Bole006294.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- retn
- Assembly
- GCA_001188975.4
- Location
- LGAM02026273.1:4712835-4784923[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-26 1.2e-22 80.3 0.0 2 89 355 440 354 440 0.96 2 2 6 2.1e+04 -4.3 0.1 11 24 738 751 736 754 0.78
Sequence Information
- Coding Sequence
- atgcaattatataatatggATTGTACTGGTCGTCGTTCGAATCAAAGTGAACGTGCTCCAGATTTAGGCGAAGATTTGtCTCGTGACGTCGCATCCGATGATGATATACGCGATTGTGATTCGATCGATGGTGATCATCATGTAATTCGTGCAACACGCTTGAATGTCGCAACATTGAAACGCCAacatagcagcaacaacaaaaacagaaacattCATAGCAATAATcataatagcaataacaataataacaacaacaacaatagtacaTTTGTTGGTGATATGAGTTTTGGTGGCAACGCCGGCAGTGTTAGTCTTGGTGTTGGCAGTGGCATGGGTGTGCGCAGTCCCGATCATCACGCTGATCTTCAAATGAGtcatcatcatcatcagttCCCCACAAATCATCCGCTAAATGCGCTTAGCAATTTCATGGGCATCGGCGGTCTACATGGCATTCCAAATCTACCACACAATGATGTCCTGGAGAAGTTAAAGATGCAAGTTCGCGATTTCAAGGAACAAGATTACGCGGCTGCTGCGCATGCGGCTGCCTTTGGGCAAAATCTATTACCCACTAGCTTAAATCCCGCATTCTCACTGCCGCCCACGTCGATAGCACAGTTCGAGCATCGCGCACAGAGTCTGGCCGCACAAGCGGGGGGCGGTGGCAGTGGTATAGGTGGCAACATTGGCGTTGCCAATGGCAATACACAAAATTCACAACACACTGGTGGCAATAATGTGGGCGTGAGCGGAGCGTCGTGCTTGACGAATGGTGGCAACGGTTTGCTTGGTGGCGCTAACGGTAGCGGCGGCCCGGGTATGGGCAGTGGTGTCGGTGGcgttggtggtggtggtggtgttggcGGTGCAAGCAGTGGTAATGGTGGCTTCTCATTCACCTCACCAACGGCGCCGAGCTCAAAAGACGTTAACCCCGCTTCAAATTCTTCCACATCCAGTGAAGCTTCTAATTCTTCGCAGCAAAACAATGCCTGGAGCTTTGAGGAGCAATACAAGCAAGTTCGACAGCTTTACGAGATCAACGATGATCCGAAAAGAAAAGAATTTCTGGATGACTTATTCTCATTCATGCAAAAGAGAGGCACACCCATCAATCGTTTACCGATAATGGCGAAATCCGTTTTGGACTTATATGAGCTATATAATTTGGTTATAGCGCGTGGCGGTCTTGTTGATGTTATCAATAAGAAATTGTGGCAGGAAATAATTAAGGGTCTACATTTACCCTCAAGCATAACAAGTGCCGCATTCACATTGAGAACACAATACATGAAATATCTTTACCCCTACGAATGCGATAAGAAGAATCTGAGTACACCTTCTGAGCTGCAGGCGGCCATTGATGGCAATCGGCGTGAGGGTCGTCGCTCCAGTTATGGCCAATACGAGGCTATGCATGCTCAATTGCAAATGCCACAAATTGGACGTCCACAGTTGCCCGGAGGTATACAACAAATGTCACCATTGGCGCTTGTCACACACGCCGCCAACAATCAGCAAGTGCAAGCCGCGGCTGCAGCCGCTGCTGCACACCACAGACTGATGGCGCCCTCTTTCGGTCAAATGCCGAATTTGATGACGCACGAATTGGAACAGCGCATGgtggaatatattaaattgataCAGGTGAAGAAGGAGCAGCATAACAACGCTGCTGCTGCGGCGGCAGTGGCGGCGGCAGCAGCGGCCGCTGGTGGCAATGTGGCTGGCGATGCGGCAGCTTTGGCGCGTGTCGGTGCGCCTGGCAGTGGTAGTGGTGCGCACGTAAAACAACCACAACGGCAACGTTCAGCAAGTCCGGAGACTGCTAGTCATGAGGCGATGAACGCTTTGGACATTTCACGCGTCGCGCTTTGGCAAATGTATCACAACAACACCAGCCCACCAGTGTCGATGAACGCCTCACCACAGGGAAGTGTAGGAGGAGCGGGGAGCATCGGCGTAGGAAACGCATTGGGCGTGCCAAGCCTAACCGAACAGAACAGTGAGGCTCTCAACCTTTCCGATTCACCGCCAAACATCAACAACATCAAACGCGAGCGTGAGCGTGAACAATCGCCCGAACCGTGCGATCGCGACGATTTCCATAATCAATCGCCGCCAACAAAACGTGGCGCACTCAATTTTCCGACTGGCTTTTATTTGCCGCCGAGTATGGCTGCTGCAGCAGCTGCGGCAGCCGCCAATTTCcatcaacaaaacaacaacagcaacaatcatATGCCCCAAGACTCCGATGGTGAGGATGCCGATGATGACGCTGATACGCACAACACCACCAACAATTCAATGGCACAAGACGAAGAGTCCGATCGCCCCGCATTGAATGGTCACCATCAGCATCTGCATCATCATCTTCAGCAACTTCACCACTTGCCACACAACCTACAAATGACGCATCATCAACACCTCGTCAACAACACGAGCGGCAATCACGACAAGTCTGATGATTCAGCCATCGAAAATTCTCCCTCGACTAGTGCGGTCTCGGCCGGTGGCATTGGTGTTGACAGCAGTAATGGCAACGGTGCTTGTGGTGACAGTGCTAGCGGTCACATTTCACCGGTTTCCACAAAAAAGAAACACCTGTCGAAGCAGCAAAATAATAATGGCTCAACGGCCATGGATTGTAGCAGTGGTGGCGTCGGGCGTGATCAATCTAATAGCCCCAGTTTAGGTGGCGTCGAGGATACGTTGAATCTCCTGTCGGGCATGCAATTCCGTGTGTCTCGTAACGGCACCAACGCTAACGGTGAACAACAGCTGATCGTAAATCTCGAATTGAATGGCGTAAATTATTCGGGTGTGCTCATTGCGAATACAACTAATAATTCCAATGCCGGATCGCCCTCAGGAGCGGAGCTTAAGCAAAAGAAAAACCAACTCATGGAAAACAACGAATTGGTGGATGCGACAGCAGAAGAAGCAAAAGATGTGAGCGGCGGTGGTACAAGTGGTGCTGACGGTGACATCGAAGATGAAGACATGGGCGATTTAGCCAGCACAACAAGCACCGACGAAACTACGCCCACAAAGATGAGCAAAAATGGTGGCACCGGTTTATCGGTCATCACCAATAAAAGTGCGTTGAATGAGAGTAACATAAGCGATGCCGTTATGTCGGCGTCTTAG
- Protein Sequence
- MQLYNMDCTGRRSNQSERAPDLGEDLSRDVASDDDIRDCDSIDGDHHVIRATRLNVATLKRQHSSNNKNRNIHSNNHNSNNNNNNNNNSTFVGDMSFGGNAGSVSLGVGSGMGVRSPDHHADLQMSHHHHQFPTNHPLNALSNFMGIGGLHGIPNLPHNDVLEKLKMQVRDFKEQDYAAAAHAAAFGQNLLPTSLNPAFSLPPTSIAQFEHRAQSLAAQAGGGGSGIGGNIGVANGNTQNSQHTGGNNVGVSGASCLTNGGNGLLGGANGSGGPGMGSGVGGVGGGGGVGGASSGNGGFSFTSPTAPSSKDVNPASNSSTSSEASNSSQQNNAWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKKNLSTPSELQAAIDGNRREGRRSSYGQYEAMHAQLQMPQIGRPQLPGGIQQMSPLALVTHAANNQQVQAAAAAAAAHHRLMAPSFGQMPNLMTHELEQRMVEYIKLIQVKKEQHNNAAAAAAVAAAAAAAGGNVAGDAAALARVGAPGSGSGAHVKQPQRQRSASPETASHEAMNALDISRVALWQMYHNNTSPPVSMNASPQGSVGGAGSIGVGNALGVPSLTEQNSEALNLSDSPPNINNIKREREREQSPEPCDRDDFHNQSPPTKRGALNFPTGFYLPPSMAAAAAAAAANFHQQNNNSNNHMPQDSDGEDADDDADTHNTTNNSMAQDEESDRPALNGHHQHLHHHLQQLHHLPHNLQMTHHQHLVNNTSGNHDKSDDSAIENSPSTSAVSAGGIGVDSSNGNGACGDSASGHISPVSTKKKHLSKQQNNNGSTAMDCSSGGVGRDQSNSPSLGGVEDTLNLLSGMQFRVSRNGTNANGEQQLIVNLELNGVNYSGVLIANTTNNSNAGSPSGAELKQKKNQLMENNELVDATAEEAKDVSGGGTSGADGDIEDEDMGDLASTTSTDETTPTKMSKNGGTGLSVITNKSALNESNISDAVMSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00193333; iTF_00190469;
- 90% Identity
- iTF_00193333;
- 80% Identity
- -