Basic Information

Gene Symbol
hang
Assembly
None
Location
JAPVRH010008182.1:86164-97134[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.056 4.3 8.3 1.3 3 23 176 197 175 197 0.93
2 20 0.035 2.7 8.9 3.5 3 22 303 322 301 322 0.90
3 20 0.044 3.4 8.6 1.2 1 22 397 418 397 420 0.90
4 20 1.4 1.1e+02 3.8 0.6 2 21 432 451 431 452 0.93
5 20 3.1 2.4e+02 2.8 1.6 2 23 460 482 459 482 0.88
6 20 0.0023 0.18 12.6 0.2 3 23 547 568 546 568 0.96
7 20 5.5e-05 0.0042 17.7 0.1 1 23 576 599 576 599 0.96
8 20 1.5e-05 0.0012 19.5 0.1 2 23 691 712 690 712 0.97
9 20 0.15 12 6.9 3.2 2 23 779 801 778 801 0.94
10 20 0.0039 0.3 11.9 0.2 2 23 810 832 809 832 0.95
11 20 0.00038 0.029 15.1 0.8 1 23 845 868 845 868 0.98
12 20 0.00012 0.0092 16.7 1.1 1 23 934 956 934 956 0.99
13 20 0.0018 0.14 12.9 0.9 1 23 964 987 964 987 0.96
14 20 0.029 2.2 9.2 0.1 2 20 995 1013 994 1013 0.95
15 20 1.5e-05 0.0012 19.5 0.2 3 23 1085 1105 1084 1105 0.98
16 20 4.9e-05 0.0038 17.9 0.7 1 23 1140 1162 1140 1162 0.97
17 20 0.00012 0.0096 16.6 0.5 2 23 1222 1244 1221 1244 0.92
18 20 0.27 21 6.1 0.3 2 20 1264 1282 1263 1284 0.93
19 20 0.055 4.3 8.3 0.7 3 23 1299 1319 1299 1319 0.98
20 20 0.00078 0.06 14.1 1.0 1 23 1576 1598 1576 1598 0.98

Sequence Information

Coding Sequence
ATAAAACCCGAAGATCACCTATCACTGCGCATTTGTCATTCGTGCATCAGTTACCTGAACTCCTGGCAGAGTTTCAAAAATCGCTGCCTCGCTTCACAAAGCAAGCAACGCAGTTGGTTGGACACGAATAAACGTCAGCAATTGCTCGACAATAATGTCAGCATATCAACGATTGGTGCAGATGGCACCGGCCAACATCAGCACCAAGCGGAGGAGAGTGAACACCAAACAACACCGAGCTTGGCATCATCGATTTTGGATGGAATTTCGTCGTTGAAGAAACGCAAATCTTTAACTGTTTATCCATTGCCAGCAGTAGAAATAAAAGATGAGCCGATGGATCCCGATGATGAATACAACACCAAACAGCATGATGAGTCCGATGATATGGTTGATCCGACGCTATTCTTAGAACGCACCGAAGCGGAGGGTGACGAGGCGCTCATGGAACACATGCCCTATCACTACGAGCCACCGCGACCGCCTATTGAATTAGCCGCACTAGTGGATACCAAAGAAGCCTCCTGTCGCGCTTGCAATCTGAAATTCTCCACACGCGCCAATGCACGCCGCCACGAACGTAATCTGCACCCAAATCTCTTCGAACTATCAACATCGACACCAAACAATATGCCGGTGACCAAACCCACACCCGCTTTGGCAGCCGCACTGGAGCTGCAACGCGCCTCAGCGGCCGCTGCAGCCGCGGCGGAGGCATCGAAAGCCGCTTCAGGCATGATAACACCGCTCAAGTACCGACAGGAAATCGTGAATGCATTCAATAAGTGTGAAATCGGCGGTTTCGATTATGAGCATCCGGAGAAGTACCAACACCATTTGACCGATGAGAAGATCGTTTTCCTACAACAGAACGATGAATTTTTGCGCCAATATCAGAATATGACTTGTCGTTGTTGCAATAAAACTTATTCGACCTATAAGAATTTCATGGCACACATGCGCAAGAAGTATCTTACATTGCCGCGCAATCTTTGCTTCAATTGCCTGAAATTGAACGACTCGAAGGCGTTGTTTATCTCGCATTTGAAGCGACGCAATTGCATCAACTTGTACAAAGTGTTGCATGCGCTCATGGCGAAGGACAGCAATTTCGCCGCTGCGGTGACTGCAACGGCGGCCGCGGTGCCCGACAAGTTGCGCGCCAAGGAGTTGCTCGTTAATAAGATGTACGAATGCAAATTGTGTCCGAAGAAGTATCGCCTGAAGTTGGAGTTCCGTTCGCATGTGTACGACGAACACGCCGACATGCAACGTAAGGACACCATGCAAAAGCAATGTTGCTACTGCGGCTTGGAGTTGGACGATCCAGCCGAACGTAAACGTCACTACAACAATATGGATTGCATTGTGTCGCTGCGCTGCGTTACATGCGATGCCAAGTTCGATAATCATCAGAAATTCCTCGATCACGTTTATGAGAAGCATTTGGCCGGTTTCGGTGAGCAAACGGCCACATCGTCGCAAAATGTCAGTGCCATAAGCACTGAGAATTCACCGGGCAAGAAGTCAACTGTCGGCTTGGGTGGCGCCTCCTCCACAGATGAGTCACGCAGCAGTCATCATGCCGCCTCCGCAAATCAACCGAAATCACAATATTTCTCACGTATGCCACAAGCTTGCCCCATATGCGATCAGCAAtacaataattacaacaatgtGCTGCGCCACATGGAATCCAAACATCCCGACCAATTGCCACAGACATACAAATGCGTCAAGTGCGGCATTGGCTATCCGCGTCTGTCCAATTTGCGCGAGCACATGGTCAGCGCTCATTGCGCAGATAAGGCACGCCATACGGGCtttgaatatattgtaaatgcGGATGCGGTTAAAATCGCCTATGGCACACAACAAAATGTCTACACGGGACGCTATGATTATGTGATGAAGGATTTAATGTCGATAACGAATGGCGGCTCCATTGCTGACGATGATGAGAACTCCAGTGAGAATCCAGTAAAGAAAATGCGCACAGACACCGGTGCCGCTGTGACAACCAACACTGGGTCCGGTGGCAGCGGCGGCAACATGTACAGCAGTCTGAAGGAGTGCCCCATTTGCAATGCCGTCTTTAGCAACAACATCGGACTCTCCAATCACATGCGTTCACATAGTGCGGCGGCTCAGAACAATTCCCTGTCACCGGGAGTGCTAAACCCCAACAAATCGGCACCGAGCGGGCTCACCATCACACCAGCACCACCAACGAAACCCACAACGCCGCCGGCTATGCAACACCAGACGGCAGTACAAAAAGCGATATTCAAGCGTAACTTAGAACAGGCAGCCGATCGACGTTTCCGACGCATGCGCTGCCGGCTGTGTCAGCGTCGTTTCTCATCGAAGAAATCATATCGCTTCCACATGCTCAACGACCATCAAATACGCAATGTACAGTTCATTAAATGCAAGCTATGCGACGCGGAGTTCGCTTACGAGAAGGGCTTGAAGGTGCACATGTTTAAGATACACAATACACTGCTGAAGGACGAGATGATCGAGAAGCAATTTGAATGTGATATTTGTTCGATAGTGTACCGCAGTGAGCCACAGCTGCAGCACCACAAGAAGACTGTGCACGGCAGCGCTGTTGGCGGCGTCGAACAGGCCGACAATACCTTCGATGACAACTTGGccggcggtggtggtggtgctggTGCTGATGCCAGTTCTGCTGTGAATCCGGCCGATCGCTCGGGATTATCGACGCCGGTGAGTAGCGGGGGCGCCGAACGCAGCACACTGGACACCTCAACGAGCGGTCCGCTGTACTGGTACCAGTGCAAGTACTGTCCATCAAACTTCAATACGAACAAGAAGTTGGCTATACACATAAATTCGCATGACGAATTCGATTCGAATGATTATTCGTGCAAGGATTGCGGCAACGTGTATAGCGGACGCAAGAGTTTATGGGTACATCGCTACAAGAAGCATCCACAATTCCCCGAACCTTCGGAATGTGTGCTCTGCAAGAAGGTCTTCTTCGATAGACAGATGCTAGAGAATCACATACCGACCTGTAATCGCAAACCAATTAACGCGGCTGGCGCTGTAGCCGAGAGCGCTGGACCGCCACCCATTTATAAGCATAAAACTGGggatgacgatgacgatgcTTCACACGATGCTAGCGGTGTAATTACGACAAGTGCTTTGGGTGGTGGTGAACTGGAGATTACACCAATACCGGCCAGTGgcatgaaaattaaactacCCGAAGTGGCTTGCACCATATGCGGCCAACGTTTCACCGATCAGGAATTATTCgccaaacacatacaaatgcatgaaATGGAATTGTATACGGATAATCCGTTGGCGGCCATGTTTGATACTGGCCCAGCGGATCcgaatcaattttatttggatCGGGTGAATGATAACGGCGAATACGCCTGCGATTTgtgtaataaaacatttacacaAATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGAACCAAGCCGACGGGGATCCTTCAGCCAGTGCAGCAGCGAACCCATTATCACAGATCCAGATCAACCATCAACATCCACTGGGATTACAAGCAGTGGGCCTTATGCCCAACCCCCATCATCACTCTTCAAAATCCCAGAAGCGCAAACGCGAACTTAAATGCGAGTACTGCCCGTCCACCttcatcagcaacaacaacctgCGTCGTCACATCTATGAATTGCATAAAGAGGAAATCGGTAATTTGCCGGTGCCACCGAAAATCGTTACCGATCCATATTTGAAATGTCGTCGCTGCCAGGAGAAATTCGAAACAAAGAACGACTGGATCGCCCATAAGGTGAGCGATGCGCGTGTTACAAAGCCATTCGGACCCTTCCAGTGGGGTTGCGACTTGTGTGGTGCGTATGTTTCGCGTAAAGAGAAGCTGATCAATCACATACATAATCACTTGAAGGAGAAAGAGATTGTGCCGGTGGAGGAGCAACAGCAGGCGCAtgatcaaaatcaaaatcgtGCAGTGAAGACGAATGcggcgacggcgacggcgacggcgGGTACAGTGGCGCCGATGTCTATTCAAGTTGTAGCTGATGGCGAGGTGAAGGTGAAGCAAGAGCAAGACAGCGATGAGGAGAAGGAGGACTTACATGATGGTGTTCTTAAGAGAGAGGATGAGGAGTATGATGAGGATTATATTGTTGGTGAGGCGGATGGTGAGGTAGAGGAGGGTGAATCGGTACGCCAGAGTGTTAGTGCGGTACGTCGATCTGGTATGGTCACCGACGATGACGTCGATGAGGATGCTTCGGAAGAGGAGGCagatgaagatgaagaatATGATGATATTGGTCAATTGATACAAATGGACATGAATGCGCAAGCCGACGGTGAGGCGGCAGAAGCCGATGAGGATGACGCCGATGATGCCGAGGAGGGTGTGGAAGATGCAGACGATGCCGATGACGTAGATATGGATAATGAAGAAGACTCCAATGGTCGGACTATTACTGCACCGAATGGGCGTACTTACGCGCGCGTGCCACCTGCCGCAACACAAATTACCATCGAATCAAATCGCATTTCAACAGATACAACCGAAGACTCGTCGCCGTCGTATGATGAGGACGACGATGATTCGGATGACGATAGTGATGCAGAGAGCGGCGACAGTTCATCGCAGGCATCGAAGACACCGGCGCCGGCGCCAAAAGTACGCTTCTCCTGCGACCTCTGTCGCGTGTTCTTCGATTCGCAACAAGAGCTGCAAAAGCATGTAAAAATGCATTTCCTTAATGGGCCCGGCTCGGTGTCGTTAACCGAAATCAAGCCAAAGACGGGCAACAAGTCGagccgcagcagcagcagtgacGTGGTGACGGTGTAG
Protein Sequence
IKPEDHLSLRICHSCISYLNSWQSFKNRCLASQSKQRSWLDTNKRQQLLDNNVSISTIGADGTGQHQHQAEESEHQTTPSLASSILDGISSLKKRKSLTVYPLPAVEIKDEPMDPDDEYNTKQHDESDDMVDPTLFLERTEAEGDEALMEHMPYHYEPPRPPIELAALVDTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPNNMPVTKPTPALAAALELQRASAAAAAAAEASKAASGMITPLKYRQEIVNAFNKCEIGGFDYEHPEKYQHHLTDEKIVFLQQNDEFLRQYQNMTCRCCNKTYSTYKNFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKDSNFAAAVTATAAAVPDKLRAKELLVNKMYECKLCPKKYRLKLEFRSHVYDEHADMQRKDTMQKQCCYCGLELDDPAERKRHYNNMDCIVSLRCVTCDAKFDNHQKFLDHVYEKHLAGFGEQTATSSQNVSAISTENSPGKKSTVGLGGASSTDESRSSHHAASANQPKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSAHCADKARHTGFEYIVNADAVKIAYGTQQNVYTGRYDYVMKDLMSITNGGSIADDDENSSENPVKKMRTDTGAAVTTNTGSGGSGGNMYSSLKECPICNAVFSNNIGLSNHMRSHSAAAQNNSLSPGVLNPNKSAPSGLTITPAPPTKPTTPPAMQHQTAVQKAIFKRNLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIEKQFECDICSIVYRSEPQLQHHKKTVHGSAVGGVEQADNTFDDNLAGGGGGAGADASSAVNPADRSGLSTPVSSGGAERSTLDTSTSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFPEPSECVLCKKVFFDRQMLENHIPTCNRKPINAAGAVAESAGPPPIYKHKTGDDDDDASHDASGVITTSALGGGELEITPIPASGMKIKLPEVACTICGQRFTDQELFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCNKTFTQMTALKVHRKWHFRGDSKQNQADGDPSASAAANPLSQIQINHQHPLGLQAVGLMPNPHHHSSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKEEIGNLPVPPKIVTDPYLKCRRCQEKFETKNDWIAHKVSDARVTKPFGPFQWGCDLCGAYVSRKEKLINHIHNHLKEKEIVPVEEQQQAHDQNQNRAVKTNAATATATAGTVAPMSIQVVADGEVKVKQEQDSDEEKEDLHDGVLKREDEEYDEDYIVGEADGEVEEGESVRQSVSAVRRSGMVTDDDVDEDASEEEADEDEEYDDIGQLIQMDMNAQADGEAAEADEDDADDAEEGVEDADDADDVDMDNEEDSNGRTITAPNGRTYARVPPAATQITIESNRISTDTTEDSSPSYDEDDDDSDDDSDAESGDSSSQASKTPAPAPKVRFSCDLCRVFFDSQQELQKHVKMHFLNGPGSVSLTEIKPKTGNKSSRSSSSDVVTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00303948;
90% Identity
iTF_00191500;
80% Identity
-