Basic Information

Insect: Bactrocera minax
Gene Symbol: L
Assembly: None
Location: JAPVRH010002620.1:3127-19298[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.1e-05 0.0016 19.1 1.7 1 23 186 208 186 208 0.98

2 17 0.48 37 5.3 5.7 1 23 214 236 214 236 0.98

3 17 2.6e-07 2e-05 25.0 3.1 1 23 242 264 242 264 0.99

4 17 2.2e-05 0.0017 19.0 0.2 1 23 270 292 270 292 0.98

5 17 1.7 1.3e+02 3.6 1.6 2 23 356 379 355 379 0.89

6 17 0.0015 0.11 13.2 0.2 2 23 408 430 407 430 0.96

7 17 0.064 4.9 8.1 1.0 1 23 523 545 523 545 0.97

8 17 3.2 2.5e+02 2.7 2.0 2 23 553 574 552 574 0.91

9 17 0.026 2 9.3 0.3 1 23 582 607 582 607 0.91

10 17 0.81 62 4.6 1.5 2 23 643 664 642 665 0.93

11 17 0.0013 0.1 13.4 1.0 1 23 702 724 702 725 0.96

12 17 1.8 1.4e+02 3.5 0.2 1 23 896 920 896 920 0.88

13 17 0.0011 0.088 13.6 4.6 2 23 929 951 928 951 0.96

14 17 0.13 10 7.1 0.1 1 23 957 979 957 979 0.92

15 17 0.035 2.7 8.9 0.5 2 23 987 1008 986 1008 0.96

16 17 0.0042 0.32 11.8 0.3 1 23 1137 1159 1137 1159 0.96

17 17 0.24 18 6.3 1.5 1 23 1166 1188 1166 1188 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.1e-05	0.0016	19.1	1.7	1	23	186	208	186	208	0.98
2	17	0.48	37	5.3	5.7	1	23	214	236	214	236	0.98
3	17	2.6e-07	2e-05	25.0	3.1	1	23	242	264	242	264	0.99
4	17	2.2e-05	0.0017	19.0	0.2	1	23	270	292	270	292	0.98
5	17	1.7	1.3e+02	3.6	1.6	2	23	356	379	355	379	0.89
6	17	0.0015	0.11	13.2	0.2	2	23	408	430	407	430	0.96
7	17	0.064	4.9	8.1	1.0	1	23	523	545	523	545	0.97
8	17	3.2	2.5e+02	2.7	2.0	2	23	553	574	552	574	0.91
9	17	0.026	2	9.3	0.3	1	23	582	607	582	607	0.91
10	17	0.81	62	4.6	1.5	2	23	643	664	642	665	0.93
11	17	0.0013	0.1	13.4	1.0	1	23	702	724	702	725	0.96
12	17	1.8	1.4e+02	3.5	0.2	1	23	896	920	896	920	0.88
13	17	0.0011	0.088	13.6	4.6	2	23	929	951	928	951	0.96
14	17	0.13	10	7.1	0.1	1	23	957	979	957	979	0.92
15	17	0.035	2.7	8.9	0.5	2	23	987	1008	986	1008	0.96
16	17	0.0042	0.32	11.8	0.3	1	23	1137	1159	1137	1159	0.96
17	17	0.24	18	6.3	1.5	1	23	1166	1188	1166	1188	0.96

Sequence Information

Coding Sequence: ATGGCTGTAAAGATGCTCTATCGTGGACCAAGTTCAagacttgaaaatttaattgaaaagataCAGGCTACAAAGGAGATTGGAGCTACGGatATGTACTCGACGCATACATCTTCAAACTATTCACCGTCAGTATCAGATGGAACCTTAACGCCAAACTCATTACAAAGTCATGAACACATAACACCACATCTTTCTCATCTACAAACTATGCAATACTTTCCTCAGCAGCGTTCCGGCGGAGATGTTAGTCGAAACGAAAATCAAACTAAGCGAGTTGATTTTGACGGAAATGAAGTGTGTGCTAATACCGATGCCAAAACAGCAGAAAACAGCTCAACTGAGACACTTGACACAAGGAAATTTGAAGGAGGAAATGTTAACTCGGATATGCAACACAAACGACAAGCGCGCCTTCATCGGCAGCACCTTTACCACCATGGAGAGTATCACAGTGCGAAGCTTGTTACAAAACTGAGAAAAATCGAAAGAGTCGCGACAAAGTTTGATAAGTTGACAGGTGATGGCATTAAGGGAAGCAACGTTGATGGGTCTTATCAATGTCAGTTCTGTGAAAAATCATTTCCGCGGCttggttatttaaaaaaacatgaacAGaGTCATGCCGAACATCTACCCTTTAAATGTGAATATTGTGCTAGACTTTTTAAACACAAGAGGTCAAGAGATCGCCACACCAAGCTGCACACTGGGGATCGTCGTTACCGTTGCCCACACTGCGAGGCAGCTTTCTCTCGAAGtgATCATCTGAAAATTCATATGAAAACCCACGATAATCAGAAACCATTTCAATGCACTGTATGCAATCGTGGTTATAATACTGCTGCAGCATTGACTTCGCATATGCAAAACCACAAGAAACAGGCAGCTATTTTAGTGGCAGGGGGAAATCCGCAAGCTATTAATTACAGTCCTAGATCGAGTGGATCCGTATCCAGTGGTGGAAGTTTCCATAAAAGGCGCTATGGCGCTACATTAGTTTCTGGcgataataaaacaaatcgaTTGGATCATCCGAAACGAACACGCACTGTCAATCTTCTGACATGTAATTATTGCTCCAAGTCCGATTTTAATTCGATCGAGCAGCTCAATGAACATATTCATTCGAAACATAACCAAGATGTATTTTCCCCAGGGAAACCAACTCCACGTCTTCCTTCGAGTAACGCTATTTCAGATATAAACCCGTTCCAGTTGAGGTGTGAATATTGCACTAGACAGTTTGGAAATCTTCCCGCATTATTTCAACATATACGCCTTGCACATGCCGATCGATTGGCTAGTCCCAATTcatattttgaacatttcaATCGTTTGGCAGCATCTGGGACTTTTAGTCCTCGTCTAGTGAGTGAAAAAACAGTTGAAAGAGAAGACAACATAGTAAATGAAAGCAATATAAAGCTAGAGCAACTTTTACCTTCGGGAAATGTCCATGCTGAAAAACAGGAAGATGAGCCCACTGATCTTAGTCAAAATAAACAACGTTCGACAACTCCAACTCAGCTACCACCGCCAGAGGAGTCTCTCCAGCCTGATTTGTTTTTCTGCAATCAATGTAATGCTGGATTACCAGATTTTGATAAGTTTCGAAGCCatttaaaaacacatataaCGCAAGACTTAAACCTTATATGCCACCATTGTGGTTTGGCTTTACAAGAACAATCAGAACACGAACGGCATGTAATCtcacattatttaatatcaagTTCTGAATATATTTGTGCGGACAACAAGTGTGACAAATCTCATTCAAAGCCGGAGGAGCTTCAAGCTCACATGTTAGAGCAGCACGCAATCCCTATGTTCAAGTGTTCCGTGTGCTGTGGATTATTTGAATCAAAAATTGCAATTCAGACGCATTTTACATGTACACATTCaattgaaactaaaattttacgtTGCACAGCGTGTATGGAAAAGTTTCCATCTGAAAATGAGTTCAGTACACACATCAAATCACATCATCCCGGTCTTAATGGACCGATACCCAATTCCCTTCAATGCATGTTTTGCCGCATTGTCTGTTCAAATGAATTAGAGATGCATTTTCATTTAGCCGCACATGCTCGCCAATTCCAGTGCCCTTCATGCCCGGAAACATTTAACATAGAATTTCTCTTAGATCGCCATATGCAAAATCATCACACAGGCAATAATCGAACAGCATTGCCTTCGAAAGGCACACGAGAAAAGCTATCAACGTCACCGAATATGCCAAGCCAAATGAACTCCCTTTATATGAATGCTTTAATTAGCAAAGCTCCACAAATACCAATTTCTTCGCAAAATAACAACACTAGCGTTTTTGACTACAATATTGCGTTTGCGGCACATCTTAATAAGAGCTTTTTCCCTGATCCCAATACGACACCAACAACACTGACCGATGACAAGTTTTACAATTCATTGCAAGTCGATACAGGCACCGTGAAACACCCTGGACTGATGTACGGCCTTAGTCGACGATATTTTGACACAAGCCGGACATTGATAGAGATGTATGCACAGCATAGAGGGGAGAAACCAACAACTATGGAAAGCTATTACAACAGCCCAAAATCACAACATTTAAAATCTCAAGCcgatttaaatcaaattctaTCACCAGTGGAGTCAGTAATTCCAACTTCTGTTGCTTCGAACTCTTCAATGGGTTATAGCTGTGATATTTGCGAGCGCAATGATTTCCGATCAGAAGGAGAAGTTAATTCGCATCGTAAAATCGTTCATAACATGAAAACGGGTGTTAGTCTGCGCTGCGCTTATTGTTCAGGAAATTTTAAGTCACGCAGTGAGTTGGAACATCACATGAAGACATGCCACAATTCTACTGGAAAACACAAATGTCTCATTTGCGATGAAATTTTCCCCTCGCCGGCTATATTGGCAGAGCACAAATTGCAACACTCTAAGGTTGGTCAATCCGGAAAATGCTCACACTGTAATAAACCACTTGAAGATGTTACAGCATTTAAAGCACATCTCAGTGAGCACAAAAATGAGAATCAGCTTCCAATGCACTGTATCTGCTGCCGCCAATCGCTCCACTCTGATTTCGAAATCAGCTTGCATGCTCAgtTCCATACTAAATCTTCGAACGATCCTGAGAGCGTATGTGCCCTTTGCTTAGAGTCCATTCCGAATAAAATTAACGGAGAAGCAAAAGTTTGTGACAAGTGCTACCGGAAACACAAACTTGGCGCAAAATTTAAGGGCCAACGTTTACGTAAGGACCTTTATGAACGAGAACCCGAATCTTCTCGGAGTACATTGAAGGTGGAAAGTCGTtgtaatatatgcaaattgatCTTACCATGCAGCCAAAAACTACAAGAACATCTGGTCGAACATACGTTTGCTGGTTGTGAAGAACGGGGTTTTAATTGCTACATATGCTCCGCTGTGTTTACTGCTCCAAGTGGTTTGCTTTCCCACATGCATGAGCATGGACTGCAGAGCAGGCCCTACGACTGTAATCTATGTAGCGATAAGTTCTTTTTCCGGGTGGAACTTGAACATCATTTACTGATCCATGAGAAGCAGGACCTActtgagtttaaaaataaagacaaatgTAAGGATAAATTTTCCTTCCTAAAAGAGGACGATAACTCTGGGTCCTATATAAGTGAAGTTAAAAAGGAAATACTCCCGGCCGATGATAAAATCACAGCAGGCGAAGAGGACGAGTAcattgaaatagaaaatgttaCTGATGTCCATCCTACATATAATAGTGCACAACTAACTTTTGTCACTCATAAAGAAAGTCTACCAATGGAAGAATTAAACCAAAAGTGTGTCGAAGAAAacagtatttaa
Protein Sequence: MAVKMLYRGPSSRLENLIEKIQATKEIGATDMYSTHTSSNYSPSVSDGTLTPNSLQSHEHITPHLSHLQTMQYFPQQRSGGDVSRNENQTKRVDFDGNEVCANTDAKTAENSSTETLDTRKFEGGNVNSDMQHKRQARLHRQHLYHHGEYHSAKLVTKLRKIERVATKFDKLTGDGIKGSNVDGSYQCQFCEKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKQAAILVAGGNPQAINYSPRSSGSVSSGGSFHKRRYGATLVSGDNKTNRLDHPKRTRTVNLLTCNYCSKSDFNSIEQLNEHIHSKHNQDVFSPGKPTPRLPSSNAISDINPFQLRCEYCTRQFGNLPALFQHIRLAHADRLASPNSYFEHFNRLAASGTFSPRLVSEKTVEREDNIVNESNIKLEQLLPSGNVHAEKQEDEPTDLSQNKQRSTTPTQLPPPEESLQPDLFFCNQCNAGLPDFDKFRSHLKTHITQDLNLICHHCGLALQEQSEHERHVISHYLISSSEYICADNKCDKSHSKPEELQAHMLEQHAIPMFKCSVCCGLFESKIAIQTHFTCTHSIETKILRCTACMEKFPSENEFSTHIKSHHPGLNGPIPNSLQCMFCRIVCSNELEMHFHLAAHARQFQCPSCPETFNIEFLLDRHMQNHHTGNNRTALPSKGTREKLSTSPNMPSQMNSLYMNALISKAPQIPISSQNNNTSVFDYNIAFAAHLNKSFFPDPNTTPTTLTDDKFYNSLQVDTGTVKHPGLMYGLSRRYFDTSRTLIEMYAQHRGEKPTTMESYYNSPKSQHLKSQADLNQILSPVESVIPTSVASNSSMGYSCDICERNDFRSEGEVNSHRKIVHNMKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCNKPLEDVTAFKAHLSEHKNENQLPMHCICCRQSLHSDFEISLHAQFHTKSSNDPESVCALCLESIPNKINGEAKVCDKCYRKHKLGAKFKGQRLRKDLYEREPESSRSTLKVESRCNICKLILPCSQKLQEHLVEHTFAGCEERGFNCYICSAVFTAPSGLLSHMHEHGLQSRPYDCNLCSDKFFFRVELEHHLLIHEKQDLLEFKNKDKCKDKFSFLKEDDNSGSYISEVKKEILPADDKITAGEEDEYIEIENVTDVHPTYNSAQLTFVTHKESLPMEELNQKCVEENSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563182;
90% Identity: -
80% Identity: -