Basic Information

Gene Symbol
Xbp1
Assembly
None
Location
JAPVRH010000798.1:104887-106465[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-12 2.6e-09 37.2 21.4 2 65 72 135 72 156 0.80

Sequence Information

Coding Sequence
ATGGCAGCGACAGCGCCAGCCGTTTTTATAACTGTGCCCAAGTACGTGGCtataacacacacaccaacCATGACATTACCAAAGATAAGGCCAGCACCAACAACCACGTCATTGCAAGGAACAACAGCATTAGCAACTAATGGGAATGCGATGATTGACGATGGTGCTTCAGTGCCAAGGGGCAAGAAGCGCCGCCTTGACCATCTCACTTGGGAAGAGAAAATACAAAGAAAaaaattaaagaatcgTGTAGCCGCACAAACATCACGCGACCGTAAGAAAGCACGAATGGAAGACATGGAACACGAAATAGATGAACTGACGcagaaaacagaaattttgcaaaataaatgtgaaagctTACAAGCAATTAATGAATCGCTTCTTGAGAAAAATCGCAAATTGGATATGGAAGTGGAACTTCTCCGTGAAAAACTCAACGaggtgcaacaacaacagaagaaACAACAGGAGGAACTAGCAAATAATGCCGCCaaaataaaggcaaaaaaagTTGAATCTTGTGCCGGCTCAGGGATCATCTCAAATGGACTCTCAGTCGACAGAAGAACAACTGAAAAAGAGCAACTCAGTGGCGTCACTATGGAGGATTATTGCACTTTGCCTACTCTTCAAGATATGCTCCTCGTCGACGAAGAATTCGATGCCAGCAAATTGGAAGAACTTGCCGAAAGCCTCTTGGCCGATATCGCAGCAGACATGGAAGCTAGTGATGGAGCGAGCAATGAAAATGATGCCAAAGTTGCAAGCAACGCAGAGCGACTGTCTGGATCAGTGGTGGGGCCCAAAACAAAGTGCTTGGAATCCAGccaacatacaaacacacaaagtGTCAGCTTAAATGATCCAAAGTGGTCATCTACAAAAAATGATGCAAAACGACTACAAAATAAACCACCTGCACCGATAGATGAGTTAAAAGCTGAGCCAAACAGTAAACCTACAATTGCAttaccaacaacaaagccTGCAATAACTACAGACAAGGAAATCTTTAGAATACAACAAGCAACTGATATCAATTCAATACCGCCGGATACGGTGTATGGTACATACGATGCCAAAACAAATTCTATAACAATCGTAATGGATGACGATGCAGTGCCAGTTAATGAGGCCGTTGAAGAAATATACTCTGATGGTGTAACACCACAAACCAGtgacgaaataaaatatcccACACCCGCGACCACACCCTCACATGTTTTTCTCAGTGTGGTCGATGATTCGGACGATGATTTTAACTTCGATCCTATAGAGCGATTTCTGCGACCTAAGTGCCCGCTAGCGAAATCACCTGCACCGTCACTACATTCAACCGCCTCAGATCATGGTTATGAATCTATCATTGGTTCACCAACGTCTACAGCGACAGAACAGTTCGATACGAGTGTTGAAGATTTCTGCTGGCAGGATAGTTTTAACGATTTGTTTCCGAGTTTGGTCTAA
Protein Sequence
MAATAPAVFITVPKYVAITHTPTMTLPKIRPAPTTTSLQGTTALATNGNAMIDDGASVPRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKARMEDMEHEIDELTQKTEILQNKCESLQAINESLLEKNRKLDMEVELLREKLNEVQQQQKKQQEELANNAAKIKAKKVESCAGSGIISNGLSVDRRTTEKEQLSGVTMEDYCTLPTLQDMLLVDEEFDASKLEELAESLLADIAADMEASDGASNENDAKVASNAERLSGSVVGPKTKCLESSQHTNTQSVSLNDPKWSSTKNDAKRLQNKPPAPIDELKAEPNSKPTIALPTTKPAITTDKEIFRIQQATDINSIPPDTVYGTYDAKTNSITIVMDDDAVPVNEAVEEIYSDGVTPQTSDEIKYPTPATTPSHVFLSVVDDSDDDFNFDPIERFLRPKCPLAKSPAPSLHSTASDHGYESIIGSPTSTATEQFDTSVEDFCWQDSFNDLFPSLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-