Bole003283.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- SMARCC2
- Assembly
- GCA_001188975.4
- Location
- LGAM02038715.1:1240600-1244836[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 2e+03 -0.8 0.1 34 43 203 212 201 214 0.86 2 2 6.8e-15 1e-11 45.0 0.2 3 44 653 694 651 696 0.95
Sequence Information
- Coding Sequence
- ATGAATACTTTAGGTCCGAAAAAGGACGGAAGTCCTAATGTGGAGTTCTTTCAATCGCCAGAATCTCTACAAGGATTCGAAACAATCCGCCTATGGctacagaaaaattgtaaaaaatatTTAGCAAATAATACTGAGACAATTACAAGAGAATCGTTGGCGCAGTTATTAGTACAATTCCTGCAATATGTGGAGGCGAAATTGGGTAAAAATGCACAGGAGCCACCGGCAACACGTATTCCGATGCGATTATTTATGGATTTTAAACCAGGTGGTGGCCTATGTATCATCTTTAGTACAATGTTTCGATTTCGTGCTGAACAACGCggcaaaaaatttgatttttctgtGGGAAAAAACCCACCACGCAAAGATCCAAACATACAATTACTTATTGATATCGAACAAGCACTCGTCGAGGCAAATCTTTACCGTAttcattacatatacatacgacCGGAAATTAACAAAGAATTAGCTCAGAAGTTAAGAGATATCTTAAGTACCAGGCGCGTGGAGATTGTAACCGACGAAGAAGAAGCTACACACATTATATACCCAGTTGTTGATCCACATCCTGACGAATATGCACGCCCCCTTTTCAAACGTGGTAATCATGTAATGTTACATTGGTATTACTTCCCGGAATCTTACGACTCCTGGGCTATAAACTCATTTGATTTACCGGAATATGTACCAGAAAATCCTGAACTACCAGCAGAACAATGCTGGCTTGTCTCTGCATCTTGGATTTTAGACCTAGAACAATATAACGAATGGATGGCTGAAGAAGACTATGAAGTAGATGAAACGggaaaaaagaaaacacacaAACATCGTATGTCGGTTGATGATATAATGTCGTTGGGCACAGATGAGAAAAAACGAATGTCGGGTGGTAGTGGCGCAACTACCAAGCAAAAGCGGCGCCGCTCGCCTTCACCAAATACATCCAAGCCTGGCAAACGCAAACGCTCTCCTGCTGTATTACATAAGAAAGCGCGCAATGAAGAGGATGATGAAGATTTGACTCGCGATATGGATGATCCGCCGGCAGAGCCAAATGTGCAAGAGGTAGTGAAATCATCAACGCTACAATCAACTGCTAGTCCAGCACCGGGAGGAAAATCTCGTGCAGACAATGACATGATGCCGATTAAAGGAGGAACCATGACCGATTTGGATGACGAAATGACAGGAGGAAGTGCAGTTCAGGCTCTATCCACGGGCGATGGTGAAAATTCCCAAACTGGCAAAACTAGTGATAACAGTAATACACAAGAGTTCTCTTCCTCTGCTAAAGAAGATATGGAGGACAACGTAACTGAGCAGACACACCACATCATAGTACCCTCATACTCTGCATGGTTTGATTACAACTCAATTCATGTGATTGAAAAGCGCGCCATGTCGGAATTTTTCAATGgcaaaaataaatcgaaaaccCCTGAAATTTTTATGGCCTATCGTAATTTTATGATTGACACCTAcagATTAAATCCTACCGAGTACTTAACCAGCACTGCATGTCGCAGAAATCTTGCTGGGGACGTTTGCGCTATTATGCGTGTACATGCATTCCTAGAGCAATGGGGTCTCATAAACTATCAAATAGACGCAGAGCTACGACCAACTCCAATGGGACCACCGCCAACttctcattttcatatattatcaGACACGCCCTCTGGTTTGCAATCTTTGAATCCACAAAAAACACAACAGCCATCAGCAGCAAAAGCTTTGCTTGATTTGGATaagccaaaaataaacaaagatggTAAAGAAGTCTCAATAGAAGGAGATAAACCGGCGCTGTTGCCAGGtggaataaatattaaaactgaaGTTTTCGAGAATGGTAATAACACAGGCCAGCAATTCGGACTGAAACTAGATCAATATGCAAAGAAGCCTGCGGCAATGAAGAATCGTACAGCAGCGAGTATGACGCGTGAGTGGACAGATCAAGAAACATTGCTTTTGCTCGAAGGTCTCGAAATGCATAAAGATGATTGGAATAAAGTTTGTGAACATGTAGGAACGCGTACACAAGATGAATGCATACTACATTTTCTTCGACTACCTATTGAGGACCCTTACTTGGAGGATGATGGAGGATTTTTGGGTCCATTAGGTTGTCAACCCATACCATTTAGTAAATCTGGTAATCCAATTATGTCGACGGTGGCGTTTTTAGCTTCAGTAGTTGATCCTCGCGTAGCAGCAGCTGCTGCAAAGGCTGCCATGGAAGAATTCGCCGCCATAAAGGACGAAGTACCCGCTACTATAATGGATAATCATATGAAAAACGTGGAGAAAGCGTCAGCTGGTGGAAAATTCAATCCATCTTTCGGACTATCCAACACCGGCATAGCCGGCACCGGGGCTGACAAAGAGGATGACGAGGCCCATACAGTAGGAACTGGGACTGCGACCATGCCAGTTAACACAGGTGCGGTAGATGAAGAAATGAAGGATGTTTCGAAAAAAGATGGTACAGAGAATAAAATTGAAGACACTAATGACACAGATACAACGTCAAAAGATCCTGATATCGTAAAGCAACAAATTTTCAACGAGGCTAACGTTCAAACCGCTGCAGCCGCAGCATTGGCTTCAGCAGCTGTAAAGGCCAAGCACTTAGCCGCCTTGGAAGAGCGCAAAATTAAATCGTTAGTCGCATTACTTGTGGAAACGCAAATgaagaaattagaaataaaactaCGACATTTTGAAGAGCTGGAAACAACAATGGAGCGCGAACGTGAGGGATTAGAGTATCAGCGCCAACAGCTTATAACCGAACGCCAACAATTTCATTTGGAACAATTGAAAGCTGCAGAATTTCGAGCACGTCAGCAAGCCCACCATCGCCTACAATTAGAACAGCAATGGCAAGGAACTACTGGCGTAAACGCCGCAGGCAATGGTTCACTTACTGGTAATTCTAATGCAACACTCGGTGGTGTCAGTAATGCACCGCCTACGCAAGGCCATCCAATAGTGAGTGGGGCCAGCAGCGTGGCCGCCGGTGGATCGCTTGCAACAAATGTTAGTAGTGTTGGGTCTCAAAACGCAACAGCTGCTGTTCAAGGTGGTAGCACTCAAACATCTATTGGCAACACCTCACAACCAGCTACGGCTGCACCGCTGACTTTACCTGCAACTATCGCTTCGTCTGCACAACAACAAGCGCCAACTCCAATGGATACTATCACAACTACTTCTATAATCCCTACAACTGGCGTAGAGGGAGCTACAATCACGGGCCAGACAATTTTGTCACCGCCAAGCGGGTCAACAAGCGTGCCATCTGCAAATGCACAACCAACTGGTCTCTCTCCAGCAGTACCACCATCATAA
- Protein Sequence
- MNTLGPKKDGSPNVEFFQSPESLQGFETIRLWLQKNCKKYLANNTETITRESLAQLLVQFLQYVEAKLGKNAQEPPATRIPMRLFMDFKPGGGLCIIFSTMFRFRAEQRGKKFDFSVGKNPPRKDPNIQLLIDIEQALVEANLYRIHYIYIRPEINKELAQKLRDILSTRRVEIVTDEEEATHIIYPVVDPHPDEYARPLFKRGNHVMLHWYYFPESYDSWAINSFDLPEYVPENPELPAEQCWLVSASWILDLEQYNEWMAEEDYEVDETGKKKTHKHRMSVDDIMSLGTDEKKRMSGGSGATTKQKRRRSPSPNTSKPGKRKRSPAVLHKKARNEEDDEDLTRDMDDPPAEPNVQEVVKSSTLQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAVQALSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMSEFFNGKNKSKTPEIFMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKALLDLDKPKINKDGKEVSIEGDKPALLPGGINIKTEVFENGNNTGQQFGLKLDQYAKKPAAMKNRTAASMTREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPSFGLSNTGIAGTGADKEDDEAHTVGTGTATMPVNTGAVDEEMKDVSKKDGTENKIEDTNDTDTTSKDPDIVKQQIFNEANVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQLEQQWQGTTGVNAAGNGSLTGNSNATLGGVSNAPPTQGHPIVSGASSVAAGGSLATNVSSVGSQNATAAVQGGSTQTSIGNTSQPATAAPLTLPATIASSAQQQAPTPMDTITTTSIIPTTGVEGATITGQTILSPPSGSTSVPSANAQPTGLSPAVPPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189365;
- 90% Identity
- iTF_00189889; iTF_00191297; iTF_00190607; iTF_00193495;
- 80% Identity
- -