Basic Information

Gene Symbol
GATA6
Assembly
None
Location
JAPVRH010006962.1:580527-583230[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.34 6.8e+02 0.3 0.1 1 6 451 456 447 463 0.68
2 2 5e-18 9.9e-15 54.1 9.1 1 35 503 536 503 537 0.97

Sequence Information

Coding Sequence
ATGGAAGCACAGGCACAGCAACaattgcagcaacagcaacatttaTTGTCGAATATCAAAACGGAAGGAAATAGTGGTGATTCTCAATTGCCAGCTGGAACGACAACAACATTGCAACCACAAAAAACAGCAGCTTCGTGTGCTGAAGAGCAGCAGCAAATTGCTCAGGACTTGAACCAACAACTTTCTGTACAGCAACAAGTctcacagcagcagcaacagcaacagcaacagcaatcagccgcacaacaacaacaacaacaacaacaaatttctaGTCAATCAAAGTCGCTTACGCCTAATCATCCTCaagagcaaaaacaacagttaCAGCAACCGCCTGCAATCGTGGCAACATCGGTTGCTTCGATTACCGCCGCTCAACCACATTCTAATGAGGAATACAGAATACCATTACCGCGCAACACACAACAGCGACGAATATTGACCACAGCGGGCACATTTGAGGAAAACGATAATCGTGAGGCAGATCAGCACGACTCACAGTCTGaatatcatcatcatcaatcTCCCGCCGATTACGTGGTAATGGCTCCTCGCAATGAAGAGCATCCACCGACTGGTACCGCTGTCTACACGTACACAACCACTGAGAATggacaacaaattatttgcacCGAAACTGGTGCAGCCATCAAACTCGAAGATATCGAAAAGGATCAGCAGCCCAGTGCCGACGCACAACAACATCATCAGCAACaaatgcagcagcagcaacatcaacaacaactttgTACGCCACCAGGCAGTGGATACGGTGATGCAATTGTTGTATCCGCAGCAGCATTACATCAACATCAAAACCCACATGGCGTCATCAACGCCTCGACACATGGCGGGCATCCGGGTGCGCAATTACGATTCGATCCTGACGAGCGCTACAGCAATGTTCTACAGGACAATGGCAACGTACAAACTATTTACTATAGTCCCTCAGTGGTCGATTCAACCGCACATCCCGGTGAGGCAAAGACATTCACAGATCTTGGTAATACGGAGTACTATTCGAGTCCCCCCACGTACGCACTACCACCACCTAATAATGGTCTATATAGCGTTTCGGGTTCAACACAGCTGATTTGTAAATCGGATCCGAATTTAAGTGCTATGCGACAGCCAGGACAATTTCAATCTTTAATGGAATCGGGCGTACAGGAGCAGTCAATGTGGGCTCCGTCAGGTGTGGAATTCTCTGGATATAATACATATCACCATCAGGTAGTTGATGACTACGGCTCTGCCAATATGACCACTACGCATTGGCCAGGCGCGGGATCAATTACTGCTTACGAGACATCGCTCGTGCCGACTGTCTACGAGTCTCCCAAGTGTGAGAACTGTGGGGCCCTCTACATTCGGAAAGGCAACGATTTCTACTGTCCTACGGGTTGTAATCAACTGCGGCCGACACATGTGCGTTTACCAGCACGTCAAACAAAACCGAAAATACCAGCCAATGCCAACAATCGACGTACTGGAGTCACATGCGCCAACTGCAATACTACGACCACAACACTTTGGCGACGTAACAACGAAGGCAACCCCGTTTGCAACGCTTGCGGTCTGTACTTCAAACTGCATAACACGAATCGGCCGCAATCAATGAAGAAGGATGGTATACAGAAACGTAAGCGTAAGCCAAAAAATAACGGTGGAATGACGACCATGAAACCTTTGCCATTAAATGATTACTCACACACAGCGTTACCGGGCATGCCACAGAATGTGACGCTGATGACACCCAACGGTACAATTTATCCTTCGCAAGTGTCCGCTTTAAGTTTGCCTTTGAATGGTGGTGGCGTAGATGGGGGTATTATTAATGTTGGTCAACAGTCGTTGTCAGGTGAAATACGCGATATGTCCGTAAGCGGTAATGGTAGTAGTGCAGGCGCTGGCTCCGTATCCTCTGGAGGTGTTAGTGGAACCGTTGTTGTGGCAAGTTGTGCTGGTAGCTCTGTAACCGGTACCGCACCACGTAACGTATCGATTGTACAACACGTGACTGGTGACAGTCACTCACCATATAGCAACCCACCTTCACAAAGCCAATCGCCGCACTTATCCAATCCATCGCCGCTGAATCGACAGCCAATCACACAAAGTGTGCAACCCATCGAAGCTGCGCGTACATCAAATGGAGAAATACCGACAAGCGTCATAACGCGGACTGGACTACCCGAACGTTCCTCAAATAATTGA
Protein Sequence
MEAQAQQQLQQQQHLLSNIKTEGNSGDSQLPAGTTTTLQPQKTAASCAEEQQQIAQDLNQQLSVQQQVSQQQQQQQQQQSAAQQQQQQQQISSQSKSLTPNHPQEQKQQLQQPPAIVATSVASITAAQPHSNEEYRIPLPRNTQQRRILTTAGTFEENDNREADQHDSQSEYHHHQSPADYVVMAPRNEEHPPTGTAVYTYTTTENGQQIICTETGAAIKLEDIEKDQQPSADAQQHHQQQMQQQQHQQQLCTPPGSGYGDAIVVSAAALHQHQNPHGVINASTHGGHPGAQLRFDPDERYSNVLQDNGNVQTIYYSPSVVDSTAHPGEAKTFTDLGNTEYYSSPPTYALPPPNNGLYSVSGSTQLICKSDPNLSAMRQPGQFQSLMESGVQEQSMWAPSGVEFSGYNTYHHQVVDDYGSANMTTTHWPGAGSITAYETSLVPTVYESPKCENCGALYIRKGNDFYCPTGCNQLRPTHVRLPARQTKPKIPANANNRRTGVTCANCNTTTTTLWRRNNEGNPVCNACGLYFKLHNTNRPQSMKKDGIQKRKRKPKNNGGMTTMKPLPLNDYSHTALPGMPQNVTLMTPNGTIYPSQVSALSLPLNGGGVDGGIINVGQQSLSGEIRDMSVSGNGSSAGAGSVSSGGVSGTVVVASCAGSSVTGTAPRNVSIVQHVTGDSHSPYSNPPSQSQSPHLSNPSPLNRQPITQSVQPIEAARTSNGEIPTSVITRTGLPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00193212;
90% Identity
-
80% Identity
-