Basic Information

Insect: Bactrocera oleae
Gene Symbol: -
Assembly: GCA_001188975.4
Location: LGAM02014340.1:616108-621528[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.016 1.4 9.7 2.6 1 23 237 260 237 260 0.96

2 10 0.00012 0.01 16.5 0.5 1 23 267 290 267 290 0.96

3 10 0.15 13 6.6 2.8 3 23 298 317 296 319 0.82

4 10 0.00017 0.014 16.0 3.8 1 23 322 344 322 344 0.94

5 10 2.9e-05 0.0025 18.4 0.8 2 23 353 374 352 374 0.96

6 10 2.1e-05 0.0018 18.8 1.0 1 23 383 405 383 405 0.98

7 10 1.3e-06 0.00011 22.6 1.6 3 23 412 432 410 432 0.97

8 10 0.00029 0.025 15.2 2.8 1 23 438 460 438 460 0.98

9 10 8.6e-06 0.00074 20.0 0.4 1 23 465 487 465 487 0.97

10 10 0.00061 0.052 14.2 0.7 2 23 493 515 492 515 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.016	1.4	9.7	2.6	1	23	237	260	237	260	0.96
2	10	0.00012	0.01	16.5	0.5	1	23	267	290	267	290	0.96
3	10	0.15	13	6.6	2.8	3	23	298	317	296	319	0.82
4	10	0.00017	0.014	16.0	3.8	1	23	322	344	322	344	0.94
5	10	2.9e-05	0.0025	18.4	0.8	2	23	353	374	352	374	0.96
6	10	2.1e-05	0.0018	18.8	1.0	1	23	383	405	383	405	0.98
7	10	1.3e-06	0.00011	22.6	1.6	3	23	412	432	410	432	0.97
8	10	0.00029	0.025	15.2	2.8	1	23	438	460	438	460	0.98
9	10	8.6e-06	0.00074	20.0	0.4	1	23	465	487	465	487	0.97
10	10	0.00061	0.052	14.2	0.7	2	23	493	515	492	515	0.95

Sequence Information

Coding Sequence: ATGAATTCGCCTAGTCGCGCTGAAATCCACTTTGAAGATATGCGTTGCTGTCGTTCCTGTCTGTCTGTGGCTTCCGAGGATGATCTTGAGGATTATATTGATCTACTGGAGACATTTACTGCCGAGTGTGGAAGCATTACTTTACTAGAGTCTTTCAATAAATGCACTTCCTTAAATGTGCTGATAGAAGATTTTATTATTGAAGGATATCCGCCTTGCCATTACATATGTGGACGTTGCCGTTTAGAACTCAAGCAAGCTAATGAGTTTATAGCCCGAGCACAATTAAATAATCAGTTATTAAAAGAACAATATAGCCGTGCCAAATCTATACATTCCCCAATAAGTGATAGTGAGCTACatgaaatcgaaaataaaaacgaatcCATTGCTGAAGAATCAGAACATGATGAAAATGAAGAGGAACTGAAAACTGGGagtTTTACAGATTTCGAGTTTGACAACCAGAATTCTCCCGTGTTGGCTGCCAGTGAGATACTTGAGCCGCCGGATGATGATATTCAAGAAGATAATGAAATCGCGCCGACAACATTAATCAGTGTTGAACGAGTAATTtctaaaaatgataaaaatgcTGTCAATAATTCGCAGACATCGAAAGCCAGTAAAGAATCTGTACTAAGTGCTAACACCTACCGAAATGAGGAAGACACAAATATTGATGAAACAGACAAgacatattttgaatttaaatgtgagTTTTGTACTTGCATATTCGAATTTCAAAGAGATTTACTGCAACATTATGAAATTGACCACGCGGACAAAACACTTAATTTTCCCTGCGACATTTGCCAAAATCGATTTGTAACGAAAAATGCTCTGCGACTGCATCGACGTCAGGTGCATCAGAAAGATGAATATCTGGATTGTAAGCATTGTGGACGTACCGTATTAAAAACATTCTATAACGTGCATTTGAGGCGCCACAAACAACTAAAATTCTTATGTAGCAAATGCCCAAAAAGATGTGTTTCGCGTTACACACTAAAAAAACATATGGAACTGCACTCCGAAGAGCGTGATCGCAATATTGAATGTGTCGATTGTGGCAAACGTTTCTTTTCACTTGAACATCTGCAATTACATCAAACCATTCACATTTCACCCGAAGATAGAGCAGTATTCGAATGTACTGTTTGCTCCAAAACATTCTTACGCAAATCGAATCTTGGTTTACATATGCAAATGCATCGCGGCGAGACAATGGATTGCCCACATTGCGATAAGAAGTTTGTAAGACGTAAAGATCTCGAAATACATATACGTTTCCATACTGGCGACTTTCCATACTCATGTTCGATGTGTGACCGAAAATTCGCCATTAAAGGACATCTTAACTATCATGAGAAACGTCATCTGGGCGTGCGTTACAAATGTGACGAATGCgagaaaacatttataaatctGGCCGGTTTGCGACAACATCAGTATGAGCACACGGGTATGCCACTAATGTGTAGTGTTTGTCAGCGCGGCTTTCCAACTCAATTCAAGATTCGCCGTCATTTGCGCAACGTACATAAACACCTTTTTAAGAAAACTGACTACTCAGATGCATTagcaaaaaagtatataatcgCTACAACAAATTCAAATCAAGCAATCAAGAAAGCAACAGAGTTAGTAGATGAACTAGAAGACACAATCGAAATGCTTGAGGAGCATGCCGAAGACATTCCATTAAATATGCTGTCTGTTTAA
Protein Sequence: MNSPSRAEIHFEDMRCCRSCLSVASEDDLEDYIDLLETFTAECGSITLLESFNKCTSLNVLIEDFIIEGYPPCHYICGRCRLELKQANEFIARAQLNNQLLKEQYSRAKSIHSPISDSELHEIENKNESIAEESEHDENEEELKTGSFTDFEFDNQNSPVLAASEILEPPDDDIQEDNEIAPTTLISVERVISKNDKNAVNNSQTSKASKESVLSANTYRNEEDTNIDETDKTYFEFKCEFCTCIFEFQRDLLQHYEIDHADKTLNFPCDICQNRFVTKNALRLHRRQVHQKDEYLDCKHCGRTVLKTFYNVHLRRHKQLKFLCSKCPKRCVSRYTLKKHMELHSEERDRNIECVDCGKRFFSLEHLQLHQTIHISPEDRAVFECTVCSKTFLRKSNLGLHMQMHRGETMDCPHCDKKFVRRKDLEIHIRFHTGDFPYSCSMCDRKFAIKGHLNYHEKRHLGVRYKCDECEKTFINLAGLRQHQYEHTGMPLMCSVCQRGFPTQFKIRRHLRNVHKHLFKKTDYSDALAKKYIIATTNSNQAIKKATELVDELEDTIEMLEEHAEDIPLNMLSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191542;
90% Identity: -
80% Identity: -