Basic Information

Insect: Bactrocera oleae
Gene Symbol: CMR3
Assembly: GCA_001188975.4
Location: LGAM02016867.1:5692263-5693871[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.11 9.4 7.1 1.7 1 23 221 243 221 243 0.97

2 9 5.1e-06 0.00044 20.7 0.4 1 23 249 273 249 273 0.97

3 9 0.0001 0.0089 16.6 1.1 1 23 280 305 280 305 0.95

4 9 2.8e-05 0.0024 18.4 3.4 1 23 314 336 314 336 0.96

5 9 0.00078 0.067 13.9 0.7 1 23 344 368 344 368 0.94

6 9 0.0058 0.5 11.1 1.8 1 23 374 396 374 396 0.98

7 9 0.0015 0.13 13.0 3.1 2 23 403 425 402 425 0.96

8 9 0.0018 0.16 12.7 1.1 1 23 431 453 431 453 0.97

9 9 8.6e-05 0.0074 16.9 0.3 2 23 460 481 460 481 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.11	9.4	7.1	1.7	1	23	221	243	221	243	0.97
2	9	5.1e-06	0.00044	20.7	0.4	1	23	249	273	249	273	0.97
3	9	0.0001	0.0089	16.6	1.1	1	23	280	305	280	305	0.95
4	9	2.8e-05	0.0024	18.4	3.4	1	23	314	336	314	336	0.96
5	9	0.00078	0.067	13.9	0.7	1	23	344	368	344	368	0.94
6	9	0.0058	0.5	11.1	1.8	1	23	374	396	374	396	0.98
7	9	0.0015	0.13	13.0	3.1	2	23	403	425	402	425	0.96
8	9	0.0018	0.16	12.7	1.1	1	23	431	453	431	453	0.97
9	9	8.6e-05	0.0074	16.9	0.3	2	23	460	481	460	481	0.97

Sequence Information

Coding Sequence: ATGGATGAACTTTACAATTCATGCCTTGCTTGTGCAAAAGAATTAAACtcacacaaaaatttaaatgcaccaaataaagttaacattttcgAAACACTGGATATCGCAAAGAAACTTGCTACCTGTATTTCAGTAGAAATATCGCTTGCAGACGAATATCCGAAATTTCTATGTGCATGTTGTTATCAGAAAGTCAATGATTTCTATCGGTTCCGAGAAATGTGTAGAAAATCAATTCAACATTTTGAAGAACTGCTATTGGCTAAAAAATCATTGTTTTCAGAAGATGAAGTTCTCATTTCAATTTTGGAAGATCAGTCGAGAAACGTTACTCGAGTGAACGAACTAAATCATCTTGAAGACACTCCTGTTAAATATAAAGAAGATTTGGAAAAGCAATCAAAAGTGATTGATGATTATAATAAGGAATATAAAATAGCAAATGCAGAATACTGTAGACAAGGGATGCCAACACTAAACAAGCATAGTGATGATGAAGACAACTGCGATTCTGATGTTGCGGATAACATCAGCAACAACTCATCTCTTAATGAAAACAGCAAAACCTCAAAAAACGTtgctaatattaaatttagcaaattcaaatcaataaaaacaacgCGTCTAAAAAAATTGGCTGATTGCGATGCGAAGACGACTTATCGTTGTGATATCTGTTCGTCACGATTCTTCGCTGAGCACCGTCTCATTGCTCACAAACGCGAACATGAAGGCCTTATACCGTATCCTTGCACGCGCGAGGGCTGCAGCAAAGCATTTAATCGTAGGAGTGGACTGGCAAGGCACCTAAGACAGCATGATGGACATAGTTTTCAGTACGCTTGCGATCAAGACGGCTGTGATAAAGTGTATAAGCACAAGCCAACTTTAGTCATGCATCAGCGTAAATATCATAAATTGGGACCGGAGTTAAAAACGCACATTTGTGAAATTTGTGGCAAAGTATTTAAAACGACGACAATGCTAAACGATCATCATTACACGCACAAGGACAAATCTGAACGTCCCTACGCGTGTGAACAGCCAAATTGCATGCGTCGATTCTCAAATAAGGATAAACTGAAGGTGCATCTTATGCGACATGCTGGAATTAAGAACTATGTGTGTACACATTGTGGCATGCGCAAAACCACAATGAACGAGTTAAAGGTTCATATTAATTATCATACGCTGGAACGTACGTGGCCATGCCGGTTTTGCACACACATTTGTAATAGTTCAGGCAATTTGAAAACACATATACGCACTGTGCATGAGCGTGCTAAAGATTATGCATGCCGCTATTGTGAGCGCACTTTTGCCAAACCAGACACGCGCAAATACCATGAAATGACACACACGGGGGAGAAACCGAATGAATGCTCCGAATGTGGTAAGCGCTTTTTACAACCAGCAGCATTGCGCACTCATCGCAAGATTCATCAGCGACAGGGCGCGTATAGTTCAAAagcgaaaataagtgaaaaggaGAAACCTGCGCAAGAAACTGTACTCAAAATAGTAGAAAGTTCTGAATAA
Protein Sequence: MDELYNSCLACAKELNSHKNLNAPNKVNIFETLDIAKKLATCISVEISLADEYPKFLCACCYQKVNDFYRFREMCRKSIQHFEELLLAKKSLFSEDEVLISILEDQSRNVTRVNELNHLEDTPVKYKEDLEKQSKVIDDYNKEYKIANAEYCRQGMPTLNKHSDDEDNCDSDVADNISNNSSLNENSKTSKNVANIKFSKFKSIKTTRLKKLADCDAKTTYRCDICSSRFFAEHRLIAHKREHEGLIPYPCTREGCSKAFNRRSGLARHLRQHDGHSFQYACDQDGCDKVYKHKPTLVMHQRKYHKLGPELKTHICEICGKVFKTTTMLNDHHYTHKDKSERPYACEQPNCMRRFSNKDKLKVHLMRHAGIKNYVCTHCGMRKTTMNELKVHINYHTLERTWPCRFCTHICNSSGNLKTHIRTVHERAKDYACRYCERTFAKPDTRKYHEMTHTGEKPNECSECGKRFLQPAALRTHRKIHQRQGAYSSKAKISEKEKPAQETVLKIVESSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193793; iTF_00190872; iTF_00191561;
90% Identity: -
80% Identity: -