Basic Information

Gene Symbol
Mblk-1
Assembly
None
Location
JAPVRH010008354.1:17259-20225[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3 6e+03 -2.7 0.0 1 16 14 29 14 29 0.87
2 2 2.2e-18 4.4e-15 55.4 0.0 1 43 539 582 539 584 0.95

Sequence Information

Coding Sequence
ATGCGCGCCACGCCCAAACTCTCTTCACGTCGCCCCTGCACCGATGATGCGCTCAGCAGCGCCGTACAAGAATTTCTCAGTGGAAAGTATAATGCACGCAAACCGCCAGAGCAGTATGCCAGCACTTCGAGCGCAAGCCCAGGACGCGCCAGATCCAATCGCGCCGGAGTGAGTGGCAAACGCGCCAATGCGCACCTCGCCAACGCGCTCTTACACGGCATGGACGTGGACAAGGATATGTCCGGCGATGAGTGCAGCACTGGCGATATTAATGCAGGCATAGCCGGCGGACATGGGAGTAATGCATCGACGCCACAACCAGAAACCGCCACACACACCGCGCTGGAGGAGCTTACCAACCGGCTGAACGCAACGCATTCCTTGCGTAAATATTGCGTGAATAATGGCAGCGGTGATGCGGGGCGACGTGATGGCGCCAATGATGCCACCAGTTGCAGCGATTTTTCACCAAAGCCGAACGCAATGTACGTAGATGGCGCTAAGTGTGACGCCGGTACACCGTCGAGCAGCGCTACGCCACAACCGCAGCAGTCACCGCCAGCGGCTGGTCTCGATCCCACATTAGCGATTTTGCAGGCATTCCTCTTTACGCTCACCAGCTTTGGCGCTTTGCAGCAACGTGCCGATCAGCCCGTAACGCTGCGTGATCTGGTGGCCAACTTGAAGGATATGTTGGAAACACATACGGCGGGTGATTTGAGTGTGGAGGGTCTTTTCAGCAATGGCAAGCCCAATATAATGGATCAATCGTTACTGGCGCaaaagctgcaacaacaaacgtcATCATATGCGGCACAGCGTTTACCGAAATCAGATACACCAGAGACCACAAGTTCGTTGGACCATCATGAGCCAATTGGTGACGATCTGGCTGCGTCGATTCTTAAGATTCCGTCCTATAAGCCAGTGGCTGGCACGCCGACGCCCACGTCGACTGCAGCACGCGCCTCATGCTCGCCATCCCTGCTGTGCAACAATTCCACCGCCAACTCCATGCCAAATCCCAATGGCGATAGTCCGCATTCCGCGCCCTCACCACGCATCGCCAACTCCATGCTGGCCGCTGCTGTGGCGGCCGCGAGCAACAATGGCACCGTTGCATCTGCCGGTCGTCAGAGCAATGACCTGTCTGTCATTTCGCCGCCATTAATGCAGCACCGCCAATCACCACCGCCGTTCAGTTTTCGCGATATGATCGCGCATGGCATTCACCGCACTATGAACGAGCAAGCCAATCAGGAGGCGCATGCTGCGGCTGCTGCAGTGGCTGCCGCTTCAGCGCCCATGCTCGGCTTGTGTTTGGATATGGAGCGCTCGACTAATAACAATAGCGGCAGCAGTGCGGATCATAAGAAACCGACTATATCGGTGGTGAAGAATATAGGTGGCACCGATACAACACGGTTTGGTGCTGCACCCAATGTCTTGGCTGGTTCCAGTGTAGCTGGTAGCAGTAGCACCACGCACAATTCACATGGCTATCATCAGGCGCACATGCATCATCATCTGCCGCACCACCTGAGTCGCCAGGAGGCAGCAGCGCTAGCCGCCGGGAAAGGCACCCGACCCAAACGTGGCAAATACCGCAACTATGACCGCGATAGTTTAATCGAAGCAGTGCGCGCTGTGCAACGCGGCGAAATGTCGGTGCACCGTGCAGGCAGCTACTTCGGCGTGCCACATTCAACACTCGAGTACAAAGTTAAGGAGCGACATTTAATGCGGCCGCGTAAACGTGAGCCCAAACCACAGCCTGGACTAGACGGCAGCAGTAGCACGACAACGAGCAAATCAAGCTCCAACATTCCTGGTCATCACAACAATCTGAGCAAAATCAAGTTGGGCAACGCTGGCAGCAGTGGTGTCAATTCGAAGCTCAACGAAGCGCATAAAAGCAATAGTAACCCAGCGGCTGCCGCATTCCCAACCAGCGCACCGAACGGCATGAAATTGCCGCTCTTCGATCCCATCCAATACCCGGCACATCTATTTTGGAATCCCTCGCCAGCTGTAGCCTTTAGCCAAATGCATATGGAATTCAATCGCAATGCAGTGGCGGCGCAAAACGCCAGCGCGGCAAGCGCGGCACAACGCTACACCGAAGAAACGTTGCGTGCCGTTGGCGCCACATCGGCTGGCACGCCTTCAAATGCCAACAGCCCCAGTCCTATTGCCAGTCCGTTGTCCGCTGCGGTAAGTCACACACTCAATATGAAGAGCGCGCGTGAAATTGCGGagaatttgtatgaaaacgCTGGCGCCAATGGTTCCTCAATACTCGACGGCATCATACGGAAAACGCTCGATCGCAAAAGCACCGACGTGGGACCGCCAAACAGCGCCAGCAGCGGCGGCGCACTGCTCGACCAGTTACTGGTCAAAAAAAGTGCGCTACCGCCATACGCCAGCAACAACACTAACGATCATCGCTCACCAAACGCCATGAGCAGCCTACGCGCTAAGCGCGCCGCCAGCCCGCTTGCATATACTGAAATCAAACGTGAACGCGGCAGTCCGCCACACAGCAGCGGTGACGACGATGATGACGACGCCTCACGCAGCGGCAACGATGAAAGCTGCTAcgagcacaacaacaataacaacagcaaaagtaGCTACATCGGCAACAGTGAGTTACACCAGCAGCATCAGCATTTGCACCATCAGCAACACAGTCGTAGCCGCAGCCGCTTAACCTCCCACGACTCCGCCGAAACCGATACGAGCAGCATACCCAGCGAGCTTATACccaaccacaacaacagcaacctaCCGCAAATTGTCGCCGACCTAAATGGCGGTAGCGCGGCGGTGAGCGGTATCTTACCCAAAGTGGAACTGCCGCTAGAATTCGTGCACGCGCCGCCCGTGCTGGGTAGCACATCAATACTACATGAAAAGTTGGCGCAAATCAAGGCCGAGCAGGAGAGCGAAGAGCACTTATAG
Protein Sequence
MRATPKLSSRRPCTDDALSSAVQEFLSGKYNARKPPEQYASTSSASPGRARSNRAGVSGKRANAHLANALLHGMDVDKDMSGDECSTGDINAGIAGGHGSNASTPQPETATHTALEELTNRLNATHSLRKYCVNNGSGDAGRRDGANDATSCSDFSPKPNAMYVDGAKCDAGTPSSSATPQPQQSPPAAGLDPTLAILQAFLFTLTSFGALQQRADQPVTLRDLVANLKDMLETHTAGDLSVEGLFSNGKPNIMDQSLLAQKLQQQTSSYAAQRLPKSDTPETTSSLDHHEPIGDDLAASILKIPSYKPVAGTPTPTSTAARASCSPSLLCNNSTANSMPNPNGDSPHSAPSPRIANSMLAAAVAAASNNGTVASAGRQSNDLSVISPPLMQHRQSPPPFSFRDMIAHGIHRTMNEQANQEAHAAAAAVAAASAPMLGLCLDMERSTNNNSGSSADHKKPTISVVKNIGGTDTTRFGAAPNVLAGSSVAGSSSTTHNSHGYHQAHMHHHLPHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSYFGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSSTTTSKSSSNIPGHHNNLSKIKLGNAGSSGVNSKLNEAHKSNSNPAAAAFPTSAPNGMKLPLFDPIQYPAHLFWNPSPAVAFSQMHMEFNRNAVAAQNASAASAAQRYTEETLRAVGATSAGTPSNANSPSPIASPLSAAVSHTLNMKSAREIAENLYENAGANGSSILDGIIRKTLDRKSTDVGPPNSASSGGALLDQLLVKKSALPPYASNNTNDHRSPNAMSSLRAKRAASPLAYTEIKRERGSPPHSSGDDDDDDASRSGNDESCYEHNNNNNSKSSYIGNSELHQQHQHLHHQQHSRSRSRLTSHDSAETDTSSIPSELIPNHNNSNLPQIVADLNGGSAAVSGILPKVELPLEFVHAPPVLGSTSILHEKLAQIKAEQESEEHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00189865;
90% Identity
iTF_00189865;
80% Identity
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