Basic Information

Gene Symbol
BDP1
Assembly
GCA_001188975.4
Location
LGAM02013578.1:2196157-2198854[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.9e-09 1.5e-05 25.2 0.0 3 44 451 492 449 493 0.95

Sequence Information

Coding Sequence
atgGCTATGCGTCGGCCCCGTATAAAAGCGGCTGCGCTTTTAACGACCAAGCGAAAATCTCGGGATGTCAAATCTGAAATTGGAGTGAAGCTTGCTATTGTTGAATGTTCAGAAGAAATGAATGCAAAGTCAGCTAATCTTCAAGTTGAAAATGTTGGAGATGTTAGAAATACAACTGGTGATAATAGTAAGGATACTAATCTCGCTGAAAGTATTTCTTCTGAACACATAGAAAATAAACACAATGATGATGCAACAGAACTAAAATCTAAAGGCTCCAATATTGTATCAACGCAGCAAAAATCTTCCgctaaaatattagaaaataatgaaagtaaTGAAGTTTTTCAAGATAAGATAGAAAATAAGTTAGAAGAATCTGATTCTTCATTTAAATGTCCTGCTCGTGTCGAATACATACGGAGTAATAGTCTAACTACTGGAAATACGGGCACCGATGATGTTTTCTACTGCGATATGGAGGAGAGTATTTTACAGTCGGATATGCAAAAAACTGCCAGTGAATGTGCTCCAATGCCTTCAAAGCAACAAGTGCGGCAAAGAATACGTCCTATTCCAACATTTCCTAGGCGTAATAGTTTTGTAGGTATAGGCAGTCCTTCACAAAGCTCATTAGACGACGCAACAGtgcCTGTTGATATACCAATAGATCATATAAAACCAATTCTGGTAGCAGAGTCATTGGAAACAACTAATTCACAAAAAGTGCAACCATTAACGCACCGGAGAGAGCGTCATTATTCAGCTTCAATGGCTCAATCACCTCATACTCCGAACTCTGCCATGAGTCAACACCATTATACTCCTCACAAATTCACACCTGCAATGGGGCTTAGTCGTATACGCACAGAATCCAATTGTTCAGCATTTTCAGATACTTTCGTAACAGCACCGAAACTACGTAAAACTGACGAACATAGTACTCGTACTAATTCCAGGCGTGACGTCTCTTTGCGAATTGTAAATGGTAATTTAGATAAATCgtcattaaaaatgtttgatttaATTTACTACAACCCTGTCACAAATCCCATGGAGAAGCGAAATACAATTTCCACCATTAAGAAAGAAACTACAATAGATGAAAATGATACGAAACTATCAACCCCAGAGTCAAAAGTAGAAATAGGTGATGGAACAAATAACGCTATGCCTGTGCCACAACTTAAGTTGAATGCAAACGGAGATTTAATTCTTGATGAGAAAACTTTAGAAATTGAAACCACTGCAGAGCAAGAGGCACGAAAAGTGCTGGCGAATTCATCGCTTATATTTCTTGATGAAAATACTGGAATGAACGGTTTCTATAAGCGTCAAAAACGCACTAAAGATTGGCCACCGGAAGAGACTATAAAGTTTTATCGATGTTTGCAAACGGTAGGAACCGACTTTTCACTAATGTGCCAATTGTTTCCCAAACGTACCAGACGGGATTTGAAACTAAAATTCAAGAAAGAAGAGCGTAATAAtttagcgttaatcaataaGGCCTTGTTGTATCCAAAGCTTTTTAACATTGATGATTTAAAGACGCAGCTAGAGACTGAAGAAAAGGAGCGTGAAGAAGCGATACAGCGTTGGAAGGAAATACACGAAAAAGAAGCCAAAACCATTAAAAAGGTAAAAATCAACAGCAGTACAGCGGCGCGGGCACTCAAAAACGGGGAcgatatatatgaaaatgaaaatgttgtaaaGCGAAAGCTTAGTCGTCGATCCAATGCTACTGACAAGCAAAAGACTGATAGCGGTAAAAAATCAAGAACGTCACAAACCCAGCAAACACTTTCTGGTACCAATGGAACAGAAGCAGTACCACAACAAACACagaaagttaaaacaaaacaagGTGTATTGCATAATAATTCTGAAGAAGTATTGTCAAGTCAGCCCCAAGGTATCCCACTGCCGTTGCCAACGCAGCCAAGTGATGTCGCATCTGTAAAACTTGAGGTTGTACATGCACAAAACTATACGATTAAAGCAGAACATCCCACTAATGAAAGTAATTGCTTCAACACTGAAATGCCTTCGACaaacgttgaaaaaaatttggaagtGCTGAGCAACTTAGATGCAATGGCAGAGGAGTTTATTAACATTATAGCACCGACAAGCTGCGATGCAACGCAACATTTGAATGAAATAATAACACCAACTAAAAAGAGTTGTTCACAATCTTCTGCAgcagttgaaaataaaacatttgtcGATTTAGACAATGGAACGGTAAATACGGTAAATACGTTACAAGGAGAAGAGGAAAGTGTGGCGGTGTTGGATGCGATGCCTGCCACACCGTCTTCAATTTCGCAACGAGAAGTAGACGAGTGTGACATTCAGCAAATATTAATGGATTTGGCGGATGGTTCTTTGGTTCTCGTTTCCACGTTAGATCCCGACAACGCAGATCAAGTGGTGAACGAAATTTATATGATGGATAAAGTTACTGGGGAATTGTGTGAAAAGCCGTTAGATATACCGGAGTCAATAGTGCAGTGCGTTTTGTCTGTGATGAACTAA
Protein Sequence
MAMRRPRIKAAALLTTKRKSRDVKSEIGVKLAIVECSEEMNAKSANLQVENVGDVRNTTGDNSKDTNLAESISSEHIENKHNDDATELKSKGSNIVSTQQKSSAKILENNESNEVFQDKIENKLEESDSSFKCPARVEYIRSNSLTTGNTGTDDVFYCDMEESILQSDMQKTASECAPMPSKQQVRQRIRPIPTFPRRNSFVGIGSPSQSSLDDATVPVDIPIDHIKPILVAESLETTNSQKVQPLTHRRERHYSASMAQSPHTPNSAMSQHHYTPHKFTPAMGLSRIRTESNCSAFSDTFVTAPKLRKTDEHSTRTNSRRDVSLRIVNGNLDKSSLKMFDLIYYNPVTNPMEKRNTISTIKKETTIDENDTKLSTPESKVEIGDGTNNAMPVPQLKLNANGDLILDEKTLEIETTAEQEARKVLANSSLIFLDENTGMNGFYKRQKRTKDWPPEETIKFYRCLQTVGTDFSLMCQLFPKRTRRDLKLKFKKEERNNLALINKALLYPKLFNIDDLKTQLETEEKEREEAIQRWKEIHEKEAKTIKKVKINSSTAARALKNGDDIYENENVVKRKLSRRSNATDKQKTDSGKKSRTSQTQQTLSGTNGTEAVPQQTQKVKTKQGVLHNNSEEVLSSQPQGIPLPLPTQPSDVASVKLEVVHAQNYTIKAEHPTNESNCFNTEMPSTNVEKNLEVLSNLDAMAEEFINIIAPTSCDATQHLNEIITPTKKSCSQSSAAVENKTFVDLDNGTVNTVNTLQGEEESVAVLDAMPATPSSISQREVDECDIQQILMDLADGSLVLVSTLDPDNADQVVNEIYMMDKVTGELCEKPLDIPESIVQCVLSVMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-