Basic Information

Gene Symbol
Mblk-1_1
Assembly
GCA_001188975.4
Location
LGAM02005276.1:1203197-1223085[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3 2.9e+03 -1.7 0.0 1 21 542 562 542 567 0.80
2 2 2.9e-18 6.8e-15 54.7 0.0 1 43 1068 1111 1068 1113 0.95

Sequence Information

Coding Sequence
ATGCTGCCACAAAAGCTTTTACCTTGCGACTCCTTAAGCCGTCATCGTCGCCAGCCCCAACGCCCTTGCCGCCCCCTCTGCTTAGAACGGATCGCTGAGGAGTTGATGGAACGCATGAAATGGAAGCAATATCAAGAGCCATTAACTACGCGCGTCCATACAAATCATACCGTACAATCGCCAGCcgaaacagcagcaacagcagaaTTGCCAGCAGCAACAGCTGCCGCCAGTACAGCAGCGACCTCAGTAGCCCCACAAATCCCAGTAGAACGGCAAACATCCACAGAGTACGATCAACACAAACGCAACGATCAGCCTGTAGAGGAACAGACATATTTGCAGCAACTAAAATTGATCAACGATCTCGCAGACGCCAAAAGTGCGCAGTTAACAACATCACCAATATACGGCCAAAGCAACGGCACTGCaacagacaacaacaacagccaacaCAATCTTCAATACCAGCAGACACACGAGCGCACAGTCGGAGGCGAAACGAACGaagaacagcaacaaaacaaagGAAATACGCATCAAAGCAACTGCGTAGAAGATTACATAAAGGGTAAGGAGGATTGGGAGGTGCAAGCTGTTGCAGACAATACAACAACATCACATAATCACAACCAACTTCAACGTAATAACAGTAATAGTTTAACATTAAACAATAAGACAAattgcggcaacaacaacaacaaaaataatacatcaataaaagcaacaaattcaTCACACAAAAACACACCAACAAACATCACAAGCGTTAACGCCAATCAAAATAGCTTGTCAAGTGTAACTACATCACCACCGTCAACGCATCCACCGCAGCGAGTCACTGAAGTGCTTGAGAGGCAGCGTACGCCCACCGTTGAACCGGTCGATTGGAAACCGAATGAGAAGTGTTACTTTTGCGTGGACGGCAGATTACTCACGGTGAACGCGAAGGGCGAACTTGTAGCCGAGCCGGCGGGCCCCATTGTGTCCGCCGTCGGCGGCGATCCAGTGGAACACGTTCACAGGCTTGAGACCGATAGTGATTCGAATGAATCAGCACATGTGAATTTGGTGAATAATACAACAACTGCGCCTATTGGTaaccacaataacaacagcaacagtacgaataacattaacaataacaacaacaataataataataataacaatcgCATCGACTGGAACAAGCTGTTGACGACACGTTTAGTTGATTTGCCAGCGAATATGACTTCAATGGACTCAATGGCCGCGCAGTTAGCAGTCATTTCTGGTTACCCAAATTTTAATTGGCTACAATtgatgcaacaacagcaacagcaagagCAGCAGCCACATCCCGCAccgatacaacaacaaacacagccacagccacaacaacagcaacagcagcagcaacagcaacagcaaataaGCTCGGCGACACCAACTACCTCAGAGACATCGGCCGCCGCTGTTAGTCCACCACTCAAGGATTCGCCCAGTCCCAGTGATGCCACCGGTGAACAACCCTTAGATCTTAGTTCGAAACCATCGCCAAATTCATCTATTAGTGGCGATTTGAAGTCAGTGCGCTCCAAGACAATGCGTGCCACGCCCACACTCTCTTCACGTCGCCCCTGCACCGATGATGCGCTGAGCAGCGCCGTACAAGAATTTCTCAGCGGAAAGTATAACACACGTAAACCGTCAGACCAATACGCCGGCAGTTCGAGCACGAGCCCGGGACGCGCCAGACCCAATCGCGCCGGAGTGAGTGGCAAACGTGCCAATGTACACCTCGCCAACGCGCTCTTACACGGCATGGACTTGGACAAGGATATGTCCGGCGATGAATGCAACACTGCCGATGGCAATGCAGGCATAACTGTCGGCCATGGGAGTAATGCTTCAACACCACAACCAGAAACCGCCACACACACTGCACTGGAAGAGCTCGCCAACCGGCTGAACGCGACGCATTCTCTGCGTAAATATTGTGTGAATAATGGCACCGGTGATGCGGGGCGACGTGATGCCGCCAATGATGTCGGCAATTGCAGCGATTTGTCACCAAAACCGAACGCAATGTACGTGGATGGCGCTAAATGTGACACCGGTACACCGTCGAGCAGCGCTACACCACAGCCGCAGCAATCGCCGCCAGCGGCTGGTCTTGATCCCACATTAGCGATTTTGCAGGCATTCCTTTTTACGCTCACCAGCTTTGGCGCTTTGCAGCAACGTGCCGATCAGCCGGTTACGCTGCGTGATCTAGTGGCCAATTTGAAGGATATGTTGGAAACACATACCGCGGGTGATTTAAGTGTGGAGGGTCTTTTCAGCAATGGCAAGCCCAATATAATGGATCAATCGTTGTTGGCGCAAAAGCTGCAACAACACACGTCAGCATATGCGGCACAGCGCTTGCCCAAATCAGATACACCAGAGACCACGAGTTCGTTGGACCATCACGAGCCGATTGGTGACGATCTGGCAGCGTCGATTCTTAAGATTCCGTCCTATAAGCCAGTGGCAGGCACGCCGACGCCCACATCGGCTGCTGCACGCGCCTCATGCTCGCCATCCTTGCTGTGCAACAATTCCACCGCCAACTCTATGCCAAATCCCAACGGCGATAGTCCGCATTCCGCGCCCTCACCACGCATCGCCAACTCTATGTTGGCTGCTGCTGTGGCGGCCGCTAGCAATAATGGCACCGCCGCATCTGTCGGTCGTCAGAGCAATAATGACCTATCTGTCATTTCACCGCCATTAATGCAGCACCGCCAATCACCACCATCGTTCAGTTTTCGCGATATGATCGCACATGGCATTCACCGCACTATGAACGAGCAAGCCAATCAGGACGCGCATGCCGCCGCTGCCGCTGTTGCTGCGGCTTCAGCGCCAATGCTGGGCTTGTGCTTGGAAATGGAACGCTCAACTAACAACAATAGCGGCAGCAGTACGGATCATAAGAAACCGACAATATCGGTGGTGAAGAATATAGGTGGTACCGATACAACACGGTTTGGTGCTGCACCCAATGTCTTGGCTGGATCCAGTGTGGCTGGTAGCAGTAGCAGCACGCACAACTCACATGGCTATCATCAGGCGCACATGCATCATCATCTGCCACACCATCTAAGTCGCCAAGAGGCAGCAGCGCTTGCCGCCGGTAAAGGTACCCGACCAAAACGTGGCAAGTACCGCAACTATGACCGCGATAGCTTAATCGAAGCAGTGCGAGCTGTGCAGCGCGGCGAGATGTCGGTGCATCGTGCGGGCAGCTACTTCGGTGTGCCACATTCAACACTTGAGTACAAAGTGAAAGAGCGGCATTTAATGCGGCCGCGTAAACGTGAGCCCAAGCCACAACCCGGACTAGATGGTAGCAGCAGCACGACAACGGGTAAATCAAACTCTAACATTCCTGGTCATCATAACAATctgaacaaaatcaagttgGGCAACGCTGGCAACAGTAATGTCAATTCCAAGCTCAACGAAGCGCATAAGGGCAATAGTAACTCAGCGGCGGCCGCATTCCCAACCAGCGCACCGAACGGCATGAAATTGCCGCTCTTCGATCCCATCCAATATCCGGCACATTTATTTTGGAATCCCTCGCCAGCTGTAGCCTTTAGCCAAATGCATATGGAATTCAATCGCAATGCAGTGGCGGCGCAAAGCGCCAGCGCGGCACAACGTTACACCGAAGAAACGCTACGTGGCGTTGGCAGCACATCGGCCGGCACGCCTTCAAACGCCAACAGCCCCAGTCCTATTGCCAGTCCATTGTCTGCAGCGACAAGTCATACACTCAATATGAAGAGTGCGCGTGAGCTTGCCGAGAATTTATATGAAAGTGCTGGCGCCAATGGTTCCTCAATACTCGACGGCATCATACGAAAAACGCTCGATCGCAAAAGCACTGACGTGGGACCGCCAAACAGTTCCAGCACCGGTGGCGCACTACTCGACCACTTGTTGGTCAAGAAAAGTGCATTACCGCCATATGTTGGCAACAACACTAACGATCATCGCTCACCCAACGCTATGAGCAGTCTACGCGCTAAACGCGCCGCCAGTCCGCTTGCATATACCGAAATCAAGCGTGAACGCGGTAGTCCGCCACACAGTAGTGGCGACGACGATGACGACGACGCCTCACGCAGCGGCAACGACGAAAGTAGCTACGagcacaataacaataacaacagcaaaggTAGTTACATCGGCAATAATGAGTTGCACCTCCAGCATACGCACTTGCACCACCAACAACACAGTCGCAGCCGCAGCCGCTTAACCTCCCACGACTCCGCCGAAACCGATACCAGTAGCATACCCAGCGAGCTCATGGCCAATCACAACAACGGCAATAAACTGACCGCCGATCTTAATGGCAATGGCGGCAGCGCGACAATGAGTAGTATGCTGCCAAAAGTGGAACCACCGCTAGAATTCGGACACGCGCCGCCCACGTTGGGCAGCACATCCATACTACAAGAAAAGTTGGCGCAAATTAAGGCCGAGCAGGAGAGCGAAGAGCACTTATAG
Protein Sequence
MLPQKLLPCDSLSRHRRQPQRPCRPLCLERIAEELMERMKWKQYQEPLTTRVHTNHTVQSPAETAATAELPAATAAASTAATSVAPQIPVERQTSTEYDQHKRNDQPVEEQTYLQQLKLINDLADAKSAQLTTSPIYGQSNGTATDNNNSQHNLQYQQTHERTVGGETNEEQQQNKGNTHQSNCVEDYIKGKEDWEVQAVADNTTTSHNHNQLQRNNSNSLTLNNKTNCGNNNNKNNTSIKATNSSHKNTPTNITSVNANQNSLSSVTTSPPSTHPPQRVTEVLERQRTPTVEPVDWKPNEKCYFCVDGRLLTVNAKGELVAEPAGPIVSAVGGDPVEHVHRLETDSDSNESAHVNLVNNTTTAPIGNHNNNSNSTNNINNNNNNNNNNNNRIDWNKLLTTRLVDLPANMTSMDSMAAQLAVISGYPNFNWLQLMQQQQQQEQQPHPAPIQQQTQPQPQQQQQQQQQQQQISSATPTTSETSAAAVSPPLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKSVRSKTMRATPTLSSRRPCTDDALSSAVQEFLSGKYNTRKPSDQYAGSSSTSPGRARPNRAGVSGKRANVHLANALLHGMDLDKDMSGDECNTADGNAGITVGHGSNASTPQPETATHTALEELANRLNATHSLRKYCVNNGTGDAGRRDAANDVGNCSDLSPKPNAMYVDGAKCDTGTPSSSATPQPQQSPPAAGLDPTLAILQAFLFTLTSFGALQQRADQPVTLRDLVANLKDMLETHTAGDLSVEGLFSNGKPNIMDQSLLAQKLQQHTSAYAAQRLPKSDTPETTSSLDHHEPIGDDLAASILKIPSYKPVAGTPTPTSAAARASCSPSLLCNNSTANSMPNPNGDSPHSAPSPRIANSMLAAAVAAASNNGTAASVGRQSNNDLSVISPPLMQHRQSPPSFSFRDMIAHGIHRTMNEQANQDAHAAAAAVAAASAPMLGLCLEMERSTNNNSGSSTDHKKPTISVVKNIGGTDTTRFGAAPNVLAGSSVAGSSSSTHNSHGYHQAHMHHHLPHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSYFGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSSTTTGKSNSNIPGHHNNLNKIKLGNAGNSNVNSKLNEAHKGNSNSAAAAFPTSAPNGMKLPLFDPIQYPAHLFWNPSPAVAFSQMHMEFNRNAVAAQSASAAQRYTEETLRGVGSTSAGTPSNANSPSPIASPLSAATSHTLNMKSARELAENLYESAGANGSSILDGIIRKTLDRKSTDVGPPNSSSTGGALLDHLLVKKSALPPYVGNNTNDHRSPNAMSSLRAKRAASPLAYTEIKRERGSPPHSSGDDDDDDASRSGNDESSYEHNNNNNSKGSYIGNNELHLQHTHLHHQQHSRSRSRLTSHDSAETDTSSIPSELMANHNNGNKLTADLNGNGGSATMSSMLPKVEPPLEFGHAPPTLGSTSILQEKLAQIKAEQESEEHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00193483;
90% Identity
iTF_00193483;
80% Identity
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