Basic Information

Insect: Bactrocera minax
Gene Symbol: -
Assembly: None
Location: JAPVRH010005175.1:133505-139165[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 8.7e-05 0.0067 17.1 1.6 1 23 375 397 375 397 0.93

2 9 1.5e-08 1.1e-06 29.0 2.4 1 23 403 425 403 425 0.98

3 9 4.7e-05 0.0036 18.0 0.9 1 23 431 453 431 453 0.98

4 9 4.6e-06 0.00036 21.1 0.9 1 23 459 481 459 481 0.98

5 9 3.1e-05 0.0024 18.5 1.4 2 23 571 592 570 592 0.96

6 9 3.3e-09 2.5e-07 31.0 1.6 1 23 598 620 598 620 0.98

7 9 0.002 0.15 12.8 0.7 3 23 628 648 626 648 0.98

8 9 0.00016 0.013 16.3 0.8 1 23 654 676 654 676 0.99

9 9 0.018 1.4 9.8 1.1 1 23 683 707 683 707 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	8.7e-05	0.0067	17.1	1.6	1	23	375	397	375	397	0.93
2	9	1.5e-08	1.1e-06	29.0	2.4	1	23	403	425	403	425	0.98
3	9	4.7e-05	0.0036	18.0	0.9	1	23	431	453	431	453	0.98
4	9	4.6e-06	0.00036	21.1	0.9	1	23	459	481	459	481	0.98
5	9	3.1e-05	0.0024	18.5	1.4	2	23	571	592	570	592	0.96
6	9	3.3e-09	2.5e-07	31.0	1.6	1	23	598	620	598	620	0.98
7	9	0.002	0.15	12.8	0.7	3	23	628	648	626	648	0.98
8	9	0.00016	0.013	16.3	0.8	1	23	654	676	654	676	0.99
9	9	0.018	1.4	9.8	1.1	1	23	683	707	683	707	0.95

Sequence Information

Coding Sequence: ATGGCGATCAATTTCTCCGCATCCTTTGCGGCTTGCATCGCCGCTGGATTGAAGGTACCGCGACAAATAATGTATTGCATCACGCAAGACACCGGGCAGCCCTACGTGCTGTACAAGGACTCACAGGATGGCGAACGCAATCCGGCAGCAATTGGCGGCTCGGCCGCACAGTGGGGCAGCGAAATGTATCCGGGCATACAACAGCAGGCACAGCAGCATTTGcaggcacaacaacaacagaatgGACAAAACCCAGCCGCACAGATAGCGAGCGCCGCGCAAGCAGCTGCCGCGGCGGtggcacaacaacagcagcagcagcaacaacagggCCAACAGCCGCAAAGTCCAACGGGCGATCCGCGCGAGAATGGCGGCGATGGTGTTGGGCGGCAGCAGGGCTCGCCCTCAACGAGTCCATATCCGCCGCAACAGCGCGTCAACGGCGGTGGCCCACCCGACGATGATGTCACCATGAATCAGGTCGCCAACCTGCAGGCCAGTCAGCAGCAGAACTCGGCGCAATCCAACCCAAACCAAAGCAACAATGACCCGCAACAACACCAGAGCTCGGGCCGCGATGGCGGCACGGGGAatccacaacaacagcacgtACAGAATGGTGGTCCCACGCAACCGGGCCAACCTAACGATAACTTCCAAACGCCGCAGGGTGGTGAACTCGGCGGCTACTATGCGCCACGTCATCCAGCGCCACAGGGTGCGATGCTGCCGCCACCCGGCTTCCCGGCACTACATTATCTCAACAAGCCCGTGTTGCCCGGCATGGCGAACGCAATGGAACAGAATGGTGGCCTCGAGGGATATGCTATGCCGGAGCTGCTGCCAGGCGGCGCCGGTGGCGGTGGCGACCAACAAGGCAATAATGGTCAGCAGAATGGTGGCGCTGGTGGTAATGGCGGCAATGCACACAACAGCGGCGCGAATGGCAGTGGCGGCGGTGAAGGTGCCGTCGGCGCTGCAGGTGGCGCCGGCAACGGCAATGGTGCTGGCACTGGTACAGTTGGTGGTGGTACTGGCACAGGTACCGGCACAGGCAGCGGACGTGGACGTCATCCAAACCCCAATAAACCGCCAAAACCACACAGCGATTTGCGTTTGTTCAAGTGTTTGACCTGCGGCAAAGATTTCAAACAGAAGAGCACACTACTGCAGCACGATCGCATCCATACCGACGCGCGTCCGTATCCATGTTCGGAGTGTGGCAAACGTTTCCGTCAACAGTCGCATCTGACACAACATTTACGCATCCACGCAAATGAGAAACCGTTCACATGCGGCTATTGTTCGCGCAGCTTCCGTCAGCGGGCGATACTCAACCAACATATACGCATCCATTCGGGTGAGAAGCCCTACGCATGCCCAGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTCAATCAACATGTGCGCACCCACCAAGATGTCTCACCGAATCTTATCTTCAAGAATGGCCCACATCCGACACTGTGGCCACAGGACGTACCATATCCGGGTGATGAGACTGATACGAAGAATGATATAGCCGGCGGTAGTGGTTATCATGACGAGGATTCACAGGGTACGCCAGACGGCAGCGGCGGTATGCACTATCCGTCATACTTTAAGGACAACAAAGGGCAAAAGATCTTGCCAGATGTGCTGCAGCATATCGGCGTACGGCCAGCCAACATGCCACTCTACGTACGTTGTCCCATCTGTGACAAAGAGTTCAAACAGAAGACGACTCTACTACAACACGGTTGCATACACATCGAGTCGCGTCCGTATCCGTGCCCCGAGTGCGGCAAACGCTTCAGACAACAGTCGCATCTAACACAACATTTGCGAATACACACGAATGAGAAGCCGTTCGGTTGTTTGTATTGTCCGCGTTTCTTCCGACAGCGCACCATACTGAATCAGCATATTCGTATTCACACCGGCGAGAAGCCATACAAATGCGCGCAATGCGGTAAAGATTTCCGTCAGAAGGCCATACTGGATCAGCATACACGCACGCACCAGGTAGGCGATCGGCCATTCTGCTGTCCAATGCCAAATTGCCGACGTCGCTTTGCCACCGAGAATGAGGTGACCAAACACATCGACAACCACATGAATCCGAATACGACAAAACGGCCTCGCCAAAGTAATACGAATAATCCGAATGCGGCCAACGTCAACAATCCGAATGCCAACAGTCATGCTGCCGCCGCCGCAGCCGCAGCCGCTGCCAATCATCTGATGAACGAGACCAAGAATGCGGCACAACAATtcctcaacaacaacaatccgGCAGCGGCAGGTGGCGACAATAAAGCGAATATATTGCCACGCGCAATGGCGGCCGTGCAGAATGCGGCTGTGCAACAGTCGGTGGTCAAGAATGAATTGTACTTCCCGCAGTGTTATGGACCGCCTTTCCAACAAACGTTTCAAACGCAGGGCCAGCCCACAGCGGCGCATAGCGGTGGTGCCGCCTCACAGCCGCCCGTGAATGTGACGGTGCCGAATTCAGTGGCGCCGGGTGTGGTGGTACAACAGAATACGCCCACATCGGTGGTGGCTCAGTGA
Protein Sequence: MAINFSASFAACIAAGLKVPRQIMYCITQDTGQPYVLYKDSQDGERNPAAIGGSAAQWGSEMYPGIQQQAQQHLQAQQQQNGQNPAAQIASAAQAAAAAVAQQQQQQQQQGQQPQSPTGDPRENGGDGVGRQQGSPSTSPYPPQQRVNGGGPPDDDVTMNQVANLQASQQQNSAQSNPNQSNNDPQQHQSSGRDGGTGNPQQQHVQNGGPTQPGQPNDNFQTPQGGELGGYYAPRHPAPQGAMLPPPGFPALHYLNKPVLPGMANAMEQNGGLEGYAMPELLPGGAGGGGDQQGNNGQQNGGAGGNGGNAHNSGANGSGGGEGAVGAAGGAGNGNGAGTGTVGGGTGTGTGTGSGRGRHPNPNKPPKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPYPCSECGKRFRQQSHLTQHLRIHANEKPFTCGYCSRSFRQRAILNQHIRIHSGEKPYACPECGKHFRQKAILNQHVRTHQDVSPNLIFKNGPHPTLWPQDVPYPGDETDTKNDIAGGSGYHDEDSQGTPDGSGGMHYPSYFKDNKGQKILPDVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCLYCPRFFRQRTILNQHIRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQVGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNTTKRPRQSNTNNPNAANVNNPNANSHAAAAAAAAAANHLMNETKNAAQQFLNNNNPAAAGGDNKANILPRAMAAVQNAAVQQSVVKNELYFPQCYGPPFQQTFQTQGQPTAAHSGGAASQPPVNVTVPNSVAPGVVVQQNTPTSVVAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190833;
90% Identity: iTF_00091577;
80% Identity: -