATTCAGCTCTAGAAATACACTATCGCAGCCACACCAAGGAGCGACCATTCAAGTGTACCATCTGTGATCGCGGTTTTACCACAAAGGGCAACCTCAAACAACATATGCTGACACATAAAATACGGGATATGGAGCAGGAAACCTTTCGGAATCGTGCCGTAAAGTATATGAGTGGCTGCAAAGACGGCTACGAGTAG
Protein Sequence: MAKRKWTGKSVACNRFVSCWLVKRSANGLAATDALSVESRSQAAGSCDAMASSDYESSDQEENGACCSPIASQDVASNTETTATSAAVAATTALPTVMLATPTHSAIGNDLSVAAQVQDRTQSAADALEQSTTTMSEATEDHNHNNTSNSNNTMMSGVSPTRLEQARVATPVERLLQLKQLTDAAASAMVEASAASAISAASTPTYNTYPLDSAGVLANNNKFDAPTPMETEEMEESTLYASAGTMTKQRTTLIEVDNKEVEVDGEDEDQQTAEELAVKQRAMELASASAALTNPNSMDVSNGAAASEADDIAKSTATTLTPTASALAAAAGLPQAAAAAAFGAAPVNLEAIQNMQMAIAQFAAKTIANGAQGGDNDAAMKQLAFLQQALFNLQQQQLFQIQLIQQLQSQLAMNQPKAASDGEVVDGDELEEEREDGEEDTYEEEERIAEMELRQKAEARMAEAKARQHLINAGVPLRDEAATTEQANSSANTSGNVLNATESLKRKREDDTDAFDAVASRRISIEAAHLSAARATEQIPTGMDALSKLKEMENMPLPYGTDLGSSIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADDFAFRDKNGDSKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPSALPQQMPQQQMPPVSLPLPFPPSAAFSHLSGLYRPPMELLKSLGNAGFPNPFFPQLSTAVSESRAEAPTAQTAPKEHNQDLPTDLRKSSASNSPELTVKTEVTEEKEEEETVKQTTTVASTAETTVVVAATEDVTPTLGIKIKEERIDTDSQDEQLERAATPNAQLTPSPARVNASTPTKTSASAPFTPPTPTSKSLAMPPVVQPAQPPITMHPHPSSGLNNHFDHLPTPGQLPPSLHHRDDFFAERFSLNFTKNLSPEHHSPIRSPAHLQRSPFFNPIKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKLTDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGAMPGAGAAMGHLGPHNGLGSESSQGDMDENIDCGDDYDDDMSSEHMSSAHDLDVSDRPHSSDDFKGLLFEQKLRIDATGVVNTTPRPHSTASNANSVNSAPTSPNSAPRHSSTRNSSPARSMSEASQGALDLTPRAMPTHAKSSSHSPAPTATLSASGHKSPTSPSQRNSSANSSVTRSPNPTSTQKPQTSPAATLTSPLVPTSAVDCLPPVLHHHLQQQHQQLMQQQAVAAAAAHAQAQAQHHHQQLQQHAVAMHAEQLRREHQIKQEHAAHQHHLRQHHHQQQQQQQQDTHASAHSPHQLPLPPSPHLAHHLQQQHQQAAAAAAAAAAAQQQQPTGAMPPQGPQPPNPLVAARPPFGMFPNLPLFPPATAQTMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCTICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGCKDGYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01564050;
90% Identity: iTF_00193847;
80% Identity: -