Basic Information

Gene Symbol
Zfy1
Assembly
None
Location
JAPVRH010001175.1:34930-37625[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00088 0.068 13.9 0.9 2 23 365 387 364 387 0.94
2 11 0.38 29 5.6 0.3 1 21 457 477 457 478 0.93
3 11 0.00039 0.03 15.0 1.7 1 23 486 508 486 508 0.96
4 11 8.1e-05 0.0063 17.2 0.3 1 23 512 535 512 535 0.92
5 11 4.5e-06 0.00035 21.1 0.2 2 23 542 563 541 563 0.98
6 11 9.3e-08 7.2e-06 26.5 1.0 1 23 569 591 569 591 0.98
7 11 1.3e-05 0.00098 19.7 3.2 1 23 597 619 597 619 0.99
8 11 0.00026 0.02 15.6 0.6 1 23 625 647 625 647 0.98
9 11 3.3e-06 0.00025 21.6 1.4 1 23 653 675 653 675 0.98
10 11 0.018 1.4 9.8 7.3 1 23 681 703 681 703 0.99
11 11 0.00069 0.053 14.3 2.5 6 23 713 730 710 730 0.97

Sequence Information

Coding Sequence
ATGGaacttgagaaaaaaatcTGTCGCACTTGTTTGGGACTTAGTGGTCCACTACTTTCCATATATGACGGCGGTGGGGGTGGTGGATGTATCGCTGATATGTTGGgagattttacaaaaactaagCCACGACGGGAGGATAAATTGCCTGAAAAGGTTTGTTTGTCTTGTATAAGCGAGATTAATCGTTGCTActcatttaaattgaaatgtgagAACTCGTGCAGAACACTGAGACAACTGGTACCTGATGCTCCTCCAGAAGAAGCGGAAGAGGAGGTATCAAAAGTAAAGGTGGTACAAGTTGATAAGTGTGTACAAACAAAAGCTGAAGTGCCGAAACAACTTACTTCAGTCCACAtccaaacaaaagaaaatgtggTGTCACAGATTAACCAGTATGTACAAACAACaccaatatgtaatataacaCATAATAAATCAACATCCCCCATAATTTtggaacaaaataaaaccttcagatatgacaaaataaaattagaaaaaactttaggtgttgaaattggtgaagaaattgaaattgttgaaagtAGTAAACTGCAACGCCGAAATAATATGCGTCATACTTTATCACTTAAGCGGCGTCGAATAGATGAAAGCTTTGAAGAGGTTGGAGAAGATGGAGCAGAAATTATTATGGAGTTGCATACAGACGAACCGGATATTGTCGATAATTCGGAGGGAATTACATTATATTCGGCACTACATGACACCGTACAGGAAGAAACAAACGATAATACAACCACGTATTACCATTTATCTAATTCGCAGTCTGAAAATGAAAGCGAAAGCGTTGCCGTAAATAATGAGAATATCATAAACGAAACGAACCAATTTAGACAGGGCGATGAAGAATTTGAGGAAGACGGTGTTTATGCACGATTTATATATACCACAGAAGAAAATGAGGTATTTAATACTGGAGATGGGAATACACAATCCGATGATTacaatttcactatttttaaaaatgagaCAGGAGAGGCGGAAGTCTTAGCAAAGCGCACAGTGACACCTCGATCATTAAAGGCGGTAGAAGGAAATAAAGATCGAGGGCTTAAGGAGGAGCTAAAGTGTAGTTATTGTTCGATGACATTTGTTAATCCTAAGCGTTTAGCACGACATGAATTGAAGCGACATGCGagtgaacacacacacagggaAAATGAATCAAACTGCGAAAAGGAGCCGTCCAAGgcaaaaGACCCCTTAGTAAATTCGGAAAATAGTGACGATAATGAAGATAgctcaacaaatttaatcacAACCGATTCGACGAATATAAAAGCTACTACTTCAAACACGCCGCAACCGATTGTACAGAAAACACAACCGGCTAAATTGATTTACTTCTGTGAGACTTGTGGCGCAGGTTTTGCACTAAGAAGATCTATAATTCATCACAGGAAGCAAAATCTTTGCAACAAAACAACCCATGATTGCGACAAGTGCCAACGTGTTTTCATTTCTGAAGAGACACTGAAGGAACACAAGCTAACACATTTGCAAGAACACGAGTGCACCGAATGTGGCAAGCTTTTCGGAACAAATGACGAACTCAGTCAACATATGGTCGAAGTCCATAAACGTAATTTACGCAACCAATGCCCCATTTGCAAGAAAGTTTTTACCATATTGTCGGCACTAAAGGATCATTTGCGTGTGCATAGCGGTGAAAAGCCGTTTGTGTGTGACATATGCAACAAAGGCTTTAGCCAAAAGACGAATTTAAAGCAGCATATAATGCGTCATTCCaaggaaaagaaattcaaatgcGATGAGTGTTCCATGAGTTTTGTTACTAAAGGCGAACTATGCTCACATAAGCGTACACACACCGGCGAACATCCATTCCGCTGCGATGAATGTCTGGCTACATTTACAATATCCAGTTCATTGGTAAAACACAAGCGCATACATACTGGTGAACGACCGTACGCATGCGATTTGTGTCCTAAACGTTTTACATCATCGTTTACTCTAAAAAATCATAGACGCATTCATACCGGCGAAAAACCCTTCAAATGTCGCTGGTGTAGCAAAACATTTACGCAGAAGCAAGATTGCATCATACATCATCGTACTCATACTGGTGAACGAAAtcatgtttgtttttgtggtgagaaatttacacatttgGGTACGTTACGCACTCATATGAAAACACATGAGGCGAATGATGTTGATGGTGTACCGAAAACTGCTAGCAGAGGTAAAAAGCTTTCATCACGTAACAAGAGCAGAACTTCTAAACGTGCAAGTTTGGATGAATCAGCATATAATATCACCATATTGGATGTTGACGAAGACAACGATGATGTCGACGGCGATGAGGAAACAGCTACAGTTGTGACTGTCGCTCGTGAGGATATGGAACGACTGGCAGCAGGTGGTACACTACGACGTAGTGAAGAAGTTGCTGTCAGTGAGGAGAAACTTATGCAACTAGCGATTGAGGAAGTTTAA
Protein Sequence
MELEKKICRTCLGLSGPLLSIYDGGGGGGCIADMLGDFTKTKPRREDKLPEKVCLSCISEINRCYSFKLKCENSCRTLRQLVPDAPPEEAEEEVSKVKVVQVDKCVQTKAEVPKQLTSVHIQTKENVVSQINQYVQTTPICNITHNKSTSPIILEQNKTFRYDKIKLEKTLGVEIGEEIEIVESSKLQRRNNMRHTLSLKRRRIDESFEEVGEDGAEIIMELHTDEPDIVDNSEGITLYSALHDTVQEETNDNTTTYYHLSNSQSENESESVAVNNENIINETNQFRQGDEEFEEDGVYARFIYTTEENEVFNTGDGNTQSDDYNFTIFKNETGEAEVLAKRTVTPRSLKAVEGNKDRGLKEELKCSYCSMTFVNPKRLARHELKRHASEHTHRENESNCEKEPSKAKDPLVNSENSDDNEDSSTNLITTDSTNIKATTSNTPQPIVQKTQPAKLIYFCETCGAGFALRRSIIHHRKQNLCNKTTHDCDKCQRVFISEETLKEHKLTHLQEHECTECGKLFGTNDELSQHMVEVHKRNLRNQCPICKKVFTILSALKDHLRVHSGEKPFVCDICNKGFSQKTNLKQHIMRHSKEKKFKCDECSMSFVTKGELCSHKRTHTGEHPFRCDECLATFTISSSLVKHKRIHTGERPYACDLCPKRFTSSFTLKNHRRIHTGEKPFKCRWCSKTFTQKQDCIIHHRTHTGERNHVCFCGEKFTHLGTLRTHMKTHEANDVDGVPKTASRGKKLSSRNKSRTSKRASLDESAYNITILDVDEDNDDVDGDEETATVVTVAREDMERLAAGGTLRRSEEVAVSEEKLMQLAIEEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00191503;
90% Identity
-
80% Identity
-