Basic Information

Insect: Bactrocera minax
Gene Symbol: -
Assembly: None
Location: JAPVRH010000013.1:5705-9268[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0023 0.18 12.6 0.3 2 23 36 57 35 57 0.96

2 16 0.0098 0.75 10.6 2.6 1 23 63 86 63 86 0.93

3 16 0.17 13 6.8 0.1 2 23 90 113 89 113 0.90

4 16 0.025 2 9.3 0.1 2 22 122 142 121 142 0.93

5 16 0.00012 0.0089 16.7 2.7 1 23 150 172 150 172 0.96

6 16 0.0075 0.58 11.0 2.6 1 23 178 200 178 200 0.97

7 16 0.0033 0.25 12.2 4.2 1 23 206 228 206 228 0.95

8 16 0.85 66 4.5 0.7 2 23 695 717 694 717 0.94

9 16 0.081 6.2 7.8 2.2 1 23 741 763 741 763 0.98

10 16 0.011 0.85 10.5 2.0 1 23 771 795 771 795 0.98

11 16 0.0048 0.37 11.6 2.6 3 23 801 821 799 821 0.97

12 16 3.3e-05 0.0025 18.4 0.4 1 21 835 855 835 856 0.95

13 16 0.0015 0.12 13.2 0.5 1 23 864 886 864 886 0.97

14 16 7.3e-07 5.6e-05 23.6 2.6 1 23 892 915 892 915 0.98

15 16 3.8e-05 0.0029 18.2 0.9 1 23 921 943 921 943 0.98

16 16 0.00021 0.016 15.9 2.1 1 23 949 971 949 971 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0023	0.18	12.6	0.3	2	23	36	57	35	57	0.96
2	16	0.0098	0.75	10.6	2.6	1	23	63	86	63	86	0.93
3	16	0.17	13	6.8	0.1	2	23	90	113	89	113	0.90
4	16	0.025	2	9.3	0.1	2	22	122	142	121	142	0.93
5	16	0.00012	0.0089	16.7	2.7	1	23	150	172	150	172	0.96
6	16	0.0075	0.58	11.0	2.6	1	23	178	200	178	200	0.97
7	16	0.0033	0.25	12.2	4.2	1	23	206	228	206	228	0.95
8	16	0.85	66	4.5	0.7	2	23	695	717	694	717	0.94
9	16	0.081	6.2	7.8	2.2	1	23	741	763	741	763	0.98
10	16	0.011	0.85	10.5	2.0	1	23	771	795	771	795	0.98
11	16	0.0048	0.37	11.6	2.6	3	23	801	821	799	821	0.97
12	16	3.3e-05	0.0025	18.4	0.4	1	21	835	855	835	856	0.95
13	16	0.0015	0.12	13.2	0.5	1	23	864	886	864	886	0.97
14	16	7.3e-07	5.6e-05	23.6	2.6	1	23	892	915	892	915	0.98
15	16	3.8e-05	0.0029	18.2	0.9	1	23	921	943	921	943	0.98
16	16	0.00021	0.016	15.9	2.1	1	23	949	971	949	971	0.95

Sequence Information

Coding Sequence: ATGGCAGATGCCAGTACAACTGTAGCAACAGCAACTCCACAACCACCTGCAGTAGCTACAAAATCAATGTTAGTGCAACTGACCACCGATGGTGTACCCAAACTGCACTGCCCTGTTTGTGATAAGGCATTAGTATCGCTAAGCGGTTATGTGAAGCATGTAAAGAAGCATGAGCCACCTGGTGGCTTCCTCTGCCGTTATTGTGATGGCCGTTTCTGTTCCGAAGAAGAATTGAAGAAGCATCGGGACAAGGTGCATACAACAATCGTATGTCGGCTCTGTCCAGAAGTTAcctttacaaatgaaaatgactATCGTGAGCATATACGCGTCATACATAATGGCATCGATAGGGAAATGCTGAAATGTGAGAAATGTGGCGCAGAATATAAGACAATTTATCCATACAAACGACATATAGAAACGGAATGTGGCAAAGTTAAACCACACAAATGTGAACAGTGTTTAATGACatttgtaacaaaatataatcttAAGCAACATATGGTATTACACACTGGCGAAAGGAAGTACTGTTGTAGCTATTGTGGCAAgaattttctgcaaaaagGACGCTTAGTGGAACACGAACGTTCACATACGGGCGAGAAACCGCACAAATGTGATGTGTGTGGCAAGTGTTTTGCACATCGCGAAAGTATTGTAACGCATTCTTCAATACACACCGGCGTGCGATTGGTGGAGTGTAAATGTTGCCTTACACGTTTCTCTTGccattcaaatttaataaaacatcgACGTACACGGCCTGACACCTGTGGTCTACCAGAATTTGATCCGCCCAAACAGCGCACGCGCACGCATCGCCacagaaTACCACCAACACTCAATCCTACGtcagaaataaaagtaaacaattccAACCGCATAATTAAGCCAGATCATAAAGAGCAAGTGCGCAAATCAACCGCAAAAGTAGATGCTGGCACTACAATCTCAAAAAATCATGCTAATGGCAGACTTGGTAAAAGAAAGCGCAAAATATCTACTACTGATACGGAGGAAGACGATGAATATGAGAAGGATATATGGCCCAATGAATGTAGCGCAAATGTGGAAGTTAACGCACTTGAGACTGCCATAGCAACAGAATCGAGAGAAGCAACCACAACCGCATCGCCGATTGGCTTACAAAATGGTTCGGAAGATAAGACAGTGACTGAAGTCGGTAAATTTGAAACGGACTCGGAAGATGAGTATGCAGAATTCGACCCAGCAGAAGAGAGTGTTAGTGAGGATGAGCGTAAAGAAAATGTACAATTAACGcttgcaaaattaaaagatataaaagaagaaaacaccacaatagttgaaaattttattgataatacATATGATGATGACGAACTTGAGTTTATCGACTCGCGAGAGTTTGTTGGCACAGAGTTCGAAGTAAAGTCGGaagatgcaaatattttcaaaaataaagataaactGCTCGATTcaatgttaaaagaaaaaactacgCAAATCGTTATGAAAAGAGAGCAAGCGGGCTTACATGAGACTGAACTGATATTGATCAAAGCGGAGAACAGTGCCAACTATGTGGAGGAGATGGATATTTTGGACGTTGAtagtcATTTAAATACGCCACTAACTTCTTGTAAAATAATGCTGCGAGATGTACGCCAACGTTACCCCGCACTAAAGGATGAGTCGAGAGTGAAAGTGTCACGCAATGCTGTACCATTTCCACGCCCTAGAAGACACCAACAAACTGGAGATACGGTCATTGAACCTATAAATAATGCTGACAGGTTGGCAATTGGTTTggaaacagcaaaaaaagCACGTAAAAGCAGTAAACATGTTGCACAAACGCAAGTTAACGAGAATGGAAAGGTCGCGAAACGCGGACGTAAGCCACGTCAGCTGAcggaaaatgtaaatgtgcCTATTACTAGCgacgaaaatattgaaagtgcGCACGCTGACGAAGATGAGGAGGGAAATAAGCAAACAATAGAAAAAGCAAGTAAGTCGGGACGTATGGCTAAGCTTTCGCAAAAGGAATTAAAGGCGCGTTTGAAACTATCGAAGCGTGGTGAGAAGCCCTGGCAGTGTCCATATTGCATAAAAGTATACCACATACGCAAGCCTTTTGAGAAGCATTTGCGAGACGATCATCAACGCCCAGAGCAGGAGATAAAGGAAACTTTTAAACCCGAAGAAACGACCATTAATGATGGTGAGGTATTCAAGTGTCATATTTGCTCGAAAATATACCTGATGGAGAAACGTTTAATCAATCACATTAAAATGCATGGTCCTGACGGCAGTTTGATTTTCAAGTGCCCGTGCTATTGCTCTGTGTATTTTACAACCAAAGATGAAGCAACTGAGCATGCGCGCAAAGAGCATCGTGATCTCATATTTTGTAACATTTGTGAGAAATTTATGACCGGCCATGATTCATTGAAAAATCATATGAGAAAGCATGAACAGGAGAAAGACATCAAATCCGTGgcaaatagaaattttgtttgtgacAAATGTGGCAAGAAATTCTCTGGACGCACGTCGTTGACCGATCACGTACGCTCAGATTGTGGCCGCAAGCCGTTATATCAGTGCAATGTGTGCGGCAAGCACCTAACTACCGCGGgtatattaaaaacacatCTGCTTTTACACAAGGATGATACGCCGTATCAGTGTGACAAATGCGGCAAGACATTTAAGGTGAAAGCGCAATACAAGACGCATATAAAAACTAGACACACGGATTATAAACCCTTTCAGTGTCATCTATGCCCAAAAGCTTATCCCTATCGTGAATCGCTGCTCACACACATGACTGTGCATACGGGCATCAAACGCTTCCTTTGCAATGGCTGCGGCAAACGTTTCACTTGTGTTTCCAACCTGCAGGCACATCGCAAAGTGCACTCGGATACGTGTGGTCAACTACCGCTTAATGCAAAGGCGACCCAATATATGGGCGTGCAGAaaggaaatttattgttaGGCGCTAAGCCTGAGGCTGGCGTAGATTATAAGGAAACCAATACGCTCATAGCAAAAGAAGTGATCGATCGTGATCGTCCGATGGCCCAAGAGATTAATTATCCCTCAGAACCATCAGCGCCTTTGGCAACTGTGCCACTCAACTACACACAAACGGCGACACCACAATTATTGCTGCCACAAGTTGTCACACAATTTATAGATGATACACATACATTGGCGTCTACGCCTACCGTATATCCTTGA
Protein Sequence: MADASTTVATATPQPPAVATKSMLVQLTTDGVPKLHCPVCDKALVSLSGYVKHVKKHEPPGGFLCRYCDGRFCSEEELKKHRDKVHTTIVCRLCPEVTFTNENDYREHIRVIHNGIDREMLKCEKCGAEYKTIYPYKRHIETECGKVKPHKCEQCLMTFVTKYNLKQHMVLHTGERKYCCSYCGKNFLQKGRLVEHERSHTGEKPHKCDVCGKCFAHRESIVTHSSIHTGVRLVECKCCLTRFSCHSNLIKHRRTRPDTCGLPEFDPPKQRTRTHRHRIPPTLNPTSEIKVNNSNRIIKPDHKEQVRKSTAKVDAGTTISKNHANGRLGKRKRKISTTDTEEDDEYEKDIWPNECSANVEVNALETAIATESREATTTASPIGLQNGSEDKTVTEVGKFETDSEDEYAEFDPAEESVSEDERKENVQLTLAKLKDIKEENTTIVENFIDNTYDDDELEFIDSREFVGTEFEVKSEDANIFKNKDKLLDSMLKEKTTQIVMKREQAGLHETELILIKAENSANYVEEMDILDVDSHLNTPLTSCKIMLRDVRQRYPALKDESRVKVSRNAVPFPRPRRHQQTGDTVIEPINNADRLAIGLETAKKARKSSKHVAQTQVNENGKVAKRGRKPRQLTENVNVPITSDENIESAHADEDEEGNKQTIEKASKSGRMAKLSQKELKARLKLSKRGEKPWQCPYCIKVYHIRKPFEKHLRDDHQRPEQEIKETFKPEETTINDGEVFKCHICSKIYLMEKRLINHIKMHGPDGSLIFKCPCYCSVYFTTKDEATEHARKEHRDLIFCNICEKFMTGHDSLKNHMRKHEQEKDIKSVANRNFVCDKCGKKFSGRTSLTDHVRSDCGRKPLYQCNVCGKHLTTAGILKTHLLLHKDDTPYQCDKCGKTFKVKAQYKTHIKTRHTDYKPFQCHLCPKAYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCVSNLQAHRKVHSDTCGQLPLNAKATQYMGVQKGNLLLGAKPEAGVDYKETNTLIAKEVIDRDRPMAQEINYPSEPSAPLATVPLNYTQTATPQLLLPQVVTQFIDDTHTLASTPTVYP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193747;
90% Identity: -
80% Identity: -