Basic Information

Insect: Bactrocera minax
Gene Symbol: -
Assembly: None
Location: JAPVRH010005402.1:47799-49053[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0001 0.008 16.9 3.3 1 23 162 185 162 185 0.97

2 8 0.011 0.84 10.5 1.5 2 19 199 216 198 221 0.89

3 8 0.0018 0.14 13.0 3.8 2 23 225 246 224 246 0.97

4 8 0.00018 0.014 16.1 4.2 1 23 254 278 254 278 0.97

5 8 1.1e-05 0.00085 19.9 0.7 1 23 284 306 284 306 0.98

6 8 5.8e-05 0.0045 17.7 0.2 1 23 312 334 312 334 0.96

7 8 0.00022 0.017 15.8 3.6 1 23 340 362 340 362 0.91

8 8 1.7e-05 0.0013 19.3 0.1 1 23 368 390 368 390 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0001	0.008	16.9	3.3	1	23	162	185	162	185	0.97
2	8	0.011	0.84	10.5	1.5	2	19	199	216	198	221	0.89
3	8	0.0018	0.14	13.0	3.8	2	23	225	246	224	246	0.97
4	8	0.00018	0.014	16.1	4.2	1	23	254	278	254	278	0.97
5	8	1.1e-05	0.00085	19.9	0.7	1	23	284	306	284	306	0.98
6	8	5.8e-05	0.0045	17.7	0.2	1	23	312	334	312	334	0.96
7	8	0.00022	0.017	15.8	3.6	1	23	340	362	340	362	0.91
8	8	1.7e-05	0.0013	19.3	0.1	1	23	368	390	368	390	0.99

Sequence Information

Coding Sequence: ATGCTCAAAATATTACCAAGCACTGCATTTGACAATAGCGCAAATACAAAATGTGGCGAAATCTATTGTCACAGTTCCACGGAATTTACGATTATTTGTACACTGTGTGAACTAAAAGCATTCGACTACCAGGATTTCATGCTGCACTGTAAGAATGTACACTTTGAAAACGACTTATTAAAAacagaagaaatatttattgaagtaGCACCATATCTGACAAAAAATGTGAAGGATGAACTAATTTTTGAGGATAACATTGCTGAAGCTGAATTCTTGGATGAGCATGAGTTTGACATTTCTGATGAAGAAGAGGAAAAGTCAGAATTACGGATTATCAAATGGAATGAGAATAAGTCTTTATCTGAACATTTAGACAGTGAtacggaaaataattttgaatctAATGTTGATGATAAAGATTATATATCCCCTGCAGACCGACGAAAGCGAAACGTAAAGCGTGAGTGCCAAACCGAGTCATacaaatgtgaaatatgttctcgTATCTACAAAAGTTCCCATTATCTGCGTATACATTTGACAAAAACACATAATTCTGAGAGTGGAAAAACAGCCCTCATATCATTGCAAAAATGTGACGAATGCACAGAAGAATTTAAGACATTACGTAGTTTGGAGGAGCATTGTCTTTCGGCACATGGTGGaatgaaatgtatgtattgtgaTAGACGATGTACATCGCGAACAAATCAGTTACGGCATATGGAAATTCATACACATGGTACGGAAAGAAGGTTCGTCTGCGATTATGAGAACTGTAAGAAAAGTTTCTTTACACGTCGTCAATATCAAACTCATAGACGCACCCATACCAAAGGAAAGAATTTCATATGTGACATATGTGGCTACTCGTGCCGAGTACCGGAAATGCTCAAAGTGCATTATCGTTCACATACAGGTGAGAAACCCTTTGCTTGCGATgaatgtggaaaatattttgtatcgAAATCGGCTGTTAGGGAGCACAAAGCGTCGCATGGCACAGAACGACCACATGAATGTAAAGTATGTGGACGCTCATTTGCACGAGCCAAATCTCTATACCATCATAATTTCTTGCATCTCGCagagaagaaatttaaatgcaaattatgcGGACAGGCATATGCGCAGCTTGCGGGTTTAGCTGGTCATATGAGACGACACCGGGAGCAGGGCCATTGCTGA
Protein Sequence: MLKILPSTAFDNSANTKCGEIYCHSSTEFTIICTLCELKAFDYQDFMLHCKNVHFENDLLKTEEIFIEVAPYLTKNVKDELIFEDNIAEAEFLDEHEFDISDEEEEKSELRIIKWNENKSLSEHLDSDTENNFESNVDDKDYISPADRRKRNVKRECQTESYKCEICSRIYKSSHYLRIHLTKTHNSESGKTALISLQKCDECTEEFKTLRSLEEHCLSAHGGMKCMYCDRRCTSRTNQLRHMEIHTHGTERRFVCDYENCKKSFFTRRQYQTHRRTHTKGKNFICDICGYSCRVPEMLKVHYRSHTGEKPFACDECGKYFVSKSAVREHKASHGTERPHECKVCGRSFARAKSLYHHNFLHLAEKKFKCKLCGQAYAQLAGLAGHMRRHREQGHC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193043;
90% Identity: -
80% Identity: -