Basic Information

Insect: Bactrocera minax
Gene Symbol: -
Assembly: None
Location: JAPVRH010007705.1:14060-18926[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0027 0.21 12.4 3.4 1 23 606 629 606 629 0.97

2 8 1.2e-06 8.9e-05 23.0 1.4 2 23 639 660 638 660 0.97

3 8 7.2e-05 0.0055 17.4 1.2 1 23 669 692 669 692 0.95

4 8 0.0011 0.085 13.6 0.5 1 23 698 720 698 720 0.97

5 8 2e-06 0.00016 22.2 0.8 1 23 726 748 726 748 0.98

6 8 0.00032 0.025 15.3 0.4 1 23 753 775 753 775 0.96

7 8 3.5e-05 0.0027 18.4 2.8 1 23 781 803 781 803 0.97

8 8 0.0091 0.7 10.8 4.7 1 23 809 832 809 832 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0027	0.21	12.4	3.4	1	23	606	629	606	629	0.97
2	8	1.2e-06	8.9e-05	23.0	1.4	2	23	639	660	638	660	0.97
3	8	7.2e-05	0.0055	17.4	1.2	1	23	669	692	669	692	0.95
4	8	0.0011	0.085	13.6	0.5	1	23	698	720	698	720	0.97
5	8	2e-06	0.00016	22.2	0.8	1	23	726	748	726	748	0.98
6	8	0.00032	0.025	15.3	0.4	1	23	753	775	753	775	0.96
7	8	3.5e-05	0.0027	18.4	2.8	1	23	781	803	781	803	0.97
8	8	0.0091	0.7	10.8	4.7	1	23	809	832	809	832	0.97

Sequence Information

Coding Sequence: ATGGCTCCGAAAGCAAACTTCGTTCCGGTTAAACCAAAAGGTCAAGCTTTTAAAGATAAATCGAAACCGGCTGATGTGCGTCTGTCAAATATTCAAGCAGCAAAAGCCGTGTCGGATGCTATTCGCACCAGCTTAGGTCCACGCGGTATGGACAAGATGATTCAAGCCGGCAATGGTGAAGTATCAATCACCAACGACGGTGCTACCATTCTAAAACAGATGAATGTGCTCCATCCGGCTGCAAAAATGTTGGTAGAACTATCGCGCGCTCAAGATGTTGAGGCCGGTGATGGCACAACTTCTGTGGTTGTCATAGCTGGTGCTTTATTGGAAGCTTCTGAAAAGCTATTGCATAAAGGTATTCATCCTACCGCAATTTCCGATTCGTTCCAACGTTGCGCAATCAAGGCTATTGAAATTCTTACGCACATGTCTACAACAATCGAGTTGACTGATAGAGATACACTCATTAAAAGTGCATCAACTTCATTGAATTCCAAAGTTGTTTCTCAACAGAGCAGTCTATTGGCTCCCATCGCTGTTGATGCTGTACTCAAAGTAACAGAACCGGGAAAAGAGGGAGCtgttgatttgaaaaatatcaaagttaTCCGTAGCCTTGGTGGCACTGTCGAGGATACCGAATTGATTGAGGGTTTGGTATTCACTTCACGTTCCGCTGGTACCAATGCACCAAAGCGCATCGAGAAAGCAAAAATAGGCTTGATACAATTCTGCATTTCGGCACCAAAAACTGATaTGGATCACAATGTTATTGTGTCAGATTACGCTGCTATGGACCGTGTATTGAAGGAAGagcgtacatatattttaaacattgtaAAACAAATCAAGAAAGCCGGTTGCAATGTGCTTTTGGTACAGAAATCCATTTTAAGGGATGCTGTTTCTGATTTGGCGCAACATTTCTTGGACAAAATCAAGTGCCTTGTTGTCAAGGATGTTGAACGTGAAGACATTGAGTTTGTCTGCAAAACACTGAATTGTCGTCCTATTGCATCGTTGGACCATTTTGTTActgaaaatttggtaaatgcTGAGTTAGTCGAGGAAGTGCCATGTGGTACTACGAAATTCGTAAAAATTACCGGCATACAAAATCCGGGACGCACGGTATCTATTGTTTGTCGTGGTTCCAACAAATTAGTTCTTGAGGAAGCAGCACGGTCATTGCATGATGCACTTTGCGTTGTGCGTTGTTTGGTCAAGAAGCGTGCACAAATTGTTGGCGGTGGTGCACCTGAAATAGAGATGGCTTTACAGCTGGCCGCCTATGCACAAACTGTTGAAGGCGTTGACGCTTACTGCTTCCGGGCATTTGCTGATGCATTAGAGGTTATACCATCAACTTTAGCGGAGAATGCTGGTCTTAACCCGATTGCAACTGTAACTGAATTGAGAAATCGTCATGCGCAAGGTGAGAAGACTGCTGGTATTAATGTACGCAAGGGTGCTATCACCGATATCCTGGCCGAGAATGTATTACAACCGCTGTTGGTCAGTATTTCGGCAATCTCGTTATCTACAGAAACAGTGCGTTCTATTCTAAAGATTGATGATATTGTAAACGAGGTTCAGAGTGGCATATTTCTTAAGGACATCGAATTTAATAGTGAATTTCAAGATCCCATTGGCGATGCAGTTGAAAATCCTACTAACGAATTAGAGAGTATTGAATGTCTTAAGAATAGTGTAAAAGACTGTGCATCAGAAATAAGTGGCAAAGAATATAGCAATCTCCATCGGCTAAAAAGACCAAAAAGTTCTTCAGATGAAGAATCAAGGGTAAACAAATACTTCTGTGACGAATGTTCATTACATTTCAAAAAGGGTAGCAATTACGTTATACATATGAGGAAAAAGCATGGCGTTGAAACACCTCCTAGTTGTATTTCTTGTCCGCAATGTTCCAGGACTTTCAAATCTAGATTCAATTTGAATCGTCACATAAAAATACATCGACCTTTGGCAGAAAAGCGAATATATCCATGTCCACAATGTGATCGAAAATTCCAAACGAAAGATTATGTTTTCCGACATATAAAGTTTGTACATGAAGAAATTCGTCCGTTCATTTGCGAAGAATGTGGTGAAGGTACACACACGGAAACTACGCTGCGTGAACATATGCTTAAACATACCGACTATGCACCTTTTGAATGTGAGATTTGTAAGAAAGGATTCAAAAATCAAGCCCGTTTGAAGaatcATATGGAGATGCACAGCTCACATAAGCATATCTGCAGCGAATGTGGTTTAGAACTGAACTCGCGTGTAACGCTGAATCGTCATATGCTTGTGCATTCTGATGAGATGCGTCATAAGTGCGACTTTTGTGGACGCGAATTCAAACgtgcaaaaactttaaaaactcACTTAATACTTCACAGTGGTTTAAAACCATATTCATGTGACTTTTGTGACAAAACCTTTGCTAGTGGTTCCAATTGTCGTACTCACAAAAGAAAGTCTCATCCTGAAGAATTAGCAGCTTTAGAGGCTTCCGGAGAAAAAAGGTTCACCAAAAATATCCCAAAACTAGCAGTTTTAAAGACAGTTACGCGCACAGCTGAGAATCTACTGCCCGTGGTATCTAAGCaaagtggaaatttttctttcggcAAAAAACCGAAATCATCAGCTGGTAGTAAAAATGAAGCACAACAATGTATAGAGAATAAAACATAG
Protein Sequence: MAPKANFVPVKPKGQAFKDKSKPADVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVLHPAAKMLVELSRAQDVEAGDGTTSVVVIAGALLEASEKLLHKGIHPTAISDSFQRCAIKAIEILTHMSTTIELTDRDTLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTEPGKEGAVDLKNIKVIRSLGGTVEDTELIEGLVFTSRSAGTNAPKRIEKAKIGLIQFCISAPKTDMDHNVIVSDYAAMDRVLKEERTYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAQHFLDKIKCLVVKDVEREDIEFVCKTLNCRPIASLDHFVTENLVNAELVEEVPCGTTKFVKITGIQNPGRTVSIVCRGSNKLVLEEAARSLHDALCVVRCLVKKRAQIVGGGAPEIEMALQLAAYAQTVEGVDAYCFRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKTAGINVRKGAITDILAENVLQPLLVSISAISLSTETVRSILKIDDIVNEVQSGIFLKDIEFNSEFQDPIGDAVENPTNELESIECLKNSVKDCASEISGKEYSNLHRLKRPKSSSDEESRVNKYFCDECSLHFKKGSNYVIHMRKKHGVETPPSCISCPQCSRTFKSRFNLNRHIKIHRPLAEKRIYPCPQCDRKFQTKDYVFRHIKFVHEEIRPFICEECGEGTHTETTLREHMLKHTDYAPFECEICKKGFKNQARLKNHMEMHSSHKHICSECGLELNSRVTLNRHMLVHSDEMRHKCDFCGREFKRAKTLKTHLILHSGLKPYSCDFCDKTFASGSNCRTHKRKSHPEELAALEASGEKRFTKNIPKLAVLKTVTRTAENLLPVVSKQSGNFSFGKKPKSSAGSKNEAQQCIENKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190163;
90% Identity: -
80% Identity: -