Basic Information

Gene Symbol
slbo
Assembly
GCA_001188975.4
Location
LGAM02035380.1:9203858-9208781[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1 1.2e+03 -0.2 0.4 23 41 203 221 201 222 0.86
2 2 9.6e-14 1.1e-10 41.5 13.2 3 65 372 434 370 434 0.96

Sequence Information

Coding Sequence
ATGCTCAATATGGAGTCACCACAGATGTACGACACCGTGCAGACGCTCTCCCAGCTGGACCTCAAAAAGCAGCCACCGCCTCAGCAGGCGATCATCGGCCAGATTACGCTGACCGCCATGTCCAGTGggcagcaacagcaaaacaacaacaatgcgaacAATATTAACAGCAACAACCCAAACAGCAAtctcaacaacagcaacggcacagatgccaacaacaacaacagcaataatgtgGGTAATTTGGCAGCTGCCGCGGCTGTtgctgcacaacaacaacaaaacgctgGACTGGTGGTTAAACAACACGCGGTGCATCAAATGCAGCATGCCGCCGCCgcgctcaacaacaacaacaatgcctcCGCCATTAATGCGAATGTGAATAATGTGAATAATTTGCTGCAAAAGCAAATGCTACAACAATACACGCAATCCGATTTGGATGAATTGACCGCGCAGGAAATCACTTTGGATCTGCAACACCTGATCGACGATCAGTTTCGCGAGCAGGAGGGTTTGGGCATCTTCAGCGATATGGTCACCAGTCCGGGTGGTTTGTCGGCCACGCTGCCGCCCAACGGCATGGTTAGCGCAGCGGCAAAGGTGCTGCAACAACatcaactgcaacaacaaacgTTACGCACACAACAACACAATTATGGACGCAGCGCACTCGCCTACATGCCGCAAGCGGTGCATTCGGGCGCAGCATATAGCAACAATTCGAGCGATGAGAACTCCTCGGTCGGTTCTGACTCGTCCACCATCAAAGAGGAACCCATCGATCCGGAATATCGTCGACACCTACAAGAGACCAATGCGAATAATGCAGCAGCTGCCGCTTTCATAACAAACAGCGGCGCCAATGGGCTCTACAATCCGTATCAGACAGCGTCGAATAATGGCCAGGTGGGCAATAACGGTGGCATGAGCAATGGCGTCGGCGGCGCAGCGCCCAATTTCACCAATCTCACCTCAGCCAATGTGTTGGCGCATCACTCCGTGAACTTACCGCATTTGGCTGCCGGCGCACACCTACTCAAACACCACAACAAACAGCTGCACCATCAACGCAAATCGTCGCTAAAACATGTCGATAAGGGCAGCGAAGAGTATCGGCGCCGTCGCGAACGCAACAACATAGCGGTGCGAAAGTCGCGCGAGAAGGCGAAGGTGCGCTCACGCGAAGTGGAGGAGCGCGTCAAAACGCTGCTCAAGGAGAAAGAGGCGCTGCTGCGTCAACTGCAGGAGATGACCAACGAAATTCAGTTACACAAACAGATCTACATGCAGCTGATGAATCATGCGAATCCGGAAGTGAGTCGCGTGTGCCGCAGTTTCCTCAACACCAACGATCATGGGCTTTAG
Protein Sequence
MLNMESPQMYDTVQTLSQLDLKKQPPPQQAIIGQITLTAMSSGQQQQNNNNANNINSNNPNSNLNNSNGTDANNNNSNNVGNLAAAAAVAAQQQQNAGLVVKQHAVHQMQHAAAALNNNNNASAINANVNNVNNLLQKQMLQQYTQSDLDELTAQEITLDLQHLIDDQFREQEGLGIFSDMVTSPGGLSATLPPNGMVSAAAKVLQQHQLQQQTLRTQQHNYGRSALAYMPQAVHSGAAYSNNSSDENSSVGSDSSTIKEEPIDPEYRRHLQETNANNAAAAAFITNSGANGLYNPYQTASNNGQVGNNGGMSNGVGGAAPNFTNLTSANVLAHHSVNLPHLAAGAHLLKHHNKQLHHQRKSSLKHVDKGSEEYRRRRERNNIAVRKSREKAKVRSREVEERVKTLLKEKEALLRQLQEMTNEIQLHKQIYMQLMNHANPEVSRVCRSFLNTNDHGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01470248;
90% Identity
iTF_01189128;
80% Identity
-